Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0920
         (637 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g59210.2 68418.m07421 myosin heavy chain-related contains wea...    34   0.091
At5g59210.1 68418.m07420 myosin heavy chain-related contains wea...    34   0.091
At2g18700.1 68415.m02178 glycosyl transferase family 20 protein ...    31   0.48 
At4g13310.2 68417.m02080 cytochrome P450 71A20, putative (CYP71A...    29   3.4  
At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A...    29   3.4  
At3g47620.1 68416.m05184 TCP family transcription factor, putati...    28   4.5  
At2g25730.1 68415.m03084 expressed protein                             28   6.0  
At2g15490.1 68415.m01772 UDP-glucoronosyl/UDP-glucosyl transfera...    28   6.0  
At4g35380.1 68417.m05026 guanine nucleotide exchange family prot...    27   7.9  

>At5g59210.2 68418.m07421 myosin heavy chain-related contains weak
           similarity to Myosin heavy chain, gizzard smooth muscle
           (Swiss-Prot:P10587) [Gallus gallus]
          Length = 433

 Score = 33.9 bits (74), Expect = 0.091
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
 Frame = +3

Query: 105 MSSSNKELE-EKLY--NSILTGDYDSAVRQSLEYENQGKGSIIQNVVNNLIIDEVGTPWS 275
           M   N+  E EKL+  NS L+  Y  ++  S ++ENQ K  + QNV    ++D++ T  +
Sbjct: 288 MEIDNQSSEIEKLFEENSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLRTEQA 347

Query: 276 TATSCG-SATDSTLSESTSPITL 341
            + S G S  ++  S  T  ++L
Sbjct: 348 GSFSRGPSEFEANGSHGTDTLSL 370


>At5g59210.1 68418.m07420 myosin heavy chain-related contains weak
           similarity to Myosin heavy chain, gizzard smooth muscle
           (Swiss-Prot:P10587) [Gallus gallus]
          Length = 434

 Score = 33.9 bits (74), Expect = 0.091
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
 Frame = +3

Query: 105 MSSSNKELE-EKLY--NSILTGDYDSAVRQSLEYENQGKGSIIQNVVNNLIIDEVGTPWS 275
           M   N+  E EKL+  NS L+  Y  ++  S ++ENQ K  + QNV    ++D++ T  +
Sbjct: 289 MEIDNQSSEIEKLFEENSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLRTEQA 348

Query: 276 TATSCG-SATDSTLSESTSPITL 341
            + S G S  ++  S  T  ++L
Sbjct: 349 GSFSRGPSEFEANGSHGTDTLSL 371


>At2g18700.1 68415.m02178 glycosyl transferase family 20 protein /
           trehalose-phosphatase family protein similar to
           trehalose-6-phosphate synthase SL-TPS/P [Selaginella
           lepidophylla] GI:4100325; contains Pfam profiles
           PF00982: Glycosyltransferase family 20, PF02358:
           Trehalose-phosphatase
          Length = 862

 Score = 31.5 bits (68), Expect = 0.48
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = -3

Query: 281 SSTPWCSDFVNDQVVNYILDDGALALVLVFQALTDSAVVVTGEDAVVQFLLEFF 120
           SS  WC +F ND +   + D       +V+    ++ V+ + ++ V QFLLE F
Sbjct: 68  SSNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVLPSEQEDVSQFLLEKF 121


>At4g13310.2 68417.m02080 cytochrome P450 71A20, putative (CYP71A20)
           Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
           thaliana]; similar to cytochrome P450 71A4, Solanum
           melongena, PIR2:S36805
          Length = 390

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 135 KLYNSILTGDYDSAVRQSLEYENQGKGSIIQNVVNNLII 251
           K+ + IL+G  D A     EY  Q K   IQN++NN ++
Sbjct: 103 KVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMV 141


>At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A20)
           Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
           thaliana]; similar to cytochrome P450 71A4, Solanum
           melongena, PIR2:S36805
          Length = 497

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 135 KLYNSILTGDYDSAVRQSLEYENQGKGSIIQNVVNNLII 251
           K+ + IL+G  D A     EY  Q K   IQN++NN ++
Sbjct: 103 KVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMV 141


>At3g47620.1 68416.m05184 TCP family transcription factor, putative
           auxin-induced basic helix-loop-helix transcription
           factor - Gossypium hirsutum, EMBL:AF165924
          Length = 489

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = -3

Query: 218 GALALVLVFQALTDSAVVVTGEDAVVQFLLEFFVRTAHASRGHFSDAGADGEHARREHHE 39
           GA++  L F         +TG+  +           ++ + G  SD G D  + +R HH 
Sbjct: 391 GAVSSGLHFMNFAAPMAFLTGQQQLATTSNHEINEDSNNNEGGRSDGGGDHHNTQRHHHH 450

Query: 38  -KFHYHSCL 15
            + H+H+ L
Sbjct: 451 QQQHHHNIL 459


>At2g25730.1 68415.m03084 expressed protein 
          Length = 2464

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 19/68 (27%), Positives = 33/68 (48%)
 Frame = -3

Query: 329  GSTF*QCAVRCRPTACSSTPWCSDFVNDQVVNYILDDGALALVLVFQALTDSAVVVTGED 150
            G +F     R  PT   S  W ++   ++ VN ++D+G L   L   AL+D  +     D
Sbjct: 1282 GGSFENGVCRTDPTVFLSFDWENEVPYEKAVNRLIDEGKLMDAL---ALSDRFLRNGASD 1338

Query: 149  AVVQFLLE 126
             ++Q L++
Sbjct: 1339 WLLQLLIK 1346


>At2g15490.1 68415.m01772 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 484

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 19/71 (26%), Positives = 34/71 (47%)
 Frame = +3

Query: 144 NSILTGDYDSAVRQSLEYENQGKGSIIQNVVNNLIIDEVGTPWSTATSCGSATDSTLSES 323
           N + TG+ +  + +  E  N+GKG II+     ++I +        T CG   +STL   
Sbjct: 326 NQVGTGENEDWLPKGFEERNKGKGLIIRGWAPQVLILDHKAIGGFVTHCG--WNSTLEGI 383

Query: 324 TSPITLDSSWP 356
            + + +  +WP
Sbjct: 384 AAGLPM-VTWP 393


>At4g35380.1 68417.m05026 guanine nucleotide exchange family protein
           similar to guanine nucleotide exchange factor [Homo
           sapiens] GI:5456754; contains Pfam profile PF01369: Sec7
           domain
          Length = 1706

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +3

Query: 216 SIIQNVVNNLIIDEVGTPWSTATSCGSATDST 311
           +I++ +VN L+   +G P  ++T+   A DST
Sbjct: 450 NILERIVNGLLKTALGPPTGSSTTLSPAQDST 481


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,496,606
Number of Sequences: 28952
Number of extensions: 240625
Number of successful extensions: 679
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)