Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0921
(633 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical ... 155 2e-38
AL034393-7|CAA22322.2| 337|Caenorhabditis elegans Hypothetical ... 48 4e-06
AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore... 42 5e-04
AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore... 42 5e-04
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 37 0.010
AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily a... 37 0.010
Z35663-5|CAA84727.1| 681|Caenorhabditis elegans Hypothetical pr... 34 0.074
U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical pr... 34 0.097
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 34 0.097
Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 32 0.30
U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated p... 32 0.30
AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein. 32 0.30
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 32 0.39
U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated p... 30 1.2
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 30 1.2
AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical... 30 1.2
AL021481-1|CAA16333.1| 363|Caenorhabditis elegans Hypothetical ... 30 1.6
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 29 2.1
U21321-1|AAG00051.1| 507|Caenorhabditis elegans Fizzy (cdc20 pr... 29 2.8
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81531-5|CAB04319.1| 1152|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z81549-7|CAB04471.1| 327|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical p... 27 8.4
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 27 8.4
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 27 8.4
>AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical
protein Y79H2A.6 protein.
Length = 368
Score = 155 bits (377), Expect = 2e-38
Identities = 68/127 (53%), Positives = 90/127 (70%), Gaps = 1/127 (0%)
Frame = +2
Query: 245 IXTNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDD 424
+ ++N++HI++ DW+ + L EHDL V G+DW TNRIV+CS D+NA+VWT D
Sbjct: 31 VSASSNDIHIFEWRNGDWQSIHTLSEHDLPVTGLDWGTKTNRIVSCSQDKNAFVWT-FDK 89
Query: 425 GKWATTLVLLRINRAATCVKWSPMENKF-LSVRS*IDIICYFEXGNNWWVSKHIKKPIRS 601
W LVL+R NRAAT VKWSP+ENKF + + + +CY+E N+WWVSK IKKPIRS
Sbjct: 90 NVWKPELVLVRFNRAATYVKWSPLENKFAVGSGAKLVSVCYYEKENDWWVSKQIKKPIRS 149
Query: 602 TVTSIDW 622
TVT +DW
Sbjct: 150 TVTCLDW 156
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 201 PITCHAWNKDRSQIAXS 251
PITCHAWNKDR+QIA S
Sbjct: 16 PITCHAWNKDRTQIAVS 32
>AL034393-7|CAA22322.2| 337|Caenorhabditis elegans Hypothetical
protein Y18D10A.9 protein.
Length = 337
Score = 48.4 bits (110), Expect = 4e-06
Identities = 29/117 (24%), Positives = 53/117 (45%)
Frame = +2
Query: 266 VHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTL 445
V +Y++E ++ + N L H+ V ++ + + TCS D++ + W Q +D ++ +
Sbjct: 91 VVVYQQEDGEFAEVNKLEGHESEVKCAVFSKSDEFLATCSRDKSVWFWQQDEDEDFSVSS 150
Query: 446 VLLRINRAATCVKWSPMENKFLSVRS*IDIICYFEXGNNWWVSKHIKKPIRSTVTSI 616
+L + V W P E+ +S I Y G +W + I TV SI
Sbjct: 151 ILQPHTQDVKQVAWHPTEDLLVSCSYDSSIRFYRFDGEDWVTQQKIDGCHVGTVWSI 207
>AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform b protein.
Length = 211
Score = 41.5 bits (93), Expect = 5e-04
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Frame = +2
Query: 314 LVEHDLRVMGIDWA-PNTNRIV-TCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKW 487
LV H V + WA P ++ + S D+ +W + G+W + TCV +
Sbjct: 54 LVGHSGPVWKVSWAHPKYGGLLASASYDKKVIIWNE-QQGRWQKAYEWAAHEASTTCVAF 112
Query: 488 SPMENKFL--SVRS*IDI-ICYFEXGNNWWVSKHIKKPIRSTVTSIDWLP 628
+P + + S + DI I ++ +N W+S I+K V S+ W P
Sbjct: 113 APHQYGLMLASASADGDIGILRYDNSSNEWISSKIQKCHEQGVNSVCWAP 162
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 6/57 (10%)
Frame = +2
Query: 275 YKKEGNDWKQTNNLVEHDLRVMGIDWAPNT------NRIVTCSVDRNAYVWTQGDDG 427
Y N+W + H+ V + WAP + R+V+ D+N +W G
Sbjct: 135 YDNSSNEWISSKIQKCHEQGVNSVCWAPGSADPAAKKRLVSAGNDKNVKIWALSQFG 191
>AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform a protein.
