Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0907
(736 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 33 0.21
U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like pr... 32 0.48
Z81497-4|CAB04079.2| 458|Caenorhabditis elegans Hypothetical pr... 31 0.64
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 30 2.0
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 29 2.6
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 29 3.4
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 29 3.4
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 29 3.4
AL024499-5|CAC42318.1| 562|Caenorhabditis elegans Hypothetical ... 29 4.5
AL024499-3|CAA19707.1| 618|Caenorhabditis elegans Hypothetical ... 29 4.5
AF031840-1|AAC13676.1| 562|Caenorhabditis elegans GLY6c protein. 29 4.5
AF031838-1|AAC13674.1| 618|Caenorhabditis elegans GLY6a protein. 29 4.5
U27312-2|AAA68246.4| 206|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical p... 28 7.9
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 28 7.9
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 33.1 bits (72), Expect = 0.21
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGGS+I P ++LTA HC
Sbjct: 84 CGGSLIDPNFVLTAAHC 100
>U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like
protein protein 8 protein.
Length = 594
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 64 QPGANDIPDLKQKSALVTTEFTKTQS 141
+PG+ DI DLKQK A++T EF +S
Sbjct: 55 KPGSTDINDLKQKIAVLTKEFQGKES 80
>Z81497-4|CAB04079.2| 458|Caenorhabditis elegans Hypothetical
protein F10C2.7 protein.
Length = 458
Score = 31.5 bits (68), Expect = 0.64
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = +1
Query: 76 NDIPDLKQKSALVTTEFTKTQSDVKAVHERFPHAVLFGGTCGGSIISPKWILTAGHCTLL 255
ND P L QK + E T Q D H V + C +I WI + T L
Sbjct: 205 NDDPQLNQKVS--AKELTTIQKDKTKAHIERDSFVPYWEICKNRVILTVWINSFFEMTTL 262
Query: 256 RTVITYWPV 282
++TY P+
Sbjct: 263 ILLLTYSPI 271
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 187 GGTCGGSIISPKWILTAGHCTL 252
G CG ++I W++TA HC L
Sbjct: 63 GILCGATVIDDFWLVTAAHCAL 84
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 193 TCGGSIISPKWILTAGHC 246
TC G+I+SP+ IL A HC
Sbjct: 192 TCTGTIVSPRHILIATHC 209
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 151 AVHERFPHAVLFGGTCGGSIISPKWILTAGHC 246
+V RFP CGG +I+P ++T+ HC
Sbjct: 33 SVITRFPDGTT--NVCGGVLIAPSIVITSAHC 62
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHCTLLRTVITYW 276
C G++ SP+ ILTA HC T T W
Sbjct: 75 CSGTLTSPRHILTATHCAATYTE-TEW 100
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 196 CGGSIISPKWILTAGHC 246
CGG++I+ K +LTA HC
Sbjct: 62 CGGTLITLKHVLTAAHC 78
>AL024499-5|CAC42318.1| 562|Caenorhabditis elegans Hypothetical
protein H38K22.5c protein.
Length = 562
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 159 RKVSTCRSFRWYL---WRFHY*PEMDPHCGTLHTVTNGHYVLAGTNKS 293
RK C+SF+WYL ++ H+ P G + + +N LA T +S
Sbjct: 447 RKKLNCKSFKWYLQNVFQDHFLPTPLDRFGRMTSSSNSSVCLAWTLRS 494
>AL024499-3|CAA19707.1| 618|Caenorhabditis elegans Hypothetical
protein H38K22.5a protein.
Length = 618
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 159 RKVSTCRSFRWYL---WRFHY*PEMDPHCGTLHTVTNGHYVLAGTNKS 293
RK C+SF+WYL ++ H+ P G + + +N LA T +S
Sbjct: 447 RKKLNCKSFKWYLQNVFQDHFLPTPLDRFGRMTSSSNSSVCLAWTLRS 494
>AF031840-1|AAC13676.1| 562|Caenorhabditis elegans GLY6c protein.
Length = 562
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 159 RKVSTCRSFRWYL---WRFHY*PEMDPHCGTLHTVTNGHYVLAGTNKS 293
RK C+SF+WYL ++ H+ P G + + +N LA T +S
Sbjct: 447 RKKLNCKSFKWYLQNVFQDHFLPTPLDRFGRMTSSSNSSVCLAWTLRS 494
>AF031838-1|AAC13674.1| 618|Caenorhabditis elegans GLY6a protein.
Length = 618
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 159 RKVSTCRSFRWYL---WRFHY*PEMDPHCGTLHTVTNGHYVLAGTNKS 293
RK C+SF+WYL ++ H+ P G + + +N LA T +S
Sbjct: 447 RKKLNCKSFKWYLQNVFQDHFLPTPLDRFGRMTSSSNSSVCLAWTLRS 494
>U27312-2|AAA68246.4| 206|Caenorhabditis elegans Hypothetical
protein F26A1.4 protein.
Length = 206
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 462 TIKVATLDDQPNLPIGSTSDMLATELTSMGA*CVKICTPWSYQRS 596
T++ +LD +G +D+++ T++ C C PWSY++S
Sbjct: 66 TMRYMSLDAHARQDLGPKNDLVSFLYTTIE--CGDGCLPWSYEKS 108
>Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical
protein F35G12.9 protein.
Length = 135
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +2
Query: 539 DEHGGVMRKDMHAMELSTQSDEVCSKLEQYNSLDMICAKGRPPRFDSACN-----GDSC 700
D+H G++ K M ++ + VC + + + C R F+SACN GD C
Sbjct: 36 DDHPGILLKTNTRMSITVKKLHVCGEWKWLQGGEDTCGICR-MEFESACNMCKFPGDDC 93
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 596 SDEVCSKLEQYNSLDMICAKGRPPRFDSA 682
SDEVC K + D++C G P + SA
Sbjct: 63 SDEVCKKDFENGQEDVLCGAGTPKKTSSA 91
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,662,834
Number of Sequences: 27780
Number of extensions: 380592
Number of successful extensions: 1054
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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