Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0918
         (642 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58747-1|AAL27234.3|  594|Caenorhabditis elegans Hypothetical pr...   107   9e-24
U58747-2|AAQ91905.1|  393|Caenorhabditis elegans Hypothetical pr...    39   0.003
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr...    29   3.7  
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro...    29   3.7  
Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical p...    28   4.9  
Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical p...    28   4.9  
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    28   4.9  
AF047655-5|AAC04399.1|  820|Caenorhabditis elegans Hypothetical ...    28   4.9  
L16559-10|AAA27927.1|  371|Caenorhabditis elegans Hypothetical p...    28   6.5  

>U58747-1|AAL27234.3|  594|Caenorhabditis elegans Hypothetical
           protein C55F2.1b protein.
          Length = 594

 Score =  107 bits (256), Expect = 9e-24
 Identities = 47/80 (58%), Positives = 63/80 (78%)
 Frame = +3

Query: 15  ATALRNAGLTVQDVSDITRAPEMLGGRVKTLHPAVHAGILARLSDSDQEDMKRQKYEMIS 194
           A A+R+ G+ V DV+D+T+ PEMLGGRVKTLHPAVH GILAR ++SD++D+++     +S
Sbjct: 39  AKAIRDQGIDVHDVADVTKFPEMLGGRVKTLHPAVHGGILARDTESDRKDLEKHNISFVS 98

Query: 195 VVVCNLYPFVQTVSKPDVTV 254
           VVVCNLYPF +TV   D +V
Sbjct: 99  VVVCNLYPFKKTVQSKDCSV 118



 Score = 68.9 bits (161), Expect = 3e-12
 Identities = 31/62 (50%), Positives = 44/62 (70%)
 Frame = +1

Query: 310 KNHDRVTVVCXPADYDAVVKEIKENKHHQTTLGTRQRLALKAFTHTSDYDLAISDYFRKQ 489
           KNH+RV+V+C PADYD ++ E+K      TT   RQ LALKAF HT+ YD +IS + R++
Sbjct: 138 KNHERVSVICDPADYDHIISELKSG---GTTRERRQLLALKAFEHTTSYDESISGFMRRR 194

Query: 490 YS 495
           ++
Sbjct: 195 FA 196



 Score = 39.1 bits (87), Expect = 0.003
 Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = +3

Query: 510 LTLRYGMNPHQK-PAQVFTTRDSLPITTLNGA 602
           L LRYG NPHQK  A+++   D +PI  LNG+
Sbjct: 203 LPLRYGTNPHQKDDAELYIVEDEMPIKVLNGS 234



 Score = 33.5 bits (73), Expect = 0.13
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = +2

Query: 257 DAVENIDIGGVTLLRA 304
           +AVENIDIGGVTLLRA
Sbjct: 120 EAVENIDIGGVTLLRA 135


>U58747-2|AAQ91905.1|  393|Caenorhabditis elegans Hypothetical
           protein C55F2.1c protein.
          Length = 393

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = +3

Query: 510 LTLRYGMNPHQK-PAQVFTTRDSLPITTLNGA 602
           L LRYG NPHQK  A+++   D +PI  LNG+
Sbjct: 73  LPLRYGTNPHQKDDAELYIVEDEMPIKVLNGS 104



 Score = 28.7 bits (61), Expect = 3.7
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +1

Query: 430 KAFTHTSDYDLAISDYFRKQYS 495
           KAF HT+ YD +IS + R++++
Sbjct: 45  KAFEHTTSYDESISGFMRRRFA 66


>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical protein
            C25D7.3 protein.
          Length = 2150

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/64 (25%), Positives = 32/64 (50%)
 Frame = +3

Query: 60   DITRAPEMLGGRVKTLHPAVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSK 239
            ++  +P+ +         AV   I   +SD++  D+ R+K E  S++  N+    Q +++
Sbjct: 972  ELVDSPDQVENEEPERVEAVTENIRQEMSDAEMRDLMRKKREQYSMLFPNVPQPFQPLNR 1031

Query: 240  PDVT 251
             DVT
Sbjct: 1032 FDVT 1035


>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger protein
            protein.
          Length = 2150

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/64 (25%), Positives = 32/64 (50%)
 Frame = +3

Query: 60   DITRAPEMLGGRVKTLHPAVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSK 239
            ++  +P+ +         AV   I   +SD++  D+ R+K E  S++  N+    Q +++
Sbjct: 972  ELVDSPDQVENEEPERVEAVTENIRQEMSDAEMRDLMRKKREQYSMLFPNVPQPFQPLNR 1031

Query: 240  PDVT 251
             DVT
Sbjct: 1032 FDVT 1035


>Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical
            protein C47E12.5b protein.
          Length = 1028

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/25 (52%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = +3

Query: 99   KTLHPAVHAGIL-ARLSDSDQEDMK 170
            K+LHP+VHA +L   +SD D ED++
Sbjct: 996  KSLHPSVHALVLEPMMSDPDGEDVE 1020


>Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical
            protein C47E12.5a protein.
          Length = 1113

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/25 (52%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = +3

Query: 99   KTLHPAVHAGIL-ARLSDSDQEDMK 170
            K+LHP+VHA +L   +SD D ED++
Sbjct: 1081 KSLHPSVHALVLEPMMSDPDGEDVE 1105


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/31 (41%), Positives = 14/31 (45%)
 Frame = +2

Query: 2   EFGTSHGASERRPHSSRCVGHHESTGDARRS 94
           E GT HG      H+    GHHES G    S
Sbjct: 421 EHGTHHGHHGEHHHAPAHHGHHESHGHGHHS 451


>AF047655-5|AAC04399.1|  820|Caenorhabditis elegans Hypothetical
           protein C17B7.5 protein.
          Length = 820

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = -1

Query: 198 PRLSSRTSDVSCLPGQSRIIELRSQHVPLDVKFSPDLRASPVLS*CPTHLEL*GRRS 28
           P  S+ T+DVS +    R IE  +     D + + D+ ++P+L+    H++L GR S
Sbjct: 591 PETSTATTDVSQMTTTPRSIETTTPSTSNDTESNQDVISTPLLAWRQGHIDL-GRIS 646


>L16559-10|AAA27927.1|  371|Caenorhabditis elegans Hypothetical
           protein C06E1.11 protein.
          Length = 371

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 361 VVKEIKENKHHQTTLGTRQRLALKAFTHTS 450
           V KE+K++ HH TT  T + +A  A T+ S
Sbjct: 69  VGKEVKKDYHHGTTRNTIKTVATTATTYAS 98


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,467,887
Number of Sequences: 27780
Number of extensions: 257964
Number of successful extensions: 757
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)