Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0915
(447 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 148 2e-36
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 148 2e-36
SB_56| Best HMM Match : Actin (HMM E-Value=0) 148 2e-36
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 148 2e-36
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 148 2e-36
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 3e-22
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 1e-13
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 1e-09
SB_54| Best HMM Match : Actin (HMM E-Value=0) 60 1e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 55 2e-08
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 4e-07
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 35 0.027
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.047
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 34 0.047
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.33
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.33
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 31 0.43
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.76
SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24) 29 1.3
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 27 7.1
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 27 7.1
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 148 bits (358), Expect = 2e-36
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 APLNP 446
APLNP
Sbjct: 109 APLNP 113
Score = 103 bits (246), Expect = 9e-23
Identities = 46/51 (90%), Positives = 50/51 (98%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 148 bits (358), Expect = 2e-36
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 432 APLNP 446
APLNP
Sbjct: 108 APLNP 112
Score = 100 bits (239), Expect = 6e-22
Identities = 44/49 (89%), Positives = 49/49 (100%)
Frame = +1
Query: 115 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 148 bits (358), Expect = 2e-36
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 432 APLNP 446
APLNP
Sbjct: 108 APLNP 112
Score = 101 bits (242), Expect = 3e-22
Identities = 45/49 (91%), Positives = 49/49 (100%)
Frame = +1
Query: 115 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 148 bits (358), Expect = 2e-36
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 APLNP 446
APLNP
Sbjct: 109 APLNP 113
Score = 107 bits (257), Expect = 4e-24
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 148 bits (358), Expect = 2e-36
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 APLNP 446
APLNP
Sbjct: 109 APLNP 113
Score = 103 bits (246), Expect = 9e-23
Identities = 44/51 (86%), Positives = 50/51 (98%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 101 bits (242), Expect = 3e-22
Identities = 44/49 (89%), Positives = 49/49 (100%)
Frame = +1
Query: 115 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
Score = 89.4 bits (212), Expect = 1e-18
Identities = 40/43 (93%), Positives = 40/43 (93%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 380
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 72.5 bits (170), Expect = 1e-13
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Frame = +3
Query: 258 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEA 434
KD VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE
Sbjct: 53 KDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEP 112
Query: 435 PLNP 446
PLNP
Sbjct: 113 PLNP 116
Score = 44.4 bits (100), Expect = 4e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1
Query: 127 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 225
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 1e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 234
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 59.7 bits (138), Expect = 1e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 234
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 42.7 bits (96), Expect = 1e-04
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +3
Query: 360 KIWHHTFYNELRVAPEEHPVLLTEAPLNP 446
K+W H F ++LRV E+ PVLLTEAPLNP
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNP 2157
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 55.2 bits (127), Expect = 2e-08
Identities = 25/55 (45%), Positives = 32/55 (58%)
Frame = +3
Query: 261 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 425
D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 283 DFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 4e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 103 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 249
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 2e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 231 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 115
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 35.1 bits (77), Expect = 0.027
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 318 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 443
PI+ G++ +WD EKI + + ++ HP+L++EA N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWN 44
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 34.3 bits (75), Expect = 0.047
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Frame = +3
Query: 243 GRYGQKDS---YVGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 404
GR G+ DS VG++ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 405 EEHPVLLTEAPLNP 446
HPV++TE NP
Sbjct: 165 VNHPVIMTEPVCNP 178
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 34.3 bits (75), Expect = 0.047
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 267 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 389
++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 4.0
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 121 EVAALVVDNGSGMCKAGFAGDDAPRAV 201
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.33
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 206 GNTARGASSPAKPALHIPEPLSTT 135
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.33
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 206 GNTARGASSPAKPALHIPEPLSTT 135
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 31.1 bits (67), Expect = 0.43
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 408 EHPVLLTEAPLNP 446
+HPVLLTEAPLNP
Sbjct: 126 QHPVLLTEAPLNP 138
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 0.76
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 206 GNTARGASSPAKPALHIPEPLSTT 135
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24)
Length = 1592
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -2
Query: 443 VEGSLSEQDWVFLGGDTQLIVEGMMPNLLHVI 348
+ SL++Q+W + D Q+IVEG M N ++I
Sbjct: 1329 IRQSLTKQEWRWQMDDPQMIVEGAMQNHYNMI 1360
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 206 GNTARGASSPAKPALHIPEPLSTT 135
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 206 GNTARGASSPAKPALHIPEPLSTT 135
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 221 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 111
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 27.1 bits (57), Expect = 7.1
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Frame = -3
Query: 412 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASS--PT*ESFCPYRPS 239
CS + + C + ++V CS + V + ++C+ P PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 238 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 146
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 127 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 231
+ +++D GS KAGFA ++A + + S++G H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 106 KMCDEEVAALVVDNG-SGMCKAGFAGD 183
++CD++ + +N MCKAG+ GD
Sbjct: 487 RLCDKDAVCRLENNAIKCMCKAGYTGD 513
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,085,982
Number of Sequences: 59808
Number of extensions: 381879
Number of successful extensions: 1052
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 883875528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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