Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0910
         (536 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0470 + 23977394-23977503,23977755-23977922,23978724-239793...    31   0.44 
07_03_0909 + 22512313-22512474,22513151-22513465,22513539-225166...    29   3.1  
02_04_0552 - 23804154-23805326                                         28   4.1  
02_01_0424 - 3097245-3099377                                           28   5.4  
12_02_0313 + 17404002-17406410                                         27   9.5  
03_05_0165 + 21435948-21436144,21436234-21436318,21436690-214367...    27   9.5  
03_01_0321 + 2512830-2513114,2513390-2513428,2513647-2513674,251...    27   9.5  

>11_06_0470 +
           23977394-23977503,23977755-23977922,23978724-23979367,
           23979584-23979823,23980175-23980296,23980397-23981080
          Length = 655

 Score = 31.5 bits (68), Expect = 0.44
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
 Frame = -1

Query: 227 SHRSLDEHVES-----EKSNTPSNFVNCVWRSFKTQTLNVPFEKLYTKWSCERI 81
           SH+S+D  V+       K+N     VNC+ RS +    +VPF K   +  C  I
Sbjct: 131 SHKSIDAAVKDTIRHLRKNNVELTKVNCILRSMRGSAESVPFTKNSVRTVCAEI 184


>07_03_0909 +
           22512313-22512474,22513151-22513465,22513539-22516633,
           22516812-22516910,22517031-22517379
          Length = 1339

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 21/52 (40%), Positives = 27/52 (51%)
 Frame = +1

Query: 58  LNECSVLSILSQLHFVYNFSNGTLSVCVLNDRHTQFTKFEGVFDFSLSTCSS 213
           +NE S LS  S+ H     SNG+L V VL    T + +FEG    S+  C S
Sbjct: 389 VNEVSFLSYNSKNHIAAYLSNGSLCVSVLPVADT-WEEFEG-SGISVDPCFS 438


>02_04_0552 - 23804154-23805326
          Length = 390

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +1

Query: 34  LLSVAHRQLNECSVLSILSQLHFVYNFSNGTLSVCVLNDRHTQ 162
           ++S+A   LN    L   S+LH +  +S+  +S CVL   +TQ
Sbjct: 348 VISIARWTLNPPGALPWSSELHELTGYSSQDISSCVLTVLNTQ 390


>02_01_0424 - 3097245-3099377
          Length = 710

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 5/53 (9%)
 Frame = +1

Query: 70  SVLSILSQLHFVYNFSNGTLSVCV-----LNDRHTQFTKFEGVFDFSLSTCSS 213
           S LS L  LH  YN   GT+   V     LN     F KF G   F ++   S
Sbjct: 339 SKLSSLKSLHVSYNSFAGTIPESVYTCSNLNALQLSFNKFHGQLSFRITNLKS 391


>12_02_0313 + 17404002-17406410
          Length = 802

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/48 (22%), Positives = 22/48 (45%)
 Frame = -3

Query: 315 PPGHVSCVHFFTSTITRX*RSAVSTGARDIASIPRRACRK*KVKHTFK 172
           P G   C+   T+ +T+      +    ++  +P   CRK  V++ F+
Sbjct: 290 PSGRSGCMILITTRLTKIASELKTLEPYEVPKLPHEECRKIFVRYAFR 337


>03_05_0165 +
           21435948-21436144,21436234-21436318,21436690-21436768,
           21436892-21437005,21437249-21437361,21437570-21437677,
           21437760-21437879
          Length = 271

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +1

Query: 193 SLSTCSSRDRCDISGARRNRAPSXASDRRCKKVNTGNMSGRIVNADAS 336
           +LS+CS       +  RR R P+ A+   C + ++ + S R+V   A+
Sbjct: 3   TLSSCSRLSTGGGAVQRRPRRPASAATITCHRSSSSSSSARVVRTGAA 50


>03_01_0321 +
           2512830-2513114,2513390-2513428,2513647-2513674,
           2513893-2513975,2514104-2514144,2514539-2514624,
           2514941-2514963
          Length = 194

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +1

Query: 16  GGCSGRLLSVAHRQLNE--CSVLSILSQLHFVYNFSN 120
           G C   LLS   + L +  C  LS+ S  HF+YN ++
Sbjct: 133 GCCMQLLLSKLSKMLCDINCDPLSLYSSFHFLYNLTS 169


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,980,633
Number of Sequences: 37544
Number of extensions: 280666
Number of successful extensions: 738
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)