Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0907
(736 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.004
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 38 0.008
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.008
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 38 0.011
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 38 0.011
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 37 0.015
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.015
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.015
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.015
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.019
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 37 0.019
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 37 0.019
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.045
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 36 0.045
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 35 0.060
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.060
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.079
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.079
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 34 0.10
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 34 0.10
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 34 0.10
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.10
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 34 0.10
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 33 0.18
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.24
SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 33 0.24
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.32
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.55
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.97
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.97
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 31 1.3
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.7
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_3357| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_215| Best HMM Match : ALG3 (HMM E-Value=0.18) 29 3.9
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 28 6.8
SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027) 28 9.0
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +1
Query: 172 HAVLFGGTCGGSIISPKWILTAGHCTLLRTVITYWPVL 285
H G CGGS+I+P+W+LTAGHC L Y VL
Sbjct: 80 HVTPHGFVCGGSLIAPQWVLTAGHCILTEDPEKYRVVL 117
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 187 GGTCGGSIISPKWILTAGHCTL 252
G CGGSII P W++TAGHC +
Sbjct: 7 GHWCGGSIIDPHWVVTAGHCVV 28
Score = 35.5 bits (78), Expect = 0.045
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGGS+I P WILT+ HC
Sbjct: 275 CGGSLIDPYWILTSSHC 291
Score = 34.3 bits (75), Expect = 0.10
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGGS+I +W++T+GHC
Sbjct: 561 CGGSLIDKQWVVTSGHC 577
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHCTLLRTVITYWPVLTNQTTKAALFA 318
CGG++ISP W+LTAGHC + + + V+ ++AL A
Sbjct: 461 CGGTLISPDWVLTAGHCVHGQLDPSGYTVVVGTLNQSALSA 501
Score = 33.9 bits (74), Expect = 0.14
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGG++IS +W++TA HC
Sbjct: 872 CGGALISDRWVVTASHC 888
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 187 GGTCGGSIISPKWILTAGHCTLLRTVITYWPVL 285
G CGGS+++P W+LTA HC L Y VL
Sbjct: 55 GFICGGSLVAPGWVLTAAHCILSDDASKYKVVL 87
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHCTLLR 258
CGGS+IS KW+LTA HC R
Sbjct: 133 CGGSLISEKWVLTAAHCVTHR 153
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 37.9 bits (84), Expect = 0.008
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGGS+I+P+W+LTA HC
Sbjct: 63 CGGSLITPEWVLTAAHC 79
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 37.9 bits (84), Expect = 0.008
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGGS+I+P+W+LTA HC
Sbjct: 106 CGGSLITPEWVLTAAHC 122
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 37.5 bits (83), Expect = 0.011
