Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0906
(274 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70... 120 2e-28
At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1 (HS... 118 7e-28
At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2 (HS... 118 7e-28
At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3 (HS... 118 7e-28
At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein, puta... 118 7e-28
At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70... 108 6e-25
At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)... 100 2e-22
At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)... 100 2e-22
At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)... 100 2e-22
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 99 4e-22
At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)... 65 7e-12
At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)... 63 3e-11
At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70... 63 3e-11
At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial, p... 61 1e-10
At1g79930.1 68414.m09340 heat shock protein, putative contains P... 48 9e-07
At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70... 48 9e-07
At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70... 48 9e-07
At1g11660.1 68414.m01339 heat shock protein, putative strong sim... 43 3e-05
At2g32120.2 68415.m03926 heat shock protein 70 family protein / ... 34 0.012
At2g32120.1 68415.m03925 heat shock protein 70 family protein / ... 34 0.012
At4g16660.1 68417.m02517 heat shock protein 70, putative / HSP70... 34 0.015
At4g24910.1 68417.m03566 hypothetical protein contains Pfam prof... 29 0.33
At2g27350.5 68415.m03295 OTU-like cysteine protease family prote... 29 0.58
At2g27350.4 68415.m03294 OTU-like cysteine protease family prote... 29 0.58
At2g27350.3 68415.m03293 OTU-like cysteine protease family prote... 29 0.58
At2g27350.2 68415.m03292 OTU-like cysteine protease family prote... 29 0.58
At2g27350.1 68415.m03291 OTU-like cysteine protease family prote... 29 0.58
At4g27630.2 68417.m03972 expressed protein 28 0.77
At3g25790.1 68416.m03210 myb family transcription factor contain... 28 1.0
At1g68330.1 68414.m07805 expressed protein 27 1.3
At3g05150.1 68416.m00559 sugar transporter family protein simila... 27 1.8
At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive eff... 27 1.8
At4g06534.1 68417.m00946 hypothetical protein 26 3.1
At3g58790.1 68416.m06552 glycosyl transferase family 8 protein c... 26 3.1
At1g65110.1 68414.m07381 ubiquitin carboxyl-terminal hydrolase-r... 26 3.1
At5g22150.1 68418.m02579 hypothetical protein 26 4.1
At2g16270.1 68415.m01863 expressed protein and genefinder; expr... 26 4.1
At5g52610.1 68418.m06532 F-box family protein contains F-box dom... 25 5.4
At4g13730.2 68417.m02131 RabGAP/TBC domain-containing protein lo... 25 5.4
At4g13730.1 68417.m02132 RabGAP/TBC domain-containing protein lo... 25 5.4
At3g20550.1 68416.m02601 forkhead-associated domain-containing p... 25 7.2
At2g20540.1 68415.m02399 pentatricopeptide (PPR) repeat-containi... 25 7.2
At1g65200.1 68414.m07392 ubiquitin carboxyl-terminal hydrolase-r... 25 7.2
At1g05750.1 68414.m00599 pentatricopeptide (PPR) repeat-containi... 25 7.2
At5g61950.1 68418.m07776 ubiquitin carboxyl-terminal hydrolase-r... 25 9.5
At5g50820.1 68418.m06296 no apical meristem (NAM) family protein... 25 9.5
At3g57430.1 68416.m06394 pentatricopeptide (PPR) repeat-containi... 25 9.5
At1g60560.2 68414.m06818 SWIM zinc finger family protein contain... 25 9.5
At1g60560.1 68414.m06817 SWIM zinc finger family protein contain... 25 9.5
>At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein
GI:425194 [Spinacia oleracea]
Length = 650
Score = 120 bits (288), Expect = 2e-28
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVAMN 250
+ PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+E LIGDAAKNQVAMN
