Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0906
(274 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 109 5e-26
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 109 5e-26
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 98 2e-22
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 96 9e-22
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 71 3e-14
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 49 1e-07
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 41 3e-05
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.16
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 27 0.48
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 26 1.1
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 25 1.5
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 1.9
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 25 2.5
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 24 3.4
SPBP8B7.27 |mug30||ubiquitin-protein ligase E3|Schizosaccharomyc... 24 4.4
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 24 4.4
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 24 4.4
SPBC21C3.12c |||DUF953 family protein|Schizosaccharomyces pombe|... 23 5.9
SPAC16C9.01c ||SPAC4G8.14c|carbohydrate kinase |Schizosaccharomy... 23 5.9
SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 23 5.9
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 23 5.9
SPAC19E9.03 |pas1|SPAC57A10.01|cyclin Pas1|Schizosaccharomyces p... 23 5.9
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 23 7.8
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 23 7.8
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 109 bits (263), Expect = 5e-26
Identities = 50/58 (86%), Positives = 54/58 (93%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVAMNP 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTE LIGDAAKNQVAMNP
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 109 bits (263), Expect = 5e-26
Identities = 50/58 (86%), Positives = 54/58 (93%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVAMNP 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTE LIGDAAKNQVAMNP
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 97.9 bits (233), Expect = 2e-22
Identities = 44/58 (75%), Positives = 50/58 (86%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVAMNP 253
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TE L+GDAAKNQ AMNP
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNP 65
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 95.9 bits (228), Expect = 9e-22
Identities = 42/57 (73%), Positives = 49/57 (85%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVAMNP 253
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ E L+G+AAKNQ NP
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNP 94
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 70.9 bits (166), Expect = 3e-14
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTEXLIGDAAKNQVAM 247
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D E L+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 248 NPTTQY 265
NP +
Sbjct: 109 NPENTF 114
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 48.8 bits (111), Expect = 1e-07
Identities = 20/61 (32%), Positives = 38/61 (62%)
Frame = +2
Query: 68 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVAM 247
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 248 N 250
N
Sbjct: 63 N 63
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 41.1 bits (92), Expect = 3e-05
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVAMN 250
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRN 82
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.16
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 75 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 170
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 27.1 bits (57), Expect = 0.48
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVAMNP 253
+ ID GT ++ + + G +EI+ R S VAF E + G A N P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFP 82
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 1.1
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -3
Query: 161 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARL 3
G W SP S + H ++++ +F +RVL C+ L K +K+A L
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALL 323
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 25.4 bits (53), Expect = 1.5
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 108 TLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPXXSSEMPPRTRWR*TPQHNI 266
T +L S+STG+ T++ T L + P S+ P T + TP +NI
Sbjct: 282 TSSLTSNSTGK-----TSKTTDLLIAASKKSLPSNSTPSKPNTSFFETPHNNI 329
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.0 bits (52), Expect = 1.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 61 QNGKSTRSRNRSGYHVLLRWCLPARE 138
+NGK T +R +S + W P++E
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE 502
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 24.6 bits (51), Expect = 2.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 86 GIDLGTTYSCVGVFQHGKVEIIANDQGNR 172
G LG TY+ V Q G VE+ D N+
Sbjct: 1279 GCFLGNTYAFASVTQDGSVEVHRLDVNNQ 1307
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 24.2 bits (50), Expect = 3.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 158 DQGNRTTPSYVAFTDTEXLIGDAAKNQVA 244
D+G T S+ +F D + + GDA + + A
Sbjct: 49 DEGLNTARSFSSFQDLKGMSGDAKEQESA 77
>SPBP8B7.27 |mug30||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 807
Score = 23.8 bits (49), Expect = 4.4
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 82 CGCFCHFVFLISL 44
C CFC + FL+S+
Sbjct: 384 CFCFCQYPFLLSM 396
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 23.8 bits (49), Expect = 4.4
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIAND 160
A+G LG Y+C+ +F + +A +
Sbjct: 428 AIGFKLGYIYACINLFSSFMIFFLAKE 454
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 23.8 bits (49), Expect = 4.4
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 72 KHPQ*ESIWVPRTLAL 119
KHPQ + +WVP A+
Sbjct: 131 KHPQIDGVWVPYDRAI 146
>SPBC21C3.12c |||DUF953 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 124
Score = 23.4 bits (48), Expect = 5.9
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Frame = -2
Query: 147 ISTFPCWKTPTQEYVVP---RSIPTAGAF 70
+ P WKTP E+ V ++PT G +
Sbjct: 66 VGNMPQWKTPHNEFRVKFGISAVPTLGKY 94
>SPAC16C9.01c ||SPAC4G8.14c|carbohydrate kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 23.4 bits (48), Expect = 5.9
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -1
Query: 238 LVLGGISDEXL-GVCERNIRRSGPVALVVGDDLHLPVLEDTNARVRGT--QIDSYCG 77
+VL SD L G C + + + V + LHLP ++ N V T +++CG
Sbjct: 228 VVLRNGSDGCLIGACTSSTNATSDAVVPVREILHLPSVQMKNGSVLDTTGAGNAFCG 284
>SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 600
Score = 23.4 bits (48), Expect = 5.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 164 GNRTTPSYVAFTDTEXLIGDAAKNQVAMNPTTQYS 268
GNR+T ++ L DAAKN +A YS
Sbjct: 349 GNRSTTNFSIINSGLYLKKDAAKNLLAKQFDATYS 383
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 23.4 bits (48), Expect = 5.9
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -1
Query: 139 LPVLEDTNARVRGTQIDSY 83
+P ++D + R RG+ +DS+
Sbjct: 10 MPTVKDDSTRSRGSDVDSF 28
>SPAC19E9.03 |pas1|SPAC57A10.01|cyclin Pas1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 23.4 bits (48), Expect = 5.9
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 114 ALVSSSTGRWRSSP-TTRATGPLRLMLRSQTPXXSSEMPPRT 236
AL + +T + SSP TT+ + P+ M S TP PP T
Sbjct: 209 ALKNQATRKPSSSPQTTQDSSPILTMAPS-TPVSVGSTPPST 249
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 23.0 bits (47), Expect = 7.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEII 151
K PA+G D+G T + V + GK E I
Sbjct: 306 KTPAIGFDMGGTSTDVSRYD-GKFEHI 331
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 23.0 bits (47), Expect = 7.8
Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Frame = +1
Query: 61 QNGKSTRSRNRS-GYHVLLRWCL 126
+ G R N S YHVL WCL
Sbjct: 1333 ERGSWKRGTNISYNYHVLKDWCL 1355
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,217,379
Number of Sequences: 5004
Number of extensions: 22274
Number of successful extensions: 77
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 2,362,478
effective HSP length: 61
effective length of database: 2,057,234
effective search space used: 59659786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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