Length = 313
Score = 41.5 bits (93), Expect = 5e-04
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Frame = +2
Query: 314 LVEHDLRVMGIDWA-PNTNRIV-TCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKW 487
LV H V + WA P ++ + S D+ +W + G+W + TCV +
Sbjct: 54 LVGHSGPVWKVSWAHPKYGGLLASASYDKKVIIWNE-QQGRWQKAYEWAAHEASTTCVAF 112
Query: 488 SPMENKFL--SVRS*IDI-ICYFEXGNNWWVSKHIKKPIRSTVTSIDWLP 628
+P + + S + DI I ++ +N W+S I+K V S+ W P
Sbjct: 113 APHQYGLMLASASADGDIGILRYDNSSNEWISSKIQKCHEQGVNSVCWAP 162
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Frame = +2
Query: 275 YKKEGNDWKQTNNLVEHDLRVMGIDWAPNT------NRIVTCSVDRNAYVWTQGD-DGKW 433
Y N+W + H+ V + WAP + R+V+ D+N +W D +W
Sbjct: 135 YDNSSNEWISSKIQKCHEQGVNSVCWAPGSADPAAKKRLVSAGNDKNVKIWAFDDATNEW 194
Query: 434 ATTLVLLRINRAATCVKWSPMEN 502
L W P+ N
Sbjct: 195 ILEKTLAGHTDFVREAAWCPVTN 217
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 37.1 bits (82), Expect = 0.010
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +2
Query: 290 NDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQ 415
++W + + ++ H L V I W P+ R++T S DR A ++T+
Sbjct: 596 SNWSKKSEIIGHQLTVTQIAWNPSGTRLLTVSRDRTAKLYTE 637
>AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily
assigned gene nameprotein 305 protein.
Length = 869
Score = 37.1 bits (82), Expect = 0.010
Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 1/119 (0%)
Frame = +2
Query: 275 YKKEGNDWKQTN-NLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVL 451
+K +D + N NL H + + W + +++ +C YVW + DD +W+ LV
Sbjct: 51 FKPTPDDLTRYNFNLRGHHNAIRMVTWNKSQSKLASCDASGIIYVWVRNDD-RWSVELVN 109
Query: 452 LRINRAATCVKWSPMENKFLSVRS*IDIICYFEXGNNWWVSKHIKKPIRSTVTSIDWLP 628
R + + + WSP L ++ G W + P+ + VT W P
Sbjct: 110 DRGVKVSD-LSWSPCGGSALICYDDNFVLIGSANGQRVWSNSF---PLPAAVTCGVWAP 164
>Z35663-5|CAA84727.1| 681|Caenorhabditis elegans Hypothetical
protein T04A8.7a protein.
Length = 681
Score = 34.3 bits (75), Expect = 0.074
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 290 NDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC----SVDRNAYVWTQGDDGKWATTL 445
+ +KQ V+ D V G++WAP ++ + D+NA V+ + + GKW+ T+
Sbjct: 51 SSYKQFGLNVQPDNSVKGLEWAPAAEKLALIGDFNNWDQNANVYKKEEHGKWSITV 106
>U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical
protein K10D2.1b protein.
Length = 669
Score = 33.9 bits (74), Expect = 0.097
Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 5/116 (4%)
Frame = +2
Query: 296 WKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAAT 475
+K+ L H + V+ ++W+PN + + S+D ++ T VL I
Sbjct: 123 YKECCVLRGHSMEVLTVEWSPNGKYLASGSIDYRIIIYNARKLPDRIT--VLNDIQLPVK 180
Query: 476 CVKWSPMENKFLSVRS*IDIICYFEXGNNWWVSKHIKKPIRSTV-----TSIDWLP 628
+ W P+ S+ D F ++W K + +P S + T +DW P
Sbjct: 181 GLSWDPIGKYLASLEG--DKKLRFWATDSWQCVKSVTEPFESNIEETMLTRLDWSP 234
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 33.9 bits (74), Expect = 0.097
Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 5/116 (4%)
Frame = +2
Query: 296 WKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAAT 475
+K+ L H + V+ ++W+PN + + S+D ++ T VL I
Sbjct: 411 YKECCVLRGHSMEVLTVEWSPNGKYLASGSIDYRIIIYNARKLPDRIT--VLNDIQLPVK 468
Query: 476 CVKWSPMENKFLSVRS*IDIICYFEXGNNWWVSKHIKKPIRSTV-----TSIDWLP 628
+ W P+ S+ D F ++W K + +P S + T +DW P
Sbjct: 469 GLSWDPIGKYLASLEG--DKKLRFWATDSWQCVKSVTEPFESNIEETMLTRLDWSP 522
>Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical
protein K08F9.2 protein.