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHCTL 252
CGGS++SP W+LTA HC +
Sbjct: 56 CGGSLLSPLWLLTAAHCVI 74
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 37.5 bits (83), Expect = 0.011
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGGS+I+P+WILTA HC
Sbjct: 37 CGGSLIAPQWILTATHC 53
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Frame = +1
Query: 61 PQPGANDIPDLKQKSALVTTEFTKTQSDVKAVHERFP-HAVL---FGGT-CGGSIISPKW 225
P P D P T+ KA +P A+L +GG CGG+++ P+W
Sbjct: 116 PAPPGPDTPAPPAPGGCGAKPHTRIVGGTKAPPGAWPWQAMLRSNYGGQFCGGTLVHPQW 175
Query: 226 ILTAGHCTLLR 258
++TA HC R
Sbjct: 176 VITAAHCVYRR 186
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 37.1 bits (82), Expect = 0.015
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGGS+I P+W+LTA HC
Sbjct: 286 CGGSLIHPEWVLTAAHC 302
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 37.1 bits (82), Expect = 0.015
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 187 GGTCGGSIISPKWILTAGHC 246
G CGG+++SP+W++TA HC
Sbjct: 374 GHHCGGTLVSPQWVVTAAHC 393
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 37.1 bits (82), Expect = 0.015
Identities = 11/17 (64%), Positives = 16/17 (94%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGGS+++P+WI+TA HC
Sbjct: 135 CGGSVVAPEWIVTAAHC 151
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 37.1 bits (82), Expect = 0.015
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +1
Query: 193 TCGGSIISPKWILTAGHC 246
TCGGS+IS +W++TA HC
Sbjct: 131 TCGGSLISDRWVVTAAHC 148
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +1
Query: 193 TCGGSIISPKWILTA 237
TCGGS+IS +W++TA
Sbjct: 454 TCGGSLISDRWVVTA 468
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 37.1 bits (82), Expect = 0.015
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGGS+I P+W+LTA HC
Sbjct: 246 CGGSLIHPEWVLTAAHC 262
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 36.7 bits (81), Expect = 0.019
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGGS++SP W++TA HC
Sbjct: 93 CGGSLVSPTWVVTAAHC 109
Score = 36.7 bits (81), Expect = 0.019
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHCTLLR 258
CGGS+I P+W+LTA HC R
Sbjct: 690 CGGSLIHPQWVLTATHCVSSR 710
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 36.7 bits (81), Expect = 0.019
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGG++ISP W+LTA HC
Sbjct: 574 CGGNVISPWWVLTAAHC 590
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 36.7 bits (81), Expect = 0.019
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 193 TCGGSIISPKWILTAGHCTL 252
+CGG++IS KW++TA HC +
Sbjct: 501 SCGGALISSKWVITAAHCVI 520
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 36.7 bits (81), Expect = 0.019
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGGS+I P+WILTA HC
Sbjct: 80 CGGSLIHPQWILTATHC 96
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 36.3 bits (80), Expect = 0.026
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGGS+I P W+LTA HC
Sbjct: 57 CGGSLIDPGWVLTAAHC 73
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 35.9 bits (79), Expect = 0.034
Identities = 9/19 (47%), Positives = 17/19 (89%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHCTL 252
CGG++++P+W++TA HC +
Sbjct: 657 CGGTLVTPEWVITAAHCVV 675
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 35.5 bits (78), Expect = 0.045
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGGS+I P WILT+ HC
Sbjct: 15 CGGSLIDPYWILTSSHC 31
Score = 34.3 bits (75), Expect = 0.10
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGGS+I +W++T+GHC
Sbjct: 276 CGGSLIDKQWVVTSGHC 292
Score = 31.5 bits (68), Expect = 0.73
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +2
Query: 527 GYGTDEHGGVMRKDMHAMELSTQSDEVCSKLEQYNSL--DMICAKGRPPRFDSACNGDSC 700
G+G G ++ +E+ S EVC+ + YN D G P +C GDS
Sbjct: 122 GWGKTAEGSPYSPVLNELEVDIVSKEVCNANDSYNGTINDRYFCAGFPQGGRDSCGGDSG 181
Query: 701 SXLV 712
LV
Sbjct: 182 GPLV 185
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 35.5 bits (78), Expect = 0.045
