Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0916
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   5.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   5.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   10.0 
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   10.0 
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   10.0 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   10.0 
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   10.0 

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 14/68 (20%), Positives = 32/68 (47%)
 Frame = +1

Query: 298 NISNNRNQEAIAAEIGFFHPRLDKEVVIKSNAVFKVPEPNRYILESSVSLCHSSLGADRV 477
           +I+ N ++   AA   F  P+ D       + + ++PE  +Y  E    +   + G +++
Sbjct: 503 HITINADKPMKAAIRIFIGPKYDSH-----HKLIEIPEDLKYFYEIDNWMLDLNSGLNKI 557

Query: 478 SKTVVRCF 501
           ++  + CF
Sbjct: 558 TRNSLDCF 565


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 14/68 (20%), Positives = 32/68 (47%)
 Frame = +1

Query: 298 NISNNRNQEAIAAEIGFFHPRLDKEVVIKSNAVFKVPEPNRYILESSVSLCHSSLGADRV 477
           +I+ N ++   AA   F  P+ D       + + ++PE  +Y  E    +   + G +++
Sbjct: 503 HITINADKPMKAAIRIFIGPKYDSH-----HKLIEIPEDLKYFYEIDNWMLDLNSGLNKI 557

Query: 478 SKTVVRCF 501
           ++  + CF
Sbjct: 558 TRNSLDCF 565


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 74  VNTKEKKYHLNAYNTPEF 127
           VNT     ++  YN PE+
Sbjct: 202 VNTNYSSKYMREYNDPEY 219


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 160 SVQGYGSRDHCN 195
           S+ GYGS D C+
Sbjct: 160 SLNGYGSSDGCD 171


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 167 WTEDRKRLPKHSFRT 123
           W E+RK+   H F T
Sbjct: 175 WNEERKQYYLHQFAT 189


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = +2

Query: 167 RVMALETTVTYPTSSDSPYIFSGEACLDLVRRNRDTR 277
           R+ ++  T++   S     +FS +  + L+R  R+ R
Sbjct: 878 RITSMSVTISLSASVTIACLFSPKLYIILIRPERNVR 914


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 290 YLTEVLCPCFFLPGRG 243
           Y +E+    FFL GRG
Sbjct: 90  YASEIAIGLFFLHGRG 105


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,494
Number of Sequences: 438
Number of extensions: 3679
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)