Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0920
         (637 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0191 - 17720512-17721435,17721718-17721843,17721940-177221...    29   4.1  
03_02_0839 - 11653332-11653373,11653515-11653586,11653678-11654223     28   5.4  
01_06_1548 + 38157796-38157955,38158771-38159252                       28   5.4  
09_02_0437 - 9399982-9401253                                           28   7.1  
04_01_0613 - 8042568-8042686,8043107-8043206,8043550-8043594,804...    28   7.1  
01_01_0758 + 5843702-5843874,5844021-5844083,5844174-5844290,584...    28   7.1  
02_05_0579 + 30114127-30114177,30114691-30115386,30115883-301160...    27   9.4  

>06_03_0191 - 17720512-17721435,17721718-17721843,17721940-17722140,
            17722189-17722332,17722415-17722722,17723433-17723568,
            17723748-17723841,17723976-17724073,17724951-17725004,
            17725704-17726150,17726227-17726393,17726540-17726663,
            17726751-17726837,17727000-17727056,17727492-17727560,
            17727664-17727811,17727893-17728116,17728842-17728958,
            17729649-17729742,17730573-17730640,17733278-17733334,
            17733412-17733511,17733638-17733674,17734077-17734200,
            17735254-17735322,17735371-17735410,17735905-17735993,
            17736849-17736953,17737033-17737104,17737814-17737936,
            17738049-17738117,17738966-17739059,17739145-17739231,
            17740184-17740351,17740436-17740552,17741484-17741590,
            17741671-17741803,17742564-17742667,17743504-17743629,
            17744148-17744216,17744996-17745064,17745278-17745358,
            17745444-17745533,17745896-17746000,17747803-17747873,
            17748320-17748461,17749266-17749330,17750081-17750168,
            17750236-17750325,17750437-17750673,17751064-17751170,
            17751625-17751832,17752376-17752546
          Length = 2366

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/51 (25%), Positives = 28/51 (54%)
 Frame = -1

Query: 349  DESKVIGEVLSDNVLSVADPQLVAVLHGVPTSSMIRLLTTFWMMEPLPWFS 197
            D + +I + + +N+ S+ D +  + +  +  S++IRLL T   + P  W +
Sbjct: 1137 DPAAMINQNIEENLFSMLDEETDSEIAALVRSTIIRLLYTSCPLRPSRWLA 1187


>03_02_0839 - 11653332-11653373,11653515-11653586,11653678-11654223
          Length = 219

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 17/50 (34%), Positives = 20/50 (40%)
 Frame = -3

Query: 191 QALTDSAVVVTGEDAVVQFLLEFFVRTAHASRGHFSDAGADGEHARREHH 42
           Q  T +  +     A  Q  LE F+  A A  G     GADG    R HH
Sbjct: 64  QGATGNGFLRPAGAAAGQMTLEDFLSRAGADSGSGGGGGADGARWARAHH 113


>01_06_1548 + 38157796-38157955,38158771-38159252
          Length = 213

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
 Frame = -1

Query: 286 LVAVLHGVPTSSMIRLL------TTFWMMEPLPWFSY 194
           LVAV HG  TSS  RL+      + F +  P PW+++
Sbjct: 62  LVAVGHGADTSSTSRLIVDVDFRSQFQLARPAPWYAH 98


>09_02_0437 - 9399982-9401253
          Length = 423

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = -3

Query: 218 GALALVLVFQALTDSAVVVTGEDAVVQFLLEFFVRTAHASRG 93
           G +  VL+ +A    AVV  GED V ++ +E  VR + A+RG
Sbjct: 300 GGILTVLIKRARRP-AVVAGGEDDVEEWAVEKSVRLSEATRG 340


>04_01_0613 -
           8042568-8042686,8043107-8043206,8043550-8043594,
           8043691-8043770,8045082-8046322,8047077-8047507
          Length = 671

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 20/72 (27%), Positives = 31/72 (43%)
 Frame = +3

Query: 108 SSSNKELEEKLYNSILTGDYDSAVRQSLEYENQGKGSIIQNVVNNLIIDEVGTPWSTATS 287
           S ++ E+ EKLYN +   +   +      Y   GK  I  ++ N +   +V   WS A  
Sbjct: 217 SCADMEMAEKLYNRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDV-VSWS-AMI 274

Query: 288 CGSATDSTLSES 323
            G A  S   E+
Sbjct: 275 AGYAESSKPMEA 286


>01_01_0758 +
           5843702-5843874,5844021-5844083,5844174-5844290,
           5847180-5847945
          Length = 372

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 392 LALKLGPTLDPANERLAYGDGKEKNS 469
           +AL  GP L P N   A+G G E  S
Sbjct: 146 IALYSGPALSPLNHHRAFGGGAESGS 171


>02_05_0579 +
           30114127-30114177,30114691-30115386,30115883-30116083,
           30116354-30116658,30116944-30117073
          Length = 460

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -3

Query: 188 ALTDSAVVVTGEDAVVQFLLEFFVRTAHASRGHFSDAG 75
           A  DS+  + G  A+    L F   T  +S G+F D G
Sbjct: 340 ARADSSHCIPGRQAISNISLSFSGLTGESSAGYFQDCG 377


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,906,318
Number of Sequences: 37544
Number of extensions: 315441
Number of successful extensions: 1037
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)