Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0906
(274 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 2e-31
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 129 3e-31
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 124 8e-30
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 97 1e-21
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 66 4e-12
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-06
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 40 2e-04
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 30 0.33
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 0.77
SB_33446| Best HMM Match : 7tm_1 (HMM E-Value=6.7e-26) 28 1.0
SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1
SB_50449| Best HMM Match : Drf_DAD (HMM E-Value=0.00043) 27 3.1
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 26 4.1
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.1
SB_58559| Best HMM Match : AA_permease (HMM E-Value=1.5e-07) 26 5.4
SB_52901| Best HMM Match : WD40 (HMM E-Value=5.8) 26 5.4
SB_25450| Best HMM Match : 7tm_1 (HMM E-Value=0.088) 26 5.4
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 25 7.2
SB_18088| Best HMM Match : zf-C4 (HMM E-Value=7.56701e-44) 25 7.2
SB_5243| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.2
SB_33433| Best HMM Match : Fasciclin (HMM E-Value=1.1e-09) 25 7.2
SB_55444| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23) 25 9.5
SB_40380| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_13455| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 130 bits (313), Expect = 2e-31
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVA 244
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD E L+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 245 MNPT 256
MNPT
Sbjct: 61 MNPT 64
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 129 bits (312), Expect = 3e-31
Identities = 60/63 (95%), Positives = 61/63 (96%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVA 244
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTE LIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 245 MNP 253
MNP
Sbjct: 61 MNP 63
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 124 bits (300), Expect = 8e-30
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVA 244
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTE L+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 245 MNP 253
+NP
Sbjct: 61 LNP 63
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 97.5 bits (232), Expect = 1e-21
Identities = 45/58 (77%), Positives = 51/58 (87%), Gaps = 1/58 (1%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-EXLIGDAAKNQVAMNP 253
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ E LIGD AKNQ+ NP
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP 761
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 66.1 bits (154), Expect = 4e-12
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVA 244
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 245 MNP 253
+NP
Sbjct: 90 INP 92
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 47.2 bits (107), Expect = 2e-06
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQ 238
VG D+G + V + G +E +AN+ +R TPS+V+ D + LIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 40.3 bits (90), Expect = 2e-04
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +2
Query: 134 GKVEIIANDQGNRTTPSYVAFTDTEXLI 217
G IIAND G+R TP+ VAF+DTE LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 29.9 bits (64), Expect = 0.33
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +2
Query: 143 EIIANDQGNRTTPSYVAFT 199
++I N +G+RTTPS VAFT
Sbjct: 7 KVIENAEGSRTTPSVVAFT 25
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 0.77
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 11 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 97
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_33446| Best HMM Match : 7tm_1 (HMM E-Value=6.7e-26)
Length = 291
Score = 28.3 bits (60), Expect = 1.0
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 264 YCVVGFIATWFLAASPMRXSVSVNAT*DGVVLLPWSLAMIS-TFPCWKT 121
YCV+G I WF A S S+ + D + +L + A+I+ TFP W T