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 187 GGTCGGSIISPKWILTAGHC 246
G CGGSI++ +WI+TA HC
Sbjct: 1806 GHICGGSIVNSQWIVTAAHC 1825
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 35.1 bits (77), Expect = 0.060
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 163 RFPHAVLFGGTCGGSIISPKWILTAGHCTLLRTVIT 270
RF H+ CGG++I+ +W+LTA HC IT
Sbjct: 146 RFDHSGNQMQICGGALINREWVLTAAHCFYKTNPIT 181
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 35.1 bits (77), Expect = 0.060
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHCTL 252
CGGS++S W+LTA HC +
Sbjct: 340 CGGSLLSSTWVLTAAHCVI 358
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 34.7 bits (76), Expect = 0.079
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGG+++ P+W++TA HC
Sbjct: 275 CGGTLVHPRWVVTASHC 291
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 34.7 bits (76), Expect = 0.079
Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Frame = +1
Query: 175 AVLFGGT--CGGSIISPKWILTAGHC 246
A+L GT CGGS+++ W++TA HC
Sbjct: 70 ALLMNGTQFCGGSLVNENWVVTARHC 95
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 34.3 bits (75), Expect = 0.10
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHCTLLRTVITYWPVL 285
CGG++I +W++TA HC ++++ V+
Sbjct: 73 CGGALIDREWVVTAAHCVFQEPDVSHYKVI 102
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 34.3 bits (75), Expect = 0.10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGGS+I +W+LTA HC
Sbjct: 68 CGGSLIDSEWVLTAAHC 84
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 34.3 bits (75), Expect = 0.10
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 184 FGGTCGGSIISPKWILTAGHCTLLRTVITYWPVLTNQT 297
+G CGG++++ +W+LTA C W V+ +T
Sbjct: 280 YGPVCGGTLLTSEWVLTAARCFRDNKRAGEWKVILGET 317
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 34.3 bits (75), Expect = 0.10
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +1
Query: 193 TCGGSIISPKWILTAGHC 246
+CGG++IS +W++TA HC
Sbjct: 55 SCGGTLISDRWVVTASHC 72
Score = 32.7 bits (71), Expect = 0.32
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 193 TCGGSIISPKWILTAGHCTL 252
TCG ++I P W +TA HC +
Sbjct: 352 TCGATLIRPGWAITAAHCVM 371
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 34.3 bits (75), Expect = 0.10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
C GS+I +WI+TAGHC
Sbjct: 79 CAGSLIEARWIITAGHC 95
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 33.9 bits (74), Expect = 0.14
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = +1
Query: 175 AVLFGGT---CGGSIISPKWILTAGHC 246
A+ GT CGGS+I +W++TA HC
Sbjct: 43 ALFLNGTHHRCGGSVIKSQWVVTAAHC 69
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 33.5 bits (73), Expect = 0.18
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGGS++S W++TA HC
Sbjct: 502 CGGSLVSSTWVVTAAHC 518
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 33.5 bits (73), Expect = 0.18
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGGS+I W+LTA HC
Sbjct: 417 CGGSLIHSNWVLTAAHC 433
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 33.5 bits (73), Expect = 0.18
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHCTLLR 258
CGG++I+ W+LTA HC + +
Sbjct: 1192 CGGTLIAEDWVLTAAHCVVYK 1212
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 33.1 bits (72), Expect = 0.24
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGGS+I+ +W++TA HC
Sbjct: 460 CGGSLINREWVVTAAHC 476
>SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 33.1 bits (72), Expect = 0.24
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = +1
Query: 160 ERFP-HAVLFGGT-CGGSIISPKWILTAGHC 246
ER+P H V+ T C G+++SP+ +LTA HC
Sbjct: 154 ERYPFHTVVKLSTGCTGTLVSPRHVLTAAHC 184
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 33.1 bits (72), Expect = 0.24
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CG S++SP W LTA HC
Sbjct: 111 CGASLLSPGWALTAAHC 127
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 32.7 bits (71), Expect = 0.32
