Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0914
         (554 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0BRN4 Cluster: Chromosome undetermined scaffold_123, w...    34   2.6  
UniRef50_Q6C809 Cluster: Similar to tr|Q9Y7C3 Candida albicans S...    33   4.5  

>UniRef50_A0BRN4 Cluster: Chromosome undetermined scaffold_123,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_123,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 4023

 Score = 33.9 bits (74), Expect = 2.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 407 NFQLFHYFTESTNWRIVVKYSSPIYESQMI 496
           N+ LFH      NW + V+YS+P Y  + +
Sbjct: 305 NYSLFHEIANKENWELFVQYSNPYYHQKSL 334


>UniRef50_Q6C809 Cluster: Similar to tr|Q9Y7C3 Candida albicans
           Suppressor of ROK1; n=1; Yarrowia lipolytica|Rep:
           Similar to tr|Q9Y7C3 Candida albicans Suppressor of ROK1
           - Yarrowia lipolytica (Candida lipolytica)
          Length = 733

 Score = 33.1 bits (72), Expect = 4.5
 Identities = 17/37 (45%), Positives = 23/37 (62%)
 Frame = -3

Query: 114 SCMIIKKKTDLAYYCCVMXEINQTILFCSECINGCDD 4
           S M  K K DLAYYCC + + ++T    S+C + CDD
Sbjct: 2   SHMTDKMKEDLAYYCCDLSDCSET----SDC-DSCDD 33


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,271,405
Number of Sequences: 1657284
Number of extensions: 9230640
Number of successful extensions: 15360
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15360
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)