Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0906
         (274 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   0.77 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   2.3  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    20   4.1  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    20   5.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    19   9.5  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    19   9.5  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 0.77
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 124 LPAREGGDHRQRPGQQDH 177
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 2.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 123 TPTQEYVVPRSIPT 82
           TPT + VV R+IP+
Sbjct: 15  TPTDQRVVTRTIPS 28


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 20.2 bits (40), Expect = 4.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 89  FLLRVLLPFCIFNQSCYLFLKQ 24
           FL+ V L F +F     LF+K+
Sbjct: 139 FLIGVSLSFNLFGDLLTLFIKE 160


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 19.8 bits (39), Expect = 5.4
 Identities = 12/35 (34%), Positives = 13/35 (37%)
 Frame = +1

Query: 61  QNGKSTRSRNRSGYHVLLRWCLPAREGGDHRQRPG 165
           QN     S  R    VL+R   P   GG     PG
Sbjct: 108 QNNNPLPSPRRVAVPVLVRDGKPCLSGGPKHPDPG 142


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 19.0 bits (37), Expect = 9.5
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -2

Query: 129  WKTPTQEYVVPRSIPTAGAFAI 64
            W+  T+  +VP     AG F +
Sbjct: 940  WEGNTERVLVPGDQTEAGVFTL 961


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 19.0 bits (37), Expect = 9.5
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +3

Query: 126 SSTGRWRSSPTTRATGPLRLMLRSQTPXXSSEMPP 230
           SS  + +S+P    T P  + + + T   SS   P
Sbjct: 140 SSKLKNKSAPILTKTSPTPVSINNNTSTSSSASSP 174


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,055
Number of Sequences: 336
Number of extensions: 1424
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4471194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)