Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0916
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41278-3|AAK31512.1|  453|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z75953-3|CAB00100.1|  611|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z50070-2|CAB54253.1| 1069|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z50070-1|CAA90399.1| 1105|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AL021447-3|CAA16274.1|  459|Caenorhabditis elegans Hypothetical ...    27   6.0  
AF166171-1|AAD49860.1|  611|Caenorhabditis elegans adducin-head-...    27   6.0  
AC006618-3|AAK68251.3|  960|Caenorhabditis elegans Patched relat...    27   8.0  

>U41278-3|AAK31512.1|  453|Caenorhabditis elegans Hypothetical
           protein F33G12.4 protein.
          Length = 453

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
 Frame = +2

Query: 131 NYASGVVFYLPSRVMALETTVTYPTSSD----SPYIFSGEACLDLVRRNRDTRPLLDTSS 298
           N A   + YLPSR+  L+   T   S++     PY+FS    ++ V  N + + +     
Sbjct: 253 NAAHNAIKYLPSRIGVLQNLNTIDVSNNLMTALPYVFSKIPSIEHVGINANDQMVRLEEE 312

Query: 299 TSPIIGIRKLL 331
             PI  IR+LL
Sbjct: 313 IGPIF-IRRLL 322


>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
           protein F07A11.4 protein.
          Length = 1095

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +2

Query: 116 TPEFGNYASGVVFYLPSRVMALETTVTYPTSSDSPYIFSGEA 241
           TP F  +      Y P+    L TT T  T+SD+P + S  A
Sbjct: 30  TPSFNTFKYSPSSYTPNISRNLNTTSTGSTTSDTPKLSSSSA 71


>Z75953-3|CAB00100.1|  611|Caenorhabditis elegans Hypothetical
           protein F57F5.4a protein.
          Length = 611

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 10/36 (27%), Positives = 22/36 (61%)
 Frame = +2

Query: 20  MRDEVSDNRFPRFTLDLHVNTKEKKYHLNAYNTPEF 127
           +RDE SD +  R++++   +T  +   +N++  P+F
Sbjct: 225 IRDEASDQKRARYSIESTSSTNNQLNEINSFVVPKF 260


>Z50070-2|CAB54253.1| 1069|Caenorhabditis elegans Hypothetical
           protein F43G6.1b protein.
          Length = 1069

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +2

Query: 8   IGFQMRDEVSDN-RFPRFTLDLHVNTK-EKKYHLNAYNTPEFGNYASGVVFYL 160
           IGF + DEVSD+ +  + + D  + ++ E  +HL+ Y +    +   G + YL
Sbjct: 555 IGFALIDEVSDDQQIVKISTDKTIKSRYEAPFHLDKYTSMSTHSTTLGNLVYL 607


>Z50070-1|CAA90399.1| 1105|Caenorhabditis elegans Hypothetical
           protein F43G6.1a protein.
          Length = 1105

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +2

Query: 8   IGFQMRDEVSDN-RFPRFTLDLHVNTK-EKKYHLNAYNTPEFGNYASGVVFYL 160
           IGF + DEVSD+ +  + + D  + ++ E  +HL+ Y +    +   G + YL
Sbjct: 591 IGFALIDEVSDDQQIVKISTDKTIKSRYEAPFHLDKYTSMSTHSTTLGNLVYL 643


>AL021447-3|CAA16274.1|  459|Caenorhabditis elegans Hypothetical
           protein F19B2.7 protein.
          Length = 459

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = -3

Query: 277 SCVPVSSYQVEAGLSAEYIRRVTAGWVRYSGL*SHNPGRKIENDSRSIVS 128
           SC  +S   ++  +   Y  R+T  WV Y  L     G++  ND +  V+
Sbjct: 286 SCYGLSEKTIDQEMKIAYPMRITCSWVNYKELKFEFAGKR--NDDKESVA 333


>AF166171-1|AAD49860.1|  611|Caenorhabditis elegans
           adducin-head-domain-related protein protein.
          Length = 611

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 10/36 (27%), Positives = 22/36 (61%)
 Frame = +2

Query: 20  MRDEVSDNRFPRFTLDLHVNTKEKKYHLNAYNTPEF 127
           +RDE SD +  R++++   +T  +   +N++  P+F
Sbjct: 225 IRDEASDQKRARYSIESTSSTNNQLNEINSFVVPKF 260


>AC006618-3|AAK68251.3|  960|Caenorhabditis elegans Patched related
           family protein 4 protein.
          Length = 960

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -2

Query: 422 YRFGSGTLKTAFDLMTTSLSSLGWKNPISAAIAS 321
           YR+     KTA + +  +L+S+GW  P++ A+ S
Sbjct: 860 YRYHRSEYKTAQEKVADTLASVGW--PVTQAVCS 891


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,867,094
Number of Sequences: 27780
Number of extensions: 249030
Number of successful extensions: 692
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)