Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0913
         (505 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084197-4|AAO38575.1|  335|Caenorhabditis elegans Serpentine re...    29   2.5  
AC024753-1|AAF60456.1|  732|Caenorhabditis elegans Hypothetical ...    27   5.8  

>AC084197-4|AAO38575.1|  335|Caenorhabditis elegans Serpentine
           receptor, class v protein27 protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +1

Query: 292 FVRLVHFQFQNETIKRTNAPVRSVVYVILYVPCAILKFYSLKRIII 429
           F+R  +F +Q   I    A   +++YV LY+ C  +   SL+R ++
Sbjct: 76  FIRQFYFDYQEYYIA---AATYNIIYVSLYIRCTGIILLSLQRYLV 118


>AC024753-1|AAF60456.1|  732|Caenorhabditis elegans Hypothetical
           protein Y23H5B.6 protein.
          Length = 732

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 155 EHMKNFKISRTKKFMRPITKVSSSPQCIYVKL 60
           E + N  IS+TK   + +TKVS++ + +  KL
Sbjct: 579 EKISNITISKTKPLKKAVTKVSAAKKILNKKL 610


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,904,182
Number of Sequences: 27780
Number of extensions: 175330
Number of successful extensions: 385
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 385
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)