Length = 600
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/60 (21%), Positives = 27/60 (45%)
Frame = +2
Query: 308 NNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKW 487
N+ H +V+ + W+P+ R+ T S+D + +W G+ + + V+W
Sbjct: 519 NSWTFHTSKVLTVAWSPDNQRLATGSIDTSVIIWDMKKPGEHPVIIKGAHPMSSVNVVRW 578
Score = 31.1 bits (67), Expect = 0.69
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 317 VEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 409
V H + + W+P+ +RI T S D++ +W
Sbjct: 234 VAHTGSIFALAWSPDQSRIATASADKSVKIW 264
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 32.3 bits (70), Expect = 0.30
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 296 WKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGD 421
W+ L HD R++ +D +P+ + + + DR +W Q D
Sbjct: 454 WQPLRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLWAQSD 495
>U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated
protein 78, isoform a protein.
Length = 611
Score = 32.3 bits (70), Expect = 0.30
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 305 TNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 409
TN+ H +V + W+P+ R+ T S+D + VW
Sbjct: 529 TNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVW 563
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 317 VEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 409
V H V G+ W+P+ +I + S D+ +W
Sbjct: 236 VAHSGSVFGLTWSPDGTKIASASADKTIKIW 266
>AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein.
Length = 611
Score = 32.3 bits (70), Expect = 0.30
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 305 TNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 409
TN+ H +V + W+P+ R+ T S+D + VW
Sbjct: 529 TNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVW 563
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 317 VEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 409
V H V G+ W+P+ +I + S D+ +W
Sbjct: 236 VAHSGSVFGLTWSPDGTKIASASADKTIKIW 266
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 31.9 bits (69), Expect = 0.39
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 296 WKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWT 412
W + +L +H V G+ + N +VTCS+D++ V++
Sbjct: 453 WSEVVSLSDHSGPVTGVRFGENARSLVTCSLDKSLRVFS 491
>U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated
protein 78, isoform b protein.
Length = 517
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 317 VEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 409
V H V G+ W+P+ +I + S D+ +W
Sbjct: 236 VAHSGSVFGLTWSPDGTKIASASADKTIKIW 266
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +2
Query: 257 NNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 409
NN +Y N K +L H L V +D AP++ VT SVD++ VW
Sbjct: 565 NNTCSVYFV--NTLKFFVSLYGHSLPVTCVDIAPSSKLCVTGSVDKSVKVW 613
>AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical
protein Y110A7A.8 protein.
Length = 504
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -3
Query: 421 ISLSPDVSITV-NRTRNNTVGVGS-PINPHHSKVVFHKVVCLLP 296
++ P ++ V +T+ N +G + NPHH + FH++V +P
Sbjct: 250 LATMPSCNVQVLGKTKKNLIGFSTVSTNPHHGFIYFHQLVQKMP 293
>AL021481-1|CAA16333.1| 363|Caenorhabditis elegans Hypothetical
protein Y43F4B.4 protein.
Length = 363
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 278 KKEGNDWKQTNNLVEHDLRVMGIDWA-PNTNRIV-TCSVDRNAYVWTQ 415
K +GN W+++ + H V + WA P +IV TCS DR +W +
Sbjct: 47 KPDGN-WRRSAHWKCHGGAVWRVIWAHPEFGQIVATCSYDRTIVIWEE 93
Score = 29.5 bits (63), Expect = 2.1
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +2
Query: 344 IDWAPNTNRIVTCSVDRNAYVWTQGDDGKW 433
+ + P+ R+ TC+ D +W + DG W
Sbjct: 23 VSFDPHGRRMATCASDMTMAIWDRKPDGNW 52
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +2
Query: 341 GIDWAP-NTNRIVTCSVDRNAYVWTQGDDGKWAT-TLVLLRINRAATCVKWSPMENKFLS 514
G+ W+ T + T + + Y+W + G+WA L ++ + WSP E L+
Sbjct: 233 GLAWSSLKTGDLATGDIIKKIYLWQMKEGGQWAVGANPLTGHKKSVEDLAWSPTETGLLA 292
>U21321-1|AAG00051.1| 507|Caenorhabditis elegans Fizzy (cdc20
protein family) homologprotein 1 protein.
Length = 507
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 257 NNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 409
N++V I + + W N H V ++W+ + N V+ S DR A +W
Sbjct: 295 NHDVRISQHVVSSWGGDNG---HCRDVTALEWSADENMCVSGSSDRTAKIW 342
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical
protein R06A4.9 protein.
