Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0920
         (637 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_34457| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.8  
SB_31658| Best HMM Match : Arm (HMM E-Value=0.91)                      29   2.4  
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.2  
SB_51910| Best HMM Match : ig (HMM E-Value=4.9e-05)                    28   5.5  
SB_36953| Best HMM Match : DUF572 (HMM E-Value=7.3)                    28   5.5  
SB_36876| Best HMM Match : ig (HMM E-Value=2.9e-26)                    28   5.5  
SB_20049| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-05)                 28   5.5  
SB_59616| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.3  
SB_14042| Best HMM Match : WD40 (HMM E-Value=2.1)                      28   7.3  

>SB_34457| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 339

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 599 ITRS*VXQSVVELSFKYWLYLVLWILKYTLCSP 501
           +  S +   V    F+ WL L+LW++   +CSP
Sbjct: 135 VVSSPILARVRRFRFRKWLPLLLWLISLIICSP 167


>SB_31658| Best HMM Match : Arm (HMM E-Value=0.91)
          Length = 249

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +2

Query: 392 LALKLGPTLDPANERLAYGD 451
           +++KL P +DP   RLAYGD
Sbjct: 6   ISVKLPPDIDPTKARLAYGD 25


>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 7645

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 21/68 (30%), Positives = 33/68 (48%)
 Frame = +3

Query: 138  LYNSILTGDYDSAVRQSLEYENQGKGSIIQNVVNNLIIDEVGTPWSTATSCGSATDSTLS 317
            +YN   T + D     SL+Y +  KG   + V  ++I D+V  P    T   ++TD T++
Sbjct: 1222 IYNGTATPNEDYTAPASLDY-SFAKGETEKIVRISIINDQVPEPTEKITLLLTSTDPTVT 1280

Query: 318  ESTSPITL 341
              T   TL
Sbjct: 1281 LDTPVSTL 1288


>SB_51910| Best HMM Match : ig (HMM E-Value=4.9e-05)
          Length = 562

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = -2

Query: 624 GVGGVGAEYNTVLSVAVSRR 565
           GVGGVG E NT  +VA S R
Sbjct: 313 GVGGVGVEENTTANVAKSMR 332


>SB_36953| Best HMM Match : DUF572 (HMM E-Value=7.3)
          Length = 393

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 21/74 (28%), Positives = 34/74 (45%)
 Frame = +3

Query: 111 SSNKELEEKLYNSILTGDYDSAVRQSLEYENQGKGSIIQNVVNNLIIDEVGTPWSTATSC 290
           S++KE + K    +L+GD +   ++ L       GS+   +  +  I   G+   TA S 
Sbjct: 139 STDKEKKPKKVR-LLSGDKEKKSKKKLSLNASQHGSLHSMLAGSSSISATGSASVTAMSN 197

Query: 291 GSATDSTLSESTSP 332
           G AT    S + SP
Sbjct: 198 GVATPIGTSTAGSP 211


>SB_36876| Best HMM Match : ig (HMM E-Value=2.9e-26)
          Length = 1128

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -3

Query: 314 QCAVRCRPTACSSTPW--CSDFVNDQVVNYILDD 219
           QC +R RP A +S  W   S F N   ++ +LDD
Sbjct: 893 QCTMRARPLAGASRDWVTSSGFSNPASLSCVLDD 926


>SB_20049| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-05)
          Length = 1023

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 239 QPDH*RSRNTMEYCYKLWVGNG 304
           +P H  S +T++Y Y+LW G G
Sbjct: 753 RPRHPSSTSTVKYRYRLWTGKG 774


>SB_59616| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2735

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +3

Query: 285 SCGSATDSTLSESTSPITLDSSWP 356
           S GS TDS  S STSP+ L  + P
Sbjct: 619 SAGSGTDSASSRSTSPLNLPYTSP 642


>SB_14042| Best HMM Match : WD40 (HMM E-Value=2.1)
          Length = 236

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +3

Query: 285 SCGSATDSTLSESTSPITLDSSWP 356
           S GS TDS  S STSP+ L  + P
Sbjct: 64  SAGSGTDSASSRSTSPLNLPYTSP 87


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,245,443
Number of Sequences: 59808
Number of extensions: 367166
Number of successful extensions: 1214
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)