Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0906
(274 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 123 2e-29
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 123 2e-29
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 107 8e-25
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 107 8e-25
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 107 1e-24
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 96 3e-21
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 94 1e-20
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 94 1e-20
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 60 2e-10
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 60 2e-10
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 60 2e-10
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 60 2e-10
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 48 1e-06
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 42 8e-05
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 34 0.012
U50135-3|AAA93454.1| 329|Caenorhabditis elegans Squashed vulva ... 27 1.4
Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical pr... 27 1.8
AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical ... 27 2.4
Z92803-13|CAB07249.2| 331|Caenorhabditis elegans Hypothetical p... 26 3.2
U67947-2|AAB07558.1| 204|Caenorhabditis elegans Hypothetical pr... 26 3.2
U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical pr... 26 3.2
U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical pr... 26 3.2
AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical ... 26 3.2
AL021482-4|CAA16341.2| 331|Caenorhabditis elegans Hypothetical ... 26 3.2
AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein. 26 3.2
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 26 4.2
Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical pr... 25 7.3
AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical ... 25 7.3
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 25 7.3
AF399825-1|AAK77200.1| 1262|Caenorhabditis elegans separase prot... 25 9.7
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 25 9.7
AC024791-1|AAF60651.1| 1262|Caenorhabditis elegans Separase prot... 25 9.7
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 123 bits (297), Expect = 2e-29
Identities = 58/63 (92%), Positives = 59/63 (93%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVA 244
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTE LIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 245 MNP 253
MNP
Sbjct: 61 MNP 63
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 123 bits (297), Expect = 2e-29
Identities = 58/63 (92%), Positives = 59/63 (93%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVA 244
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTE LIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 245 MNP 253
MNP
Sbjct: 61 MNP 63
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 107 bits (258), Expect = 8e-25
Identities = 46/63 (73%), Positives = 56/63 (88%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVA 244
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTE L+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 245 MNP 253
NP
Sbjct: 61 RNP 63
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 107 bits (258), Expect = 8e-25
Identities = 46/63 (73%), Positives = 56/63 (88%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVA 244
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTE L+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 245 MNP 253
NP
Sbjct: 61 RNP 63
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 107 bits (257), Expect = 1e-24
Identities = 46/63 (73%), Positives = 56/63 (88%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVA 244
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTE L+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 245 MNP 253
NP
Sbjct: 61 RNP 63
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 96.3 bits (229), Expect = 3e-21
Identities = 45/59 (76%), Positives = 52/59 (88%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTEXLIGDAAKNQVAMNP 253
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ E LIGDAAKNQ+ +NP
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINP 91
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 93.9 bits (223), Expect = 1e-20
Identities = 43/59 (72%), Positives = 52/59 (88%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTEXLIGDAAKNQVAMNP 253
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ + LIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 93.9 bits (223), Expect = 1e-20
Identities = 43/59 (72%), Positives = 52/59 (88%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTEXLIGDAAKNQVAMNP 253
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ + LIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 60.5 bits (140), Expect = 2e-10
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTEXLIGDAAKNQV 241
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVI 56
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 60.5 bits (140), Expect = 2e-10
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTEXLIGDAAKNQV 241
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVI 56
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 60.5 bits (140), Expect = 2e-10
Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTEXLIGDAAKNQVAM 247
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D E L+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 248 N 250
N
Sbjct: 90 N 90
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 60.5 bits (140), Expect = 2e-10
Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTEXLIGDAAKNQVAM 247
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D E L+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 248 N 250
N
Sbjct: 90 N 90
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 47.6 bits (108), Expect = 1e-06
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Frame = +2
Query: 56 KYKMAKAPA--VGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAF-TDTEXLIG 220
KY + P GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF + LIG
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 221 DAAKNQVAMNP 253
A Q NP
Sbjct: 85 TRATEQQEHNP 95
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 41.5 bits (93), Expect = 8e-05
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVAMN 250
+G D+G +GV + G +E+I ND TP+ V+F + +G AA+ V N
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTN 59
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 34.3 bits (75), Expect = 0.012
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTEXLIGDAA 229
A+ IDLGT + +G+ + G ++I N + R TP+ V D DAA
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAA 76
>U50135-3|AAA93454.1| 329|Caenorhabditis elegans Squashed vulva
protein 7 protein.
Length = 329
Score = 27.5 bits (58), Expect = 1.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 76 CFCHFVFLISLVTCS*NNSANVRDC 2
C C FV SLV C+ +NSA C
Sbjct: 235 CICGFVLNYSLVLCTHHNSALTTTC 259
>Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical
protein T09B9.5 protein.
Length = 363
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -2
Query: 171 LLPWSLAMISTFPCWKTPTQEY-VVPRSIPTAGAFA 67
+LP A TFPC + EY +VP +P+A A
Sbjct: 287 VLPMRDAATRTFPCMLSALPEYSLVPPQVPSASTSA 322
>AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical
protein Y51A2D.8 protein.
