Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0908
         (741 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0996 + 33667663-33667900,33668019-33668091,33668785-336688...    32   0.42 
06_03_1104 + 27623632-27623795,27624052-27624175,27624316-276248...    29   3.9  
03_01_0630 + 4635297-4636220                                           29   5.1  
10_07_0188 + 13921731-13921938,13922076-13922338,13922463-13923257     28   6.8  

>01_06_0996 +
           33667663-33667900,33668019-33668091,33668785-33668841,
           33668970-33669067,33669482-33669637,33669744-33670366,
           33670484-33670560,33671551-33671805,33671950-33672067,
           33672174-33672345,33672434-33672975
          Length = 802

 Score = 32.3 bits (70), Expect = 0.42
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -2

Query: 497 SSANQRLEXSYTIAFKSTHPEPAGGAFHMTWTSVLGRSSASTTEFVHS 354
           S   Q+++  Y    KSTHP+    + H   T+VLG    S    +H+
Sbjct: 87  SHLKQKIKPFYHFKGKSTHPDDVIASHHDMLTTVLGSKEDSLASIIHN 134


>06_03_1104 +
           27623632-27623795,27624052-27624175,27624316-27624832,
           27624943-27625073,27625161-27625567,27625690-27625963,
           27626195-27626814,27627424-27627859
          Length = 890

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +2

Query: 143 HYRLIVNGEVERYAPDQRYVVTLVGSRTHDVVQQFAG 253
           HY+ I+ G +   + D   ++T+ G RT  +V ++AG
Sbjct: 325 HYQHIIEGTINAMSRDDERLLTIEGCRTALLVLRYAG 361


>03_01_0630 + 4635297-4636220
          Length = 307

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 22/84 (26%), Positives = 34/84 (40%)
 Frame = +1

Query: 349 DEECTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVYXNSSRWFAEDGQLTNESART 528
           D+    +V  +  LP  E +  W  P +   C   K  VY  +  W A     + E A  
Sbjct: 229 DDASAATVGCSSSLPALESK--WHGPYSDDSC---KGGVYGFTEEWLAA---CSGEMAGN 280

Query: 529 RLCPSPTAAPATTLNIGWCSRGSD 600
                 +   A+ LN GWC+ G++
Sbjct: 281 DAAGFFSDEHASNLNFGWCASGNE 304


>10_07_0188 + 13921731-13921938,13922076-13922338,13922463-13923257
          Length = 421

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 310 PVCWAPSLCPGSKD 269
           PVCWAP   PGS D
Sbjct: 241 PVCWAPPSAPGSYD 254


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,042,147
Number of Sequences: 37544
Number of extensions: 451417
Number of successful extensions: 1264
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)