Sbjct: 6 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMN 65
Query: 251 PT 256
PT
Sbjct: 66 PT 67
>At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1
(HSC70-1) (HSP70-1) identical to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}
Length = 651
Score = 118 bits (283), Expect = 7e-28
Identities = 53/61 (86%), Positives = 58/61 (95%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVAMN 250
+ PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+E LIGDAAKNQVAMN
Sbjct: 6 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMN 65
Query: 251 P 253
P
Sbjct: 66 P 66
>At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2
(HSC70-2) (HSP70-2) identical to SP|P22954 Heat shock
cognate 70 kDa protein 2 (Hsc70.2) {Arabidopsis
thaliana}
Length = 653
Score = 118 bits (283), Expect = 7e-28
Identities = 53/61 (86%), Positives = 58/61 (95%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVAMN 250
+ PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+E LIGDAAKNQVAMN
Sbjct: 6 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMN 65
Query: 251 P 253
P
Sbjct: 66 P 66
>At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3
(HSC70-3) (HSP70-3) identical to SP|O65719 Heat shock
cognate 70 kDa protein 3 (Hsc70.3) {Arabidopsis
thaliana}
Length = 649
Score = 118 bits (283), Expect = 7e-28
Identities = 53/61 (86%), Positives = 58/61 (95%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVAMN 250
+ PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+E LIGDAAKNQVAMN
Sbjct: 6 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMN 65
Query: 251 P 253
P
Sbjct: 66 P 66
>At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein,
putative / HSC70, putative / HSP70, putative strong
similarity to heat shock cognate 70 kd protein 1
SP:P22953 [Arabidopsis thaliana (Mouse-ear cress)]
Length = 617
Score = 118 bits (283), Expect = 7e-28
Identities = 53/61 (86%), Positives = 58/61 (95%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVAMN 250
+ PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+E LIGDAAKNQVAMN
Sbjct: 6 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMN 65
Query: 251 P 253
P
Sbjct: 66 P 66
>At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70,
putative similar to heat shock protein hsp70 GI:1771478
from [Pisum sativum]
Length = 646
Score = 108 bits (259), Expect = 6e-25
Identities = 49/58 (84%), Positives = 54/58 (93%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVAMNP 253
A+GIDLGTTYSCVGV+ + +VEII NDQGNRTTPSYVAFTDTE LIGDAAKNQVA+NP
Sbjct: 8 AIGIDLGTTYSCVGVWMNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVALNP 65
>At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 613
Score = 100 bits (239), Expect = 2e-22
Identities = 44/57 (77%), Positives = 52/57 (91%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVAMNP 253
+GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+V FTD+E LIG+AAKNQ A+NP
Sbjct: 38 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNP 94
>At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 668
Score = 100 bits (239), Expect = 2e-22
Identities = 44/57 (77%), Positives = 52/57 (91%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVAMNP 253
+GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+V FTD+E LIG+AAKNQ A+NP
Sbjct: 38 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNP 94
>At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)
SWISS-PROT:Q9LKR3 PMID:8888624
Length = 669
Score = 100 bits (239), Expect = 2e-22
Identities = 44/57 (77%), Positives = 52/57 (91%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVAMNP 253
+GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+V FTD+E LIG+AAKNQ A+NP
Sbjct: 38 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNP 94
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 99.1 bits (236), Expect = 4e-22
