Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0914
         (554 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   3.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   3.6  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   3.6  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   8.4  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   8.4  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 327 FFILPPGQYLKNDGSFKDQIN 265
           F +LP G+ L +   F DQI+
Sbjct: 185 FHLLPTGELLVHSLEFSDQIH 205


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 327 FFILPPGQYLKNDGSFKDQIN 265
           F +LP G+ L +   F DQI+
Sbjct: 185 FHLLPTGELLVHSLEFSDQIH 205


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 496 YHLRLVDRTRILYDNAPICGFRKIMEKL 413
           Y +R   RT   +DN+   GF KI E L
Sbjct: 406 YDVRDGCRTPFQWDNSINAGFSKIAENL 433


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 126 RER*SCMIIKKKTDLAYYC 70
           RE  SC+I K++ +   YC
Sbjct: 147 REEKSCIIDKRQRNRCQYC 165


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 126 RER*SCMIIKKKTDLAYYC 70
           RE  SC+I K++ +   YC
Sbjct: 147 REEKSCIIDKRQRNRCQYC 165


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,307
Number of Sequences: 438
Number of extensions: 3014
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)