Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0915
(447 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 145 1e-35
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 145 1e-35
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 144 2e-35
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 144 2e-35
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 144 2e-35
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 144 2e-35
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 142 1e-34
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 142 1e-34
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 142 1e-34
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 132 1e-31
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 121 3e-28
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 116 7e-27
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 80 6e-16
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 71 4e-13
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 7e-11
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 62 2e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 44 5e-05
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 1e-04
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 37 0.007
At3g12650.1 68416.m01575 expressed protein 30 0.82
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 29 1.9
At1g71850.1 68414.m08303 expressed protein ; expression supporte... 28 2.5
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 2.5
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 2.5
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 3.3
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 4.4
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 27 5.8
At4g10350.1 68417.m01700 no apical meristem (NAM) family protein... 27 5.8
At3g58650.1 68416.m06537 expressed protein 27 5.8
At3g45240.1 68416.m04882 protein kinase family protein contains ... 27 5.8
At5g01400.1 68418.m00053 expressed protein contains low similari... 27 7.6
At2g35640.1 68415.m04371 hydroxyproline-rich glycoprotein family... 27 7.6
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 145 bits (351), Expect = 1e-35
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 432 APLNP 446
APLNP
Sbjct: 110 APLNP 114
Score = 86.6 bits (205), Expect = 7e-18
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 145 bits (351), Expect = 1e-35
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 432 APLNP 446
APLNP
Sbjct: 110 APLNP 114
Score = 86.6 bits (205), Expect = 7e-18
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 144 bits (350), Expect = 2e-35
Identities = 63/65 (96%), Positives = 64/65 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 432 APLNP 446
APLNP
Sbjct: 110 APLNP 114
Score = 86.6 bits (205), Expect = 7e-18
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 144 bits (350), Expect = 2e-35
Identities = 63/65 (96%), Positives = 64/65 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 432 APLNP 446
APLNP
Sbjct: 110 APLNP 114
Score = 86.6 bits (205), Expect = 7e-18
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 144 bits (349), Expect = 2e-35
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 432 APLNP 446
APLNP
Sbjct: 110 APLNP 114
Score = 86.6 bits (205), Expect = 7e-18
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 144 bits (349), Expect = 2e-35
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 432 APLNP 446
APLNP
Sbjct: 110 APLNP 114
Score = 86.6 bits (205), Expect = 7e-18
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 142 bits (343), Expect = 1e-34
Identities = 60/64 (93%), Positives = 64/64 (100%)
Frame = +3
Query: 255 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 434
QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEA
Sbjct: 51 QKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEA 110
Query: 435 PLNP 446
PLNP
Sbjct: 111 PLNP 114
Score = 82.2 bits (194), Expect = 1e-16
Identities = 34/48 (70%), Positives = 42/48 (87%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM ++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 142 bits (343), Expect = 1e-34
Identities = 60/64 (93%), Positives = 64/64 (100%)
Frame = +3
Query: 255 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 434
QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEA
Sbjct: 51 QKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEA 110
Query: 435 PLNP 446
PLNP
Sbjct: 111 PLNP 114
Score = 82.2 bits (194), Expect = 1e-16
Identities = 34/48 (70%), Positives = 42/48 (87%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM ++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 142 bits (343), Expect = 1e-34
Identities = 60/64 (93%), Positives = 64/64 (100%)
Frame = +3
Query: 255 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 434
QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEA
Sbjct: 51 QKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEA 110
Query: 435 PLNP 446
PLNP
Sbjct: 111 PLNP 114
Score = 82.2 bits (194), Expect = 1e-16
Identities = 34/48 (70%), Positives = 42/48 (87%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM ++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 132 bits (318), Expect = 1e-31
Identities = 53/64 (82%), Positives = 63/64 (98%)
Frame = +3
Query: 255 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 434
+KD++VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEA
Sbjct: 52 EKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEA 111
Query: 435 PLNP 446
PLNP
Sbjct: 112 PLNP 115
Score = 83.4 bits (197), Expect = 6e-17
Identities = 36/48 (75%), Positives = 42/48 (87%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEK 53
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 121 bits (291), Expect = 3e-28
Identities = 49/64 (76%), Positives = 60/64 (93%)
Frame = +3
Query: 255 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 434
+ D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEA
Sbjct: 6 ENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEA 65
Query: 435 PLNP 446
PLNP
Sbjct: 66 PLNP 69
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 116 bits (279), Expect = 7e-27
Identities = 52/70 (74%), Positives = 57/70 (81%)
Frame = +3
Query: 237 RDGRYGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 416
RDG +SYVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDG-LNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 417 VLLTEAPLNP 446
VLLTEAP NP