Identities = 45/57 (78%), Positives = 50/57 (87%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVAMNP 253
+GIDLGTTYSCVGV+ + VEIIANDQGNR TPS+VAFTDTE LIG+AAKNQ A NP
Sbjct: 53 IGIDLGTTYSCVGVYHNKHVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAAKNP 109
>At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746590
Length = 682
Score = 64.9 bits (151), Expect = 7e-12
Identities = 35/70 (50%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 62 KMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTEXLIGDAAKNQ 238
K A +GIDLGTT SCV V + ++I N +G RTTPS VAF T E L+G AK Q
Sbjct: 53 KPAGNDVIGIDLGTTNSCVAVMEGKNPKVIENAEGARTTPSVVAFNTKGELLVGTPAKRQ 112
Query: 239 VAMNPTTQYS 268
NPT S
Sbjct: 113 AVTNPTNTVS 122
>At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746592
Length = 718
Score = 62.9 bits (146), Expect = 3e-11
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +2
Query: 62 KMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-EXLIGDAAKNQ 238
++ VGIDLGTT S V + GK I+ N +G RTTPS VA+T + + L+G AK Q
Sbjct: 74 RVVNEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKSKDRLVGQIAKRQ 133
Query: 239 VAMNPTTQY 265
+NP +
Sbjct: 134 AVVNPENTF 142
>At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein 70
[Arabidopsis thaliana] GI:6746592; similar to heat shock
70 protein - Spinacia oleracea,PID:g2654208
Length = 718
Score = 62.9 bits (146), Expect = 3e-11
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +2
Query: 62 KMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-EXLIGDAAKNQ 238
++ VGIDLGTT S V + GK I+ N +G RTTPS VA+T + + L+G AK Q
Sbjct: 74 RVVNEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKSGDRLVGQIAKRQ 133
Query: 239 VAMNPTTQY 265
+NP +
Sbjct: 134 AVVNPENTF 142
>At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial,
putative / HSP70, mitochondrial, putative strong
similarity to SP|Q01899 Heat shock 70 kDa protein,
mitochondrial precursor {Phaseolus vulgaris}
Length = 682
Score = 60.9 bits (141), Expect = 1e-10
Identities = 30/59 (50%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-EXLIGDAAKNQVAMNPT 256
+GIDLGTT SCV V + +I N +G+RTTPS VA E L+G AK Q NPT
Sbjct: 55 IGIDLGTTNSCVSVMEGKTARVIENAEGSRTTPSVVAMNQKGELLVGTPAKRQAVTNPT 113
>At1g79930.1 68414.m09340 heat shock protein, putative contains Pfam
profile: PF00012 Heat shock hsp70 proteins; similar to
heat-shock proteins GB:CAA94389, GB:AAD55461
[Arabidopsis thaliana]
Length = 831
Score = 48.0 bits (109), Expect = 9e-07
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVAMNPTTQ 262
VG D G V V + ++++ ND+ NR TP+ V F D + IG A MNP
Sbjct: 4 VGFDFGNENCLVAVARQRGIDVVLNDESNRETPAIVCFGDKQRFIGTAGAASTMMNPKNS 63
Query: 263 YS 268
S
Sbjct: 64 IS 65
>At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 48.0 bits (109), Expect = 9e-07
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVAMNPTTQ 262
VG D G V V + ++++ ND+ NR TP+ V F D + IG A MNP
Sbjct: 4 VGFDFGNENCLVAVARQRGIDVVLNDESNRETPAIVCFGDKQRFIGTAGAASTMMNPKNS 63
Query: 263 YS 268
S
Sbjct: 64 IS 65
>At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 48.0 bits (109), Expect = 9e-07
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVAMNPTTQ 262
VG D G V V + ++++ ND+ NR TP+ V F D + IG A MNP
Sbjct: 4 VGFDFGNENCLVAVARQRGIDVVLNDESNRETPAIVCFGDKQRFIGTAGAASTMMNPKNS 63
Query: 263 YS 268
S
Sbjct: 64 IS 65
>At1g11660.1 68414.m01339 heat shock protein, putative strong
similarity to gb|Z70314 heat-shock protein from
Arabidopsis thaliana and is a member of the PF|00012
Hsp70 protein family
Length = 773
Score = 42.7 bits (96), Expect = 3e-05
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEXLIGDAAKNQVAMNPTTQ 262
VG D+G + V + ++++ ND+ NR P+ V+F + + +G AA M+P +
Sbjct: 4 VGFDVGNENCVIAVAKQRGIDVLLNDESNRENPAMVSFGEKQRFMGAAAAASATMHPKST 63
Query: 263 YS 268
S
Sbjct: 64 IS 65
>At2g32120.2 68415.m03926 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 34.3 bits (75), Expect = 0.012
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD 202
A+GID+GT+ + V+ +V I+ N + + S+V F D
Sbjct: 30 ALGIDIGTSQCSIAVWNGSQVHILRNTRNQKLIKSFVTFKD 70
>At2g32120.1 68415.m03925 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 34.3 bits (75), Expect = 0.012
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD 202
A+GID+GT+ + V+ +V I+ N + + S+V F D
Sbjct: 30 ALGIDIGTSQCSIAVWNGSQVHILRNTRNQKLIKSFVTFKD 70
>At4g16660.1 68417.m02517 heat shock protein 70, putative / HSP70,
putative
Length = 867
Score = 33.9 bits (74), Expect = 0.015
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +2
Query: 68 AKAPAVGIDLGTTYSCVGV--FQHGK--VEIIANDQGNRTTPSYVAFTDTEXLIGDAAKN 235
+++ + +DLG+ + V V + G+ + + N+ R +P+ VAF + L+G+ A
Sbjct: 22 SESAVLSVDLGSEWVKVAVVNLKRGQSPISVAINEMSKRKSPALVAFQSGDRLLGEEAAG 81
Query: 236 QVAMNPTTQYS 268
A P YS
Sbjct: 82 ITARYPNKVYS 92
>At4g24910.1 68417.m03566 hypothetical protein contains Pfam profile
PF04669: Protein of unknown function (DUF579)
Length = 315
Score = 29.5 bits (63), Expect = 0.33
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -3
Query: 188 HKTEWSCCPGRWR*SPPSRAG--RHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQL 21
H++ S R SPPS +HQR ST +F +R L+P IF S L+ L
Sbjct: 6 HQSSLSILNPLLRFSPPSSPDNPKHQRLSTIKMPKFTVRKLIPLLIFVLSSLSVLRLL 63
>At2g27350.5 68415.m03295 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 388
Score = 28.7 bits (61), Expect = 0.58
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +3
Query: 78 PQ*ESIWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPXXSSEMPPRT 236
P+ S P + V S G R PT RA GP L+ +P S PR+
Sbjct: 122 PKPSSTVNPGSNRSVLGSFGALRIGPTRRAAGPRSLVSSRSSPTGSHPSSPRS 174
>At2g27350.4 68415.m03294 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 388
Score = 28.7 bits (61), Expect = 0.58
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +3
Query: 78 PQ*ESIWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPXXSSEMPPRT 236
P+ S P + V S G R PT RA GP L+ +P S PR+
Sbjct: 122 PKPSSTVNPGSNRSVLGSFGALRIGPTRRAAGPRSLVSSRSSPTGSHPSSPRS 174
>At2g27350.3 68415.m03293 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 506
Score = 28.7 bits (61), Expect = 0.58
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +3
Query: 78 PQ*ESIWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPXXSSEMPPRT 236
P+ S P + V S G R PT RA GP L+ +P S PR+
Sbjct: 122 PKPSSTVNPGSNRSVLGSFGALRIGPTRRAAGPRSLVSSRSSPTGSHPSSPRS 174
>At2g27350.2 68415.m03292 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 505
Score = 28.7 bits (61), Expect = 0.58
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +3
Query: 78 PQ*ESIWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPXXSSEMPPRT 236
P+ S P + V S G R PT RA GP L+ +P S PR+
Sbjct: 122 PKPSSTVNPGSNRSVLGSFGALRIGPTRRAAGPRSLVSSRSSPTGSHPSSPRS 174
>At2g27350.1 68415.m03291 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 505
Score = 28.7 bits (61), Expect = 0.58
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +3
Query: 78 PQ*ESIWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPXXSSEMPPRT 236
P+ S P + V S G R PT RA GP L+ +P S PR+
Sbjct: 122 PKPSSTVNPGSNRSVLGSFGALRIGPTRRAAGPRSLVSSRSSPTGSHPSSPRS 174
>At4g27630.2 68417.m03972 expressed protein
Length = 467
Score = 28.3 bits (60), Expect = 0.77
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -3
Query: 125 RHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKR 12
R R W D F L VLL F + CYL L+ R
Sbjct: 71 REARMVNWKVDLFCLIVLLVFMLPYYHCYLMLRNTGVR 108
>At3g25790.1 68416.m03210 myb family transcription factor contains
Pfam domain, PF00249: Myb-like DNA-binding domain
Length = 357
Score = 27.9 bits (59), Expect = 1.0
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +3
Query: 36 QVTRLIKNTKWQKHPQ*ESIWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPXXS 215
Q T +N++ Q IWVP+T +++ S TT GP+ L S+ P S
Sbjct: 257 QTTPNNRNSQTQHFVVVGGIWVPQTNHSTANAVNAVASGETTGIYGPMVSSLPSEWPRHS 316
