Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0906
         (274 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    21   2.1  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   2.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   2.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   2.8  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    20   6.4  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    19   8.4  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    19   8.4  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    19   8.4  

>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
          finger domain-Z3 isoform protein.
          Length = 92

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 68 PFCIFNQSCYLFLKQ 24
          P+C  N SCY  LK+
Sbjct: 9  PYCRRNFSCYYSLKR 23


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 104 WYPDRFLLRVLLPFC 60
           W P  FL+ V++PFC
Sbjct: 340 WLPF-FLMYVIVPFC 353


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 104 WYPDRFLLRVLLPFC 60
           W P  FL+ V++PFC
Sbjct: 340 WLPF-FLMYVIVPFC 353


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 104 WYPDRFLLRVLLPFC 60
           W P  FL+ V++PFC
Sbjct: 340 WLPF-FLMYVIVPFC 353


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 6.4
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -3

Query: 173 SCCPGRWR 150
           +CCPGR R
Sbjct: 407 ACCPGRVR 414


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 249 FIATWFLAAS 220
           FIA WF+A +
Sbjct: 8   FIAAWFIACT 17


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 249 FIATWFLAAS 220
           FIA WF+A +
Sbjct: 8   FIAAWFIACT 17


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 249 FIATWFLAAS 220
           FIA WF+A +
Sbjct: 8   FIAAWFIACT 17


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,226
Number of Sequences: 438
Number of extensions: 1927
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5263398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)