Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0907
         (736 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    34   0.002
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   3.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.9  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   9.1  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 33.9 bits (74), Expect = 0.002
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +1

Query: 187 GGTCGGSIISPKWILTAGHCTLLRTVITYWPVLTNQTTKAALFAT*NEWSS 339
           G  CG +IIS +++LTA HC           ++   TTK A+    ++WSS
Sbjct: 185 GMICGATIISKRYVLTAAHC-----------IIDENTTKLAIVVGEHDWSS 224


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 178 VLFGGTCGGSIISPKWILTA 237
           VL G TC GS I   W+  A
Sbjct: 575 VLAGATCLGSSIKAMWLRRA 594


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -2

Query: 279  RPIRNDRS*QCAVSRSEDPFRANNGTSTGTTEKNGMWK 166
            RP+  D +   A+ ++E PFR N  T+    E   MW+
Sbjct: 1060 RPMIPDDNTSLALPKNEGPFRLNVETAKTNEE---MWE 1094


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 35  RWRQVRARYLNPAPMTYRI*NKNLRW 112
           +W QV A +LN +P   ++ N  + W
Sbjct: 653 KWLQVLALWLNHSPNYDQVTNWYMGW 678


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,114
Number of Sequences: 438
Number of extensions: 4990
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)