Length = 386
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3
Query: 125 RHQRKSTWYPDRFLLR 78
RH+R+ST YPD F LR
Sbjct: 139 RHKRRSTRYPDYFDLR 154
>Z92803-13|CAB07249.2| 331|Caenorhabditis elegans Hypothetical
protein K01G5.9 protein.
Length = 331
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3
Query: 140 PSRAGRHQRKSTWYPDRFLLRVLL 69
PSR RH S W+ R LL L+
Sbjct: 87 PSRVARHLAHSNWWKQRRLLHPLI 110
>U67947-2|AAB07558.1| 204|Caenorhabditis elegans Hypothetical
protein H03E18.2 protein.
Length = 204
Score = 26.2 bits (55), Expect = 3.2
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 127 EDTNARVRGTQIDSYCGC 74
ED N+R +++SYCGC
Sbjct: 21 EDLNSRRYRQELESYCGC 38
>U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical
protein W01C8.5b protein.
Length = 323
Score = 26.2 bits (55), Expect = 3.2
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYV 190
K A G+ G+ FQ G VE I N GN +P YV
Sbjct: 98 KPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 137
>U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical
protein W01C8.5a protein.
Length = 511
Score = 26.2 bits (55), Expect = 3.2
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYV 190
K A G+ G+ FQ G VE I N GN +P YV
Sbjct: 286 KPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 325
>AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical
protein Y116A8C.13 protein.
Length = 833
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 135 GRWRSSPTTR-ATGPLRLMLRSQTPXXSSEMPPRT 236
G W R ATGP + + +Q P S MPP T
Sbjct: 84 GSWSVEIQERIATGPPQKPISAQKPEIQSPMPPMT 118
>AL021482-4|CAA16341.2| 331|Caenorhabditis elegans Hypothetical
protein K01G5.9 protein.
Length = 331
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3
Query: 140 PSRAGRHQRKSTWYPDRFLLRVLL 69
PSR RH S W+ R LL L+
Sbjct: 87 PSRVARHLAHSNWWKQRRLLHPLI 110
>AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein.
Length = 511
Score = 26.2 bits (55), Expect = 3.2
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYV 190
K A G+ G+ FQ G VE I N GN +P YV
Sbjct: 286 KPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 325
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 25.8 bits (54), Expect = 4.2
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +1
Query: 52 LKIQNGKSTRSRNRSGYHVLLRWCLPAREGGDHRQRPGQQDHSVL 186
LK NGK T+SRN+ V RE D Q+P Q D +L
Sbjct: 176 LKETNGKVTKSRNQLSERVSELEAQLKRE-ADTAQKPKQADPDLL 219
>Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.5 protein.
Length = 347
Score = 25.0 bits (52), Expect = 7.3
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = -1
Query: 181 RSGPVALVVG---DDLHLPVLEDTNARVRGTQIDSYCGCFCHFVFLIS 47
+SG V ++VG D + +P++E V I Y C+ + LIS
Sbjct: 262 KSGGVIVLVGLGADRVEIPIIESATREVDMRGIFRYVNCYPTAIELIS 309
>AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical
protein T02B11.8 protein.
Length = 94
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = -1
Query: 259 CCGVHRHLVLGGISDEXLGVCERNIRRSGPVA 164
CC H G S +G C+R S PV+
Sbjct: 58 CCPGTNHCCPPGFSCTTIGTCKRTTTLSNPVS 89
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 123 SSSTGRWRSSPTTRATGPLRLMLRSQTPXXSSEMPPRT 236
+S+ R S P+T AT P ML++ + PP++
Sbjct: 757 NSAASRPPSQPSTPATAPATPMLQASQAPQPLQAPPQS 794
>AF399825-1|AAK77200.1| 1262|Caenorhabditis elegans separase protein.
Length = 1262
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 126 KTPTQEYVVPRSIPTAGAFA 67
KTP QE+V +S+P F+
Sbjct: 1171 KTPKQEFVTSKSVPMTPIFS 1190
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +3
Query: 117 LVSSSTGRWRSSPTTRATGPLRLMLRSQTPXXSSEMPPRTRWR*TPQ 257
+++SS +P + PL + + TP +PP + TPQ
Sbjct: 795 VITSSPRTNHLTPKSHTLSPLAVKIERSTPLPPPPIPPHSPPHLTPQ 841
>AC024791-1|AAF60651.1| 1262|Caenorhabditis elegans Separase protein 1
protein.
Length = 1262
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 126 KTPTQEYVVPRSIPTAGAFA 67
KTP QE+V +S+P F+
Sbjct: 1171 KTPKQEFVTSKSVPMTPIFS 1190
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,002,739
Number of Sequences: 27780
Number of extensions: 136558
Number of successful extensions: 376
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 227290938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -