Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0921
(633 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit S... 162 3e-41
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 56 4e-09
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 41 2e-04
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 34 0.020
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 33 0.045
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 31 0.14
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 31 0.14
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 31 0.18
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 31 0.18
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 31 0.18
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 30 0.24
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 30 0.24
SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p... 30 0.24
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 30 0.24
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 29 0.42
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 29 0.56
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 29 0.56
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 29 0.56
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 29 0.74
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 28 0.97
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 28 0.97
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 28 0.97
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 28 1.3
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 27 1.7
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 27 1.7
SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|c... 27 2.3
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 27 2.3
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 26 3.9
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 26 3.9
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 26 5.2
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 26 5.2
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 26 5.2
SPBC3B9.15c |scp1||sterol regulatory element binding protein Scp... 26 5.2
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 25 6.9
SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 25 9.1
>SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit
Sop2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 377
Score = 162 bits (394), Expect = 3e-41
Identities = 69/127 (54%), Positives = 92/127 (72%), Gaps = 1/127 (0%)
Frame = +2
Query: 251 TNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGK 430
T N+V +Y+++GN WK +HD V +DWAP +NRIVTCS DRNAYV+ + DG
Sbjct: 30 TATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT 89
Query: 431 WATTLVLLRINRAATCVKWSPMENKF-LSVRS*IDIICYFEXGNNWWVSKHIKKPIRSTV 607
W TLVLLR+NRAAT V+WSP E+KF + + + +CYFE N+WWVSKH+K+P+RST+
Sbjct: 90 WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTI 149
Query: 608 TSIDWLP 628
S+DW P
Sbjct: 150 LSLDWHP 156
Score = 31.5 bits (68), Expect = 0.10
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 275 YKKEGNDWKQTNNLVEHDLR--VMGIDWAPNTNRIVTCSVDRNAYV 406
Y ++ NDW + +L + LR ++ +DW PN + DR AYV
Sbjct: 128 YFEQENDWWVSKHL-KRPLRSTILSLDWHPNNVLLAAGCADRKAYV 172
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 56.0 bits (129), Expect = 4e-09
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = +2
Query: 266 VHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTL 445
V I +K +DW+ T L H+ V I W+ N N + TCS D++ ++W +D ++
Sbjct: 358 VSINEKIDDDWECTAALEGHENEVKCIAWSCNGNYLATCSRDKSVWIWEATEDDEFDCLA 417
Query: 446 VLLRINRAATCVKWSPMENKFLSVRS*IDIICYF-EXGNNW 565
VL + V W P E+ +S S + IC++ + G++W
Sbjct: 418 VLQEHTQDVKVVTWHPTEDLLVS-GSYDNSICFWRDDGDDW 457
Score = 41.5 bits (93), Expect = 1e-04
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +2
Query: 257 NNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWA 436
+N + ++ +G+DW T L H V + ++PN N + + D N ++W + +
Sbjct: 444 DNSICFWRDDGDDWALTCQLQGHTNTVWALAFSPNGNTLASADNDGNVFLWIKISSNEDV 503
Query: 437 TTLVLLRINRAATCVKW 487
T+ I R A +W
Sbjct: 504 ATIDSTNILRPALQEEW 520
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 40.7 bits (91), Expect = 2e-04
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Frame = +2
Query: 290 NDWKQTNNLVEHDLRVMGIDWAPNTNR----IVTCSVDRNAYVWTQGDDGKW-ATTLVLL 454
N+W + L H + WAP+ + + S D+N ++WT+ DG W T L
Sbjct: 193 NNWILEDTLAGHVDWTRDVAWAPSVGLTKTYLASASQDKNVFIWTKEGDGPWQKTPLTEE 252
Query: 455 RINRAATCVKWSPMENKFLSVRS*IDIICYFEXGNNWW 568
+ A V WS + L+V + + F+ N W
Sbjct: 253 KFPDIAWRVSWS-LSGNILAVSCGDNKVYLFKESQNKW 289
Score = 31.9 bits (69), Expect = 0.079
Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Frame = +2
Query: 257 NNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNT-NRIVTC-SVDRNAYVWTQGDDGK 430
+ V ++++ G W + + H V + WAP+ ++ C S D V DDG
Sbjct: 76 DGHVIVWRETGGVWSELMDHTAHQASVNAVSWAPHEYGALLACASSDGKVSVLEFKDDGS 135
Query: 431 WATTLVLLRINRAATCVKWSP 493
T + V WSP
Sbjct: 136 -CDTRIFTAHEPGCNAVCWSP 155
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 33.9 bits (74), Expect = 0.020
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 311 NLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 409
NL H L V+ +D + ++ +VTCS D+N +W
Sbjct: 571 NLYGHKLPVLSMDISYDSKLLVTCSADKNVKIW 603
Score = 28.3 bits (60), Expect = 0.97
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 311 NLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLR 457
++ H +M + + P+T TCS DR W DGK ++ LR
Sbjct: 613 SIFAHQDSIMEVTFQPDTYNFFTCSKDREVRYW----DGKSFDLILKLR 657
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 32.7 bits (71), Expect = 0.045
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 314 LVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW-TQGDDGKWATT 442
L+ H+ VM +DW P I++ S D + VW + G W T
Sbjct: 264 LMGHEDWVMSVDWHPTKEMILSSSADSSMIVWEPDTNTGIWVVT 307
Score = 29.9 bits (64), Expect = 0.32
Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 2/117 (1%)
Frame = +2
Query: 284 EGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRI- 460
E W Q L H L V I ++P+ I++ DR + Q ++ ++
Sbjct: 564 ETQSWNQQQVLKGHSLTVTTIKFSPDDRYILSAGRDRLVCLHEQAENLLDYNNFASIKAH 623
Query: 461 NRAATCVKWSPME-NKFLSVRS*IDIICYFEXGNNWWVSKHIKKPIRSTVTSIDWLP 628
+R W+P E F + S + +++ +N + VT++D+ P
Sbjct: 624 SRIIWDASWAPKEMGYFFATASRDKFVKFWKINDNKKICDVAALQFSDAVTAVDFAP 680
Score = 27.5 bits (58), Expect = 1.7
Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 272 IYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQ-GDDGKW 433
++K++ W Q ++ H V G+ W P ++ D+ ++ + D W
Sbjct: 352 LWKQDAGQWLQLPSISGHTKSVKGVAWDPEGKFYLSAGTDQTTRLFARFKKDNAW 406
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 31.1 bits (67), Expect = 0.14
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +2
Query: 314 LVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSP 493
L H+ V+ ++++PN + +C D+ +W + K +L+ + CV+W P
Sbjct: 217 LAAHNGVVLCVNYSPNGVFLASCGRDKTIRIWDSTSNKK--KSLITINNVSPLNCVRWRP 274
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 31.1 bits (67), Expect = 0.14
Identities = 18/89 (20%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +2
Query: 251 TNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGK 430
+++N ++ + G ++ +L H V + ++PN R + D YV+ DGK
Sbjct: 166 SDDNSINFF--HGTPYRFNRSLRVHSKFVYDVRYSPNDERFASAGADGKVYVF----DGK 219
Query: 431 WATTLVLLRINRAAT-CVKWSPMENKFLS 514
+ + ++ + + WSP ++F++
Sbjct: 220 TGDQVYEIDAHKGSIFSISWSPDSSQFVT 248
Score = 29.9 bits (64), Expect = 0.32
Identities = 11/46 (23%), Positives = 22/46 (47%)
Frame = +2
Query: 272 IYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 409
+Y +G Q + H + I W+P++++ VT S + +W
Sbjct: 213 VYVFDGKTGDQVYEIDAHKGSIFSISWSPDSSQFVTSSAGYSCKIW 258
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/50 (24%), Positives = 20/50 (40%)
Frame = +2
Query: 254 NNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAY 403
N V I+ G D N + R+ +DW ++ RI+ + Y
Sbjct: 78 NQGNVRIWDCAGEDKILKNQVTAISGRITDLDWDGDSQRIIAVGEGKERY 127
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 30.7 bits (66), Expect = 0.18
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 320 EHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDD 424
EH+L +G+ W+ N+ + S D+N YVW+ D
Sbjct: 269 EHNL--LGVAWSRNSRFVGAGSSDKNVYVWSATGD 301
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 30.7 bits (66), Expect = 0.18
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = +2
Query: 266 VHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTL 445
+ +YK +G T + HD ++ + + + ++T S D +W++GD G + L
Sbjct: 369 LRVYKVDGKAPVSTVSHA-HDNSIVALRYNLRISLLLTASSDTTVKLWSRGDAGAF-ECL 426
Query: 446 VLLRINRAATCVKWSPME 499
+ + C+ W+ E
Sbjct: 427 HVFSFSSPVNCIDWNLRE 444
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 30.7 bits (66), Expect = 0.18
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +2
Query: 344 IDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFLSV 517
+DW+ N N +V +++RN YVW D G + L + VKWS + FLSV
Sbjct: 186 LDWS-NLN-VVAVALERNVYVW-NADSGS-VSALAETDESTYVASVKWS-HDGSFLSV 238
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 30.3 bits (65), Expect = 0.24
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -3
Query: 568 PPIISXLKIANDINLAPDRQKLVLHGRPFHASRCSVDTQKNKSSCPFP 425
PP I L ++ LAP H P H S+ +V Q + SS P P
Sbjct: 250 PPSIPLLGSQTNLQLAPSFAAPQAHPLPSHLSQSNVPPQLSHSSVPSP 297
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 30.3 bits (65), Expect = 0.24
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +2
Query: 299 KQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWT 412
K +L H+ +V +DW+P+ R+ + D+ +W+
Sbjct: 464 KMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIWS 501
>SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 352
Score = 30.3 bits (65), Expect = 0.24
Identities = 13/51 (25%), Positives = 29/51 (56%)
Frame = +2
Query: 257 NNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 409
+++V IY+ + L EH V+ ++W+ + ++ + SVD++A V+
Sbjct: 51 DSKVRIYEVQATGQSIGKALYEHQGPVLSVNWSRDGTKVASGSVDKSAKVF 101
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 30.3 bits (65), Expect = 0.24
Identities = 10/44 (22%), Positives = 23/44 (52%)
Frame = +2
Query: 278 KKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 409
+K +W+ L+ HD + + W+ ++ +V+ +D + VW
Sbjct: 118 EKHTENWRSYRRLLGHDNDIQDLCWSYDSQLVVSVGLDSSIIVW 161
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 29.5 bits (63), Expect = 0.42
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 299 KQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 409
K+ L+ H V I W+P+ +++CS D++ +W
Sbjct: 246 KRVFRLIGHIDTVAYIRWSPDDRYLLSCSCDKSVILW 282
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 29.1 bits (62), Expect = 0.56
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2
Query: 251 TNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQ 415
TNN + + N+ Q ++L+ H V G+ +P I++CS D +W++
Sbjct: 379 TNNGPQPLVGSQ-NEPLQKSSLIGHTRPVFGVSISPQKEFILSCSEDGFTRLWSK 432
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 29.1 bits (62), Expect = 0.56
Identities = 18/77 (23%), Positives = 32/77 (41%)
Frame = +2
Query: 263 EVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATT 442
+V+++ E N+++ N +H +P+ I SVD VW D K +
Sbjct: 82 DVYVWNPETNEFRDLGNNAQHPSECWSSCISPDGQTIAFTSVDGRIAVWDNPSDCKISE- 140
Query: 443 LVLLRINRAATCVKWSP 493
L + C+ +SP
Sbjct: 141 --LDTKGKFGLCIDYSP 155
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 29.1 bits (62), Expect = 0.56
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 323 HDLRVMGIDWAPNTNRIVTCSVDRNAYVWT 412
H VMG+ TN + +CS DR+ VW+
Sbjct: 249 HRDAVMGLAMRRGTNEMFSCSADRSIKVWS 278
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 28.7 bits (61), Expect = 0.74
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 314 LVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 409
L EH +++ + W+PN ++ T S D +W
Sbjct: 345 LDEHIRQIVAMAWSPNGYQLATSSADDTVKIW 376
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 28.3 bits (60), Expect = 0.97
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = -3
Query: 520 PDRQKLVLHGRPFHASRCSVDTQKNKSSCPF-----PIISLSPDVSITVNRTRNNTVGVG 356
PD + P A+ C + + SS P IS PD T++ + ++ + +G
Sbjct: 121 PDSHDSPNNSIPLMANSCLLSADNSSSSTTSNPNVAPPISTLPDPVATISSSSSSHLDMG 180
Query: 355 SPINPHHSKVVFH 317
+ PHHS + H
Sbjct: 181 AIHPPHHSSLPPH 193
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 28.3 bits (60), Expect = 0.97
Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +2
Query: 242 CIXTNNNEVHIYKKEGNDWKQTNNLVEHDLRVM---GIDWAPNTNRIVTCSVDRNAYVW 409
C+ T+ N+VH+ W+ TN + ++ + + N I + S + YVW
Sbjct: 115 CVVTSKNQVHLLSLSKGSWEVTNTISCEKTPLLFCATVQISGNEIYIASASAFQQIYVW 173
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 28.3 bits (60), Expect = 0.97
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 448 NKSSCPFPIISLSPDVSITVNRTRNNTVGVGSPINPH 338
NK S I SLSP ++ + N ++ +G+ +NPH
Sbjct: 408 NKESIKQRIPSLSPPITRSYNAKHRPSLVLGTSVNPH 444
