Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0915
(447 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 148 2e-36
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 148 2e-36
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 148 2e-36
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 148 2e-36
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 148 2e-36
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 148 2e-36
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 148 2e-36
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 148 2e-36
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 148 2e-36
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 148 2e-36
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 147 3e-36
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 108 2e-24
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 108 2e-24
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 107 4e-24
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 107 4e-24
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 93 6e-20
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 73 7e-14
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 70 9e-13
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 40 8e-04
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 36 0.010
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 36 0.010
U80844-4|AAB37974.1| 192|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 3.6
Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical pr... 27 4.7
AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear recep... 27 4.7
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 4.7
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 4.7
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 4.7
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 4.7
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 6.2
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 27 8.2
Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical p... 27 8.2
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 27 8.2
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 148 bits (358), Expect = 2e-36
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 APLNP 446
APLNP
Sbjct: 109 APLNP 113
Score = 108 bits (260), Expect = 2e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 148 bits (358), Expect = 2e-36
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 APLNP 446
APLNP
Sbjct: 109 APLNP 113
Score = 107 bits (257), Expect = 4e-24
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 148 bits (358), Expect = 2e-36
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 APLNP 446
APLNP
Sbjct: 109 APLNP 113
Score = 108 bits (260), Expect = 2e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 148 bits (358), Expect = 2e-36
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 APLNP 446
APLNP
Sbjct: 109 APLNP 113
Score = 108 bits (260), Expect = 2e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 148 bits (358), Expect = 2e-36
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 APLNP 446
APLNP
Sbjct: 109 APLNP 113
Score = 108 bits (260), Expect = 2e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 148 bits (358), Expect = 2e-36
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 APLNP 446
APLNP
Sbjct: 109 APLNP 113
Score = 105 bits (253), Expect = 1e-23
Identities = 45/51 (88%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 148 bits (358), Expect = 2e-36
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 APLNP 446
APLNP
Sbjct: 109 APLNP 113
Score = 108 bits (260), Expect = 2e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 148 bits (358), Expect = 2e-36
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 64
Query: 432 APLNP 446
APLNP
Sbjct: 65 APLNP 69
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 148 bits (358), Expect = 2e-36
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 35 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 94
Query: 432 APLNP 446
APLNP
Sbjct: 95 APLNP 99
Score = 70.1 bits (164), Expect = 7e-13
Identities = 30/33 (90%), Positives = 33/33 (100%)
Frame = +1
Query: 163 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 37
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 148 bits (358), Expect = 2e-36
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 APLNP 446
APLNP
Sbjct: 109 APLNP 113
Score = 108 bits (260), Expect = 2e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 147 bits (357), Expect = 3e-36
Identities = 64/65 (98%), Positives = 65/65 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTE 107
Query: 432 APLNP 446
APLNP
Sbjct: 108 APLNP 112
Score = 102 bits (244), Expect = 1e-22
Identities = 45/49 (91%), Positives = 49/49 (100%)
Frame = +1
Query: 115 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 108 bits (260), Expect = 2e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 1e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 365
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 108 bits (260), Expect = 2e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 1e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 365
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 107 bits (257), Expect = 4e-24
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 1e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 365
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 107 bits (257), Expect = 4e-24
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 80.2 bits (189), Expect = 6e-16
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 356
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 93.5 bits (222), Expect = 6e-20
Identities = 37/63 (58%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Frame = +3
Query: 261 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAP 437
D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+AP
Sbjct: 54 DIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAP 113
Query: 438 LNP 446
LNP
Sbjct: 114 LNP 116
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 249
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 73.3 bits (172), Expect = 7e-14
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +3
Query: 237 RDGRYGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 413
R G KD VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 414 PVLLTEAPLNP 446
+LLTE PLNP
Sbjct: 106 KLLLTEPPLNP 116
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 225
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 69.7 bits (163), Expect = 9e-13
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +3
Query: 261 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 437
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE P
Sbjct: 64 DFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPP 123
Query: 438 LN 443
LN
Sbjct: 124 LN 125
Score = 36.7 bits (81), Expect = 0.008
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 216
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 39.9 bits (89), Expect = 8e-04
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 321 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 443
++ G++ +W+ EKI H++ N L P EHPVL +E+ N
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWN 134
Score = 33.5 bits (73), Expect = 0.072
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 216
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.010
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 225 PPSGRDGRYGQKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTF 380
P S ++ +K +V E + +L Y PIE G V NWD ++IW TF
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.010
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 225 PPSGRDGRYGQKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTF 380
P S ++ +K +V E + +L Y PIE G V NWD ++IW TF
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U80844-4|AAB37974.1| 192|Caenorhabditis elegans Hypothetical
protein C07D8.2 protein.
Length = 192
Score = 28.7 bits (61), Expect = 2.0
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 249 YGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 428
+GQ +G A + G L+ P+EH I T + + +L P E P+L+
Sbjct: 66 HGQHGQQLGAPAHTNGGTTRLQQPLEHRIQTTTQGVLQ----GKREQLEQGPTETPLLVQ 121
Query: 429 EAP 437
+AP
Sbjct: 122 QAP 124
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 3.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 163 KAGFAGDDAPRAVFPSIVGRPRHQG 237
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical
protein C28D4.1 protein.
Length = 437
Score = 27.5 bits (58), Expect = 4.7
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 294 FCSVPHLLHKSPSAHTDHHALMAGPSHDRGEHGARSIISCE 172
F SV + ++PS +D L+ G H + +GA S C+
Sbjct: 5 FNSVSKIQWRNPSPVSDTSCLVCGDPHGKRHYGAMSCNGCK 45
>AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 437
Score = 27.5 bits (58), Expect = 4.7
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 294 FCSVPHLLHKSPSAHTDHHALMAGPSHDRGEHGARSIISCE 172
F SV + ++PS +D L+ G H + +GA S C+
Sbjct: 5 FNSVSKIQWRNPSPVSDTSCLVCGDPHGKRHYGAMSCNGCK 45
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 188 ASSPAKPALHIPEPLSTTNAATSS 117
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 188 ASSPAKPALHIPEPLSTTNAATSS 117
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 188 ASSPAKPALHIPEPLSTTNAATSS 117
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 188 ASSPAKPALHIPEPLSTTNAATSS 117
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 315 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 416
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 315 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 416
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 379 STMSCVSPPRNTQSCSLRLP 438
ST C SP +TQ+C RLP
Sbjct: 297 STQVCASPLNSTQTCIPRLP 316
>Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical
protein Y69H2.10a protein.
Length = 572
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 379 STMSCVSPPRNTQSCSLRLP 438
ST C SP +TQ+C RLP
Sbjct: 297 STQVCASPLNSTQTCIPRLP 316
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 26.6 bits (56), Expect = 8.2
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Frame = -3
Query: 370 CQIFSMSSQLVTIPC-SMGYLRVRIPL----LLCASSPT*ESFCPYRPSRPDG 227
CQ+FS QLVT+ SMG +++++ + LL + S T + P P DG
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAP-NPPEIDG 302
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +3
Query: 342 NWDDMEKIWHHTFYNE--LRVAPEEHPV 419
+++D++ IWHH Y E L+ E +PV
Sbjct: 172 HYNDLQDIWHHARYKESQLKRGKELNPV 199
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,439,144
Number of Sequences: 27780
Number of extensions: 257810
Number of successful extensions: 843
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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