Length = 809
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +2
Query: 326 DLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSP 493
D + G+ +AP + T S D A VW D ++ VL C+ W P
Sbjct: 217 DEAIRGLAFAPTDVKFATASDDGTARVW---DFARYTEERVLRGHGAEVRCIDWHP 269
>Z81531-5|CAB04319.1| 1152|Caenorhabditis elegans Hypothetical protein
F36D3.5 protein.
Length = 1152
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 269 HIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDD 424
HI+ E D K TN+ +E + + APNT ++ D N + T D
Sbjct: 931 HIWMDERTDNKITNDFMEKFQAITSDEAAPNTTHVIV-KTDENGVLETDDLD 981
>Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical
protein F53C11.7 protein.
Length = 478
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +2
Query: 314 LVEHDLRVMGIDWAPNT-NRIVTCSVDRNAYVWTQGDDGKWATTLVL-LRINRAATCVKW 487
L H+ + G+ WAP++ + I T D A +W + K +L R + W
Sbjct: 398 LRNHEATINGLSWAPHSGSHICTAGDDYQALIWDVHEMPKPINDPILAYRAQAEVNQIHW 457
Query: 488 SPMENKFLSVRS 523
S ++S+ S
Sbjct: 458 SSSFPDWISICS 469
>Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical
protein R01H10.3d protein.
Length = 495
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 5/68 (7%)
Frame = +2
Query: 323 HDLRVMGIDWAP-NTNRIVTCSVDRNAYVWTQGDDG----KWATTLVLLRINRAATCVKW 487
H + + W+P N N I +CS D VW D G + L + + W
Sbjct: 78 HKAPCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAW 137
Query: 488 SPMENKFL 511
P+ N L
Sbjct: 138 HPVANNVL 145
>Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical
protein R01H10.3c protein.
Length = 607
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 5/68 (7%)
Frame = +2
Query: 323 HDLRVMGIDWAP-NTNRIVTCSVDRNAYVWTQGDDG----KWATTLVLLRINRAATCVKW 487
H + + W+P N N I +CS D VW D G + L + + W
Sbjct: 78 HKAPCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAW 137
Query: 488 SPMENKFL 511
P+ N L
Sbjct: 138 HPVANNVL 145
>Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical
protein R01H10.3b protein.
Length = 538
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 5/68 (7%)
Frame = +2
Query: 323 HDLRVMGIDWAP-NTNRIVTCSVDRNAYVWTQGDDG----KWATTLVLLRINRAATCVKW 487
H + + W+P N N I +CS D VW D G + L + + W
Sbjct: 78 HKAPCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAW 137
Query: 488 SPMENKFL 511
P+ N L
Sbjct: 138 HPVANNVL 145
>Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical
protein R01H10.3a protein.
Length = 605
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 5/68 (7%)
Frame = +2
Query: 323 HDLRVMGIDWAP-NTNRIVTCSVDRNAYVWTQGDDG----KWATTLVLLRINRAATCVKW 487
H + + W+P N N I +CS D VW D G + L + + W
Sbjct: 78 HKAPCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAW 137
Query: 488 SPMENKFL 511
P+ N L
Sbjct: 138 HPVANNVL 145
>Z81549-7|CAB04471.1| 327|Caenorhabditis elegans Hypothetical
protein F55C9.8 protein.
Length = 327
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 449 LLRINRAATCVKWSPMENKFLSVRS*IDIICY 544
++RIN +KW+P+E + +R+ IDII Y
Sbjct: 60 MVRINVGCKLIKWNPLE---VDLRTLIDIIQY 88
>Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical
protein F26D2.10 protein.
Length = 1213
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 269 HIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDD 424
HI+ E D K TN+ +E + + APNT ++ D N + T D
Sbjct: 992 HIWMDEITDNKITNDFMEKFQAITSDEAAPNTTHVIV-KTDENGVLDTDNLD 1042
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +2
Query: 233 KSNCIXTNNNEVHIYKKEG-NDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 409
K N + H+ + G K + H + + ++ N I++CS D + VW
Sbjct: 317 KDNSHILSGGNDHVVRVHGMKSGKCLKEMRGHSSYITDVRYSDEGNHIISCSTDGSIRVW 376
Query: 410 TQGDDGKWATT 442
G G+ +T
Sbjct: 377 -HGKSGECLST 386
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +2
Query: 233 KSNCIXTNNNEVHIYKKEG-NDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 409
K N + H+ + G K + H + + ++ N I++CS D + VW
Sbjct: 317 KDNSHILSGGNDHVVRVHGMKSGKCLKEMRGHSSYITDVRYSDEGNHIISCSTDGSIRVW 376
Query: 410 TQGDDGKWATT 442
G G+ +T
Sbjct: 377 -HGKSGECLST 386
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,833,360
Number of Sequences: 27780
Number of extensions: 318876
Number of successful extensions: 830
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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