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 27.9 bits (59), Expect = 1.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 323 HDLRVMGIDWAPNTNRIVTCSVDRNAYVW 409
H++ V + ++PN ++ VT S D + VW
Sbjct: 163 HEMEVRDVAFSPNDSKFVTASDDGSLKVW 191
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 27.5 bits (58), Expect = 1.7
Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 356 PNTNRIVTCSVDRNAYVWTQGDDGKWATTLVL-LRINRAATCV 481
P +N IVTCS D ++W + + T+ L +++ ++ C+
Sbjct: 303 PPSNNIVTCSTDGLVHIWEPDMFSRPSETICLSSQVDSSSQCI 345
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 27.5 bits (58), Expect = 1.7
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +2
Query: 314 LVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWT 412
L+ H V G ++P+ +++CS D +A +W+
Sbjct: 375 LLSHSGPVYGTTFSPDNKYLLSCSEDASARLWS 407
>SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 260 NEVHIYKKEGND-WKQTNNLVEHDLRVMGIDWAPN 361
N+ +IYK+ + WK+ L H + I WAP+
Sbjct: 192 NDAYIYKQNSHGKWKKVAELPGHTDLIRDICWAPS 226
Score = 26.2 bits (55), Expect = 3.9
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Frame = +2
Query: 368 RIVTCSVDRNAYVWTQGDDGK-WATTLVLLRINRAATCVKWS-PMENKFLSVRS*ID--I 535
R+V+CS D+ V+ DD + WA T + + V W+ P + L+V S +D +
Sbjct: 28 RMVSCSADQRVKVYDFNDDTETWAITSEWRAGDASLMRVAWAHPSFGQVLAVCS-LDRGV 86
Query: 536 ICYFEXGNNW----WVSKHIKKPIRSTVTSIDWLP 628
Y E N+ WV RS V I + P
Sbjct: 87 RIYEEQKKNFESKTWVEVAKLMDARSAVLDISFCP 121
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 547 KIANDINLAPDRQKLVLHGRPFHASRCSVD 458
K++ND +L PD K + HAS+ S+D
Sbjct: 873 KVSNDSHLKPDADKKSVSSELTHASKPSLD 902
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 26.2 bits (55), Expect = 3.9
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +2
Query: 104 VVSPQLLQFHKNSGI*SEIENGTNVN-FW*LMRADNMSCMEQG*KSNCIXTNNNEVHI-- 274
+ P L KN I +++ G N+N + +A +QG K + I T + HI
Sbjct: 98 IAIPHLSLEDKNEDIWTKVV-GINLNGAYYTAQAAGHHFKKQG-KGSLIFTASMSGHIAN 155
Query: 275 YKKEGNDWKQTNNLVEHDLRVMGIDWAP 358
+ ++ + T V+H R + ++WAP
Sbjct: 156 WPQQWASYHATKAAVKHLARALAVEWAP 183
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 26.2 bits (55), Expect = 3.9
Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 323 HDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAAT-CVKWSPME 499
H+ + G+ W + ++ + D N +VW D + + L + AA + WSP +
Sbjct: 248 HEQEICGLQWDRSLGQLASGGNDNNLFVW----DYRSSRPLHKFEEHTAAVKAIGWSPHQ 303
Query: 500 NKFLS 514
L+
Sbjct: 304 RGILA 308
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 25.8 bits (54), Expect = 5.2
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 323 HDLRVMGIDWAPNTNRIVTCSVDRNAYVW 409
H LR+ + + P N ++ S+D++ VW
Sbjct: 546 HSLRIYSVLYEPERNICISGSMDKSIRVW 574
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -3
Query: 409 PDVSITVNRTRNNTVGVGSPINPHHSKVVFHKVVCLLP 296
PD I R R+++ + I+PHHS+ + ++ +P
Sbjct: 472 PDSDICFTRRRSDSNRTWTVIDPHHSQSFDNDILAEIP 509
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +2
Query: 425 GKWATTLVLLRINRAATCVKWSPMENKFLSVRS*IDII 538
GK +V++R+N +WS EN++ + +D +
Sbjct: 329 GKADGDVVMVRVNNDVEAYQWSQKENEWKKIGQVVDAV 366
>SPBC3B9.15c |scp1||sterol regulatory element binding protein
Scp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1086
Score = 25.8 bits (54), Expect = 5.2
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 317 VEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVL 451
V H L ++ I + N + +DR VW D +W T LVL
Sbjct: 592 VHHQLDILKIAVSENYKTFASVGLDRCLVVW---DLRQWCTKLVL 633
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 25.4 bits (53), Expect = 6.9
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +2
Query: 314 LVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAAT-CVKWS 490
L H V G++W N N + + D VW + ++ L + AA + WS
Sbjct: 370 LTAHRQEVCGLEWNSNENLLASGGNDNALMVWDKFEE----KPLYSFHNHIAAVKAITWS 425
Query: 491 PMENKFLS 514
P + L+
Sbjct: 426 PHQRGILA 433
>SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 578
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 243 QFDFYPCSMHDMLSARMSHQKLT 175
QF F PCS+HD+LS+ + K T
Sbjct: 182 QFPF-PCSLHDVLSSYLYLLKST 203
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,676,107
Number of Sequences: 5004
Number of extensions: 55819
Number of successful extensions: 202
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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