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGGS+I+ W++TA HC
Sbjct: 57 CGGSLIAKDWVVTAAHC 73
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 32.7 bits (71), Expect = 0.32
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHCTLL 255
CG S+++P W LTA HC L
Sbjct: 266 CGASLLTPGWALTAAHCLTL 285
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 32.7 bits (71), Expect = 0.32
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGG++I+ W+LTA HC
Sbjct: 1266 CGGALIAADWVLTAAHC 1282
>SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 32.3 bits (70), Expect = 0.42
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 166 FP-HAVLFGGTCGGSIISPKWILTAGHC 246
FP HA + C G+++SP+W++TA C
Sbjct: 41 FPWHAYIPELQCSGALVSPRWVVTAASC 68
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 31.9 bits (69), Expect = 0.55
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGGS++ WI+TA HC
Sbjct: 66 CGGSLVPEDWIVTAAHC 82
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 31.9 bits (69), Expect = 0.55
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGG++I +W++TA HC
Sbjct: 314 CGGTLIDTEWVVTAAHC 330
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Frame = +2
Query: 527 GYGTDEHGGVMRKDMHAMELSTQSDEVCSKLE----QYNSLDMICAKGRPPRFDSACNGD 694
G+G E+G + + + S E C ++ + + + M+CA S C+GD
Sbjct: 416 GWGMTEYGNAGARLLQQARIPVVSSEECERVNNKHRKVDKVTMLCAGNGGNSSISGCHGD 475
Query: 695 SCSXLV--DGEGRLV 733
S V G+GR V
Sbjct: 476 SGGPFVCMGGDGRWV 490
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 31.1 bits (67), Expect = 0.97
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGG++I+ W++TA HC
Sbjct: 749 CGGALIARDWVVTAAHC 765
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 31.1 bits (67), Expect = 0.97
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = +1
Query: 70 GANDIPDLKQKSAL-VTTEFTKTQSDVKAVHERFPH--AVLFGGT--CGGSIISPKWILT 234
G +P K A V F + +A +FP A+LF CGG+++ +W++T
Sbjct: 7 GVPSLPITKASRAFPVPRRFRRVVGGDEAKAGQFPWQIALLFKRQQYCGGALVHERWVVT 66
Query: 235 AGHC 246
HC
Sbjct: 67 GAHC 70
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 30.7 bits (66), Expect = 1.3
Identities = 8/17 (47%), Positives = 15/17 (88%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGG+++ P++++TA HC
Sbjct: 50 CGGTLVHPRFVVTASHC 66
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 30.3 bits (65), Expect = 1.7
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGG+++ W++TA HC
Sbjct: 240 CGGALVHEDWVVTASHC 256
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 118 TEFTKTQSDVKAVHERFPHAVLF-GGTCGGSIISPKWILTAGHC 246
TE Q + +++ + A F C G ++ PK +LTA HC
Sbjct: 97 TELKGAQRESRSIRRKLRRAQRFCPWGCTGVLVGPKHVLTAAHC 140
>SB_3357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1228
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 82 IPDLKQKSALVTTEFTKTQSDVKAVHERFPHAVLFGGTCGGSII 213
+PD+ QKS+ + +V + E F + LF GT G+II
Sbjct: 585 LPDINQKSSTPVATHALSTCEVTCM-EEFGDSALFAGTSDGNII 627
>SB_215| Best HMM Match : ALG3 (HMM E-Value=0.18)
Length = 521
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -2
Query: 162 FVYCFHIRLCLCKFSCYQRRFLF*IRYVIGAGLR*RARTCRQ 37
FV C R C C +C R LF + Y I + CRQ
Sbjct: 106 FVLCTCHRACSCNVACCVRAMLFFVLYCIVLATCCLSNACRQ 147
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -1
Query: 169 ETFRVLLSHQTVSL*IQLLPAQIFVLNPVCHWRRVEVARTHLPPARSPRE 20
+T+R L Q +S ++ LP + V P R+ + TH+ R PR+
Sbjct: 511 QTYRQNLLQQPISRSLECLPLRPVVDQPFLRNHRLTASGTHINGGRIPRD 560
>SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027)
Length = 379
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 127 TKTQSDVKAVHER-FPHAVLFGGTCGGSIISPKWILTAGHC 246
T+ + ++AV F V C G++IS + +LT+ HC
Sbjct: 155 TRLEIPIRAVRRTPFSSIVHISTGCTGTLISTRHVLTSAHC 195
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,421,103
Number of Sequences: 59808
Number of extensions: 535325
Number of successful extensions: 1450
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1450
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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