Sbjct: 131 YCVIGSI--WFFAIS--FSSIRFKISEDRLPMLWLATALIACTFPLWVT 175
>SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4232
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 167 CPGRWR*SPPSRAGRHQRKSTWY 99
C GRW S AG ++KS WY
Sbjct: 3726 CVGRWWKEIKSLAGVSEKKSRWY 3748
>SB_50449| Best HMM Match : Drf_DAD (HMM E-Value=0.00043)
Length = 801
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 142 HLPVLEDTNARVRGTQIDSYCGCFCHFVF 56
+LP +E +NAR G ++ +Y + FVF
Sbjct: 293 NLPGIEKSNARTMGNRLQAYQSSYQVFVF 321
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 26.2 bits (55), Expect = 4.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 93 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPXXSSEMPPRT 236
IW P+ L++S R+S + PLR L P SS +P T
Sbjct: 42 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 26.2 bits (55), Expect = 4.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 93 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPXXSSEMPPRT 236
IW P+ L++S R+S + PLR L P SS +P T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435
>SB_58559| Best HMM Match : AA_permease (HMM E-Value=1.5e-07)
Length = 530
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 273 GIEYCVVGFIATWFLAASPMRXSV 202
G+E C++GF T F+ S +R ++
Sbjct: 35 GLESCLIGFAGTGFIHLSILRSTI 58
>SB_52901| Best HMM Match : WD40 (HMM E-Value=5.8)
Length = 127
Score = 25.8 bits (54), Expect = 5.4
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +3
Query: 90 SIW---VPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPXXS 215
SIW +PRT A S+ + S+ TTR++ R L SQ P S
Sbjct: 75 SIWSPHIPRTFASASAEMKTFESTDTTRSSRRHRRCL-SQPPYDS 118
>SB_25450| Best HMM Match : 7tm_1 (HMM E-Value=0.088)
Length = 163
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 174 VLLPWSLAMISTFPCW 127
+ L W+LAMIS PC+
Sbjct: 40 IALTWALAMISPLPCF 55
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -1
Query: 79 GCFCHFVFLISLV 41
GCF HFVF+ S+V
Sbjct: 159 GCFYHFVFVASIV 171
>SB_18088| Best HMM Match : zf-C4 (HMM E-Value=7.56701e-44)
Length = 1220
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -1
Query: 136 PVLEDTNARVRGTQIDSYCGCFCHFVFLI 50
P+++ T A+V+ Q +++C C F +I
Sbjct: 57 PLMQSTRAKVKHRQTNTWCTTKCCFASMI 85
>SB_5243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 137 KVEIIANDQ-GNRTTPSYVAFTDTEXLIGDAAKNQV 241
KV ++ DQ N+ + A +IGD KNQV
Sbjct: 330 KVNLVIGDQINNQVEQALAAIHKVNLVIGDQIKNQV 365
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 137 KVEIIANDQ-GNRTTPSYVAFTDTEXLIGDAAKNQV 241
KV ++ DQ N+ + A +IGD KNQV
Sbjct: 396 KVNLVIGDQINNQVEQALAAIHKVSFVIGDQIKNQV 431
>SB_33433| Best HMM Match : Fasciclin (HMM E-Value=1.1e-09)
Length = 454
Score = 25.4 bits (53), Expect = 7.2
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 194 TQHKTEWSCCPG 159
T H+T++ CCPG
Sbjct: 32 THHRTDYVCCPG 43
>SB_55444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 25.0 bits (52), Expect = 9.5
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 147 SSPTTRATGPLRLMLRSQTPXXSSEMPPRT 236
SS TRA ++R+QTP SS + PRT
Sbjct: 102 SSTETRAAA----IIRTQTPGTSSRVQPRT 127
>SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23)
Length = 1153
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 153 PTTRATGPLRLMLRSQTPXXSSEMPPRT 236
PTT T L L+S TP ++ PRT
Sbjct: 798 PTTAVTSTLIATLQSPTPQTTTVATPRT 825
>SB_40380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/36 (36%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +1
Query: 55 KIQNGKSTRSRNRSGYHVL-LRWCLPAREGGDHRQR 159
+I+NG ++R+ R+ +H+L LR+ + AR+ R+R
Sbjct: 56 EIENGPASRNGYRTMWHILRLRYQIHARKQQVFRRR 91
>SB_13455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1387
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 167 CPGRWR*SPPSRAGRHQRKSTWY 99
C GRW S AG +++S WY
Sbjct: 536 CVGRWWKEIKSLAGVSEKESRWY 558
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,765,524
Number of Sequences: 59808
Number of extensions: 202161
Number of successful extensions: 508
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 16,821,457
effective HSP length: 67
effective length of database: 12,814,321
effective search space used: 294729383
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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