Sbjct: 94 VLLTEAPYNP 103
Score = 52.4 bits (120), Expect = 1e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 228
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 80.2 bits (189), Expect = 6e-16
Identities = 32/63 (50%), Positives = 42/63 (66%)
Frame = +3
Query: 258 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 437
KD VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ P
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPP 110
Query: 438 LNP 446
LNP
Sbjct: 111 LNP 113
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 225
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 70.9 bits (166), Expect = 4e-13
Identities = 35/65 (53%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Frame = +3
Query: 261 DSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 432 APLNP 446
+PL P
Sbjct: 127 SPLTP 131
Score = 35.9 bits (79), Expect = 0.012
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 130 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 216
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 63.3 bits (147), Expect = 7e-11
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +3
Query: 240 DGRYGQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 416
D G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 417 VLLTEAPLN 443
+LL E PLN
Sbjct: 121 MLLAEPPLN 129
Score = 57.2 bits (132), Expect = 5e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 219
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 62.1 bits (144), Expect = 2e-10
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = +3
Query: 267 YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 443
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Score = 56.8 bits (131), Expect = 6e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 219
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 309 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 443
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLS 105
Score = 32.7 bits (71), Expect = 0.12
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 225
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 42.7 bits (96), Expect = 1e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 234
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 36.7 bits (81), Expect = 0.007
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = -2
Query: 368 PNLLHVIPVSDDSVFDGVFEGQDT--SFALCLISYIRVL-LPIPTITP*WRGLPTIEGNT 198
P L V+ ++ D + + + + YI + +P P I P RGL +G T
Sbjct: 249 PYLTDVMILTPGQTVDALLTADQAIGKYYMATLPYISAIGIPTPDIKP-TRGLIVYQGAT 307
Query: 197 ARGASSPAKPALHIPEPLSTTNAATSS 117
+ +SSPA+P + +P +ST + TS+
Sbjct: 308 S--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g12650.1 68416.m01575 expressed protein
Length = 238
Score = 29.9 bits (64), Expect = 0.82
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2
Query: 443 VEGSLSEQDWVFLGGDTQLIVEGMMPNL 360
+EG E+D LG +T+ ++EGMM N+
Sbjct: 99 IEGPTVERDLSALGNETRQVLEGMMKNM 126
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 28.7 bits (61), Expect = 1.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 318 PIEHGIVTNWDDMEKIWHHTFYNEL 392
PIE G++ +WD ME + + Y L
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGL 81
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 130 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 222
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g71850.1 68414.m08303 expressed protein ; expression supported
by MPSS
Length = 470
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 207 LDRGKAPPSGRDGRYGQKDSYVGDEAQSKRGILTLK 314
L+RG+ S R GR +S D+AQS+R ++LK
Sbjct: 426 LERGRRNSSPRSGRRSFGNSGSRDKAQSRRSKISLK 461
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 276 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 404
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 276 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 404
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 3.3
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 364 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 275
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 230 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 108
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 27.1 bits (57), Expect = 5.8
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 415 GCSSGATRSSL*-KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESF 257
GC G T++ L C+ +S+ + TIP + Y + PL LC T + +
Sbjct: 454 GCKRGLTKNRLQCSTLCE-YSICYECATIPSELHYKYDKHPLTLCYGEDTDDKY 506
>At4g10350.1 68417.m01700 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
nap gene, Arabidopsis thaliana, gb:AJ222713
Length = 341
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -1
Query: 282 PHLLHKSPSAHTDHHALMAGPSHDRGEHGARSIISCETGL 163
P + HK PS D+ + +A S G + +CE GL
Sbjct: 227 PPIFHKPPSLGFDYSSGLARDSESAASEGLQYQQACEPGL 266
>At3g58650.1 68416.m06537 expressed protein
Length = 723
Score = 27.1 bits (57), Expect = 5.8
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +3
Query: 201 VPLDRGKAPPSGRDGRYGQKDSYVGDEAQSKRGILTLK--YPIEHGIVTNWDDMEK 362
+PL R K+ P + R G ++S + ++ + KRG ++K I+ T+ DD ++
Sbjct: 308 LPLSRKKSLPRSKKPRNGVQESGIYEDKRIKRGEKSIKCNISIDGDSSTSKDDQKR 363
>At3g45240.1 68416.m04882 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 396
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 210 DRGKAPPSGRDGRYGQKDSYVGDEAQSKRGILTLKYPIEHGIV 338
D G+ G D G+++ V + ++SKR LK +++G+V
Sbjct: 39 DSGETSNPGGDDEEGEEEEEVEELSRSKRSEEILKCKLQNGLV 81
>At5g01400.1 68418.m00053 expressed protein contains low similarity to
symplekin SP:Q92797 from [Homo sapiens]
Length = 1467
Score = 26.6 bits (56), Expect = 7.6
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = -2
Query: 284 CLISYIRVLLPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 117
CL Y + + I R + + N + AS P K A+H+ P+ +SS
Sbjct: 930 CLSLYFALCTKVLRIFTILRLMTNLVFNIYKNASDPVKQAIHLQIPILVRTMGSSS 985
>At2g35640.1 68415.m04371 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 340
Score = 26.6 bits (56), Expect = 7.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 373 IPSTMSCVSPPRNTQSCSLRLPSTP 447
IP+T+ PP QS SL LPS P
Sbjct: 187 IPTTIVLSLPPPPPQSLSLSLPSPP 211
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,881,705
Number of Sequences: 28952
Number of extensions: 244975
Number of successful extensions: 656
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 722638680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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