Query: 216 S 218
+
Sbjct: 317 N 317
>At1g68330.1 68414.m07805 expressed protein
Length = 268
Score = 27.5 bits (58), Expect = 1.3
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +3
Query: 21 ELF*EQVTRLIKNTKWQKHPQ*ESIWVPRTLALVSSSTGRWRSSPTTRA-TGPLRLMLRS 197
ELF E ++ K + PQ + VPR+ +L SSS+ SS ++RA +RL
Sbjct: 64 ELFSEGKILPVQIKKEESLPQTVTFRVPRSASLSSSSSSSSSSSSSSRAPEKKMRLKELL 123
Query: 198 QTPXXSSEMPPR 233
P E PR
Sbjct: 124 LNPESDFEDKPR 135
>At3g05150.1 68416.m00559 sugar transporter family protein similar
to sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 470
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 273 GIEYCVVGFIATWFLAASP 217
G+ CVV F TWF+ SP
Sbjct: 193 GVAPCVVLFFGTWFIPESP 211
>At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1939
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -3
Query: 146 SPPSRAGR-HQRKSTWYPDRFLLRVLLP 66
S PS R +QRK W+ D F L + LP
Sbjct: 28 SDPSAVRRLNQRKEQWFTDAFTLLISLP 55
>At4g06534.1 68417.m00946 hypothetical protein
Length = 405
Score = 26.2 bits (55), Expect = 3.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 64 NGKSTRSRNRSGYHVLLRWCLPAREGGD 147
N ST SR+ + YH L W + ++G +
Sbjct: 375 NQPSTSSRSPNSYHTSLLWLIKDKQGNN 402
>At3g58790.1 68416.m06552 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8; general stress protein gspA, Bacillus
subtilis, PIR:S16423
Length = 540
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 163 LVVGDDLHLPVLEDTNARVRGTQIDSYCGCFC 68
+VV DL D N +V G +DS+CG C
Sbjct: 360 VVVQSDLSSLWETDLNGKVVGAVVDSWCGDNC 391
>At1g65110.1 68414.m07381 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1094
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 156 LAMISTFPCWKTPTQEYVVPR 94
+A++ F CWK+P +E +V R
Sbjct: 861 VAILEFFHCWKSPERESLVTR 881
>At5g22150.1 68418.m02579 hypothetical protein
Length = 330
Score = 25.8 bits (54), Expect = 4.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 204 PXXSSEMPPRTRW 242
P SS+MPPR RW
Sbjct: 15 PYASSDMPPRRRW 27
>At2g16270.1 68415.m01863 expressed protein and genefinder;
expression supported by MPSS
Length = 759
Score = 25.8 bits (54), Expect = 4.1
Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = -1
Query: 241 HLVLGGISDEXLGVCERNIRRS-GPVALVVGDDLHLPVLEDTNARVRGTQI 92
HL +G +D G E G +A DDLHL V A T++
Sbjct: 552 HLEVGSYNDLAKGDAESGSEEGFGEIAAETSDDLHLKVRSSNKAYNDSTKL 602
>At5g52610.1 68418.m06532 F-box family protein contains F-box domain
Pfam:PF00646
Length = 351
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Frame = -1
Query: 91 DSYCGCFCHFVF-----LISLVTCS*NNSANVRDC 2
D + C HF L++ TCS NNS++ DC
Sbjct: 59 DIFTSCRWHFFSSSQPSLVTKATCSANNSSHTPDC 93
>At4g13730.2 68417.m02131 RabGAP/TBC domain-containing protein low
similarity to SP|Q08484 GTPase-activating protein GYP1
{Saccharomyces cerevisiae}; contains Pfam profile
PF00566: TBC domain
Length = 408
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 266 NIVLWGSSPPGSWRHLR 216
N LW SSPP RHLR
Sbjct: 11 NSSLWSSSPPIDDRHLR 27
>At4g13730.1 68417.m02132 RabGAP/TBC domain-containing protein low
similarity to SP|Q08484 GTPase-activating protein GYP1
{Saccharomyces cerevisiae}; contains Pfam profile
PF00566: TBC domain
Length = 449
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 266 NIVLWGSSPPGSWRHLR 216
N LW SSPP RHLR
Sbjct: 11 NSSLWSSSPPIDDRHLR 27
>At3g20550.1 68416.m02601 forkhead-associated domain-containing
protein / FHA domain-containing protein weak similarity
to SP|Q28147 Nuclear inhibitor of protein phosphatase-1
(NIPP-1) (Protein phosphatase 1, regulatory inhibitor
subunit 8) {Bos taurus}; contains Pfam profile PF00498:
FHA domain
Length = 314
Score = 25.0 bits (52), Expect = 7.2
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 68 PFCIFNQSCYLF 33
P C+ QSCYLF
Sbjct: 210 PLCLHRQSCYLF 221
>At2g20540.1 68415.m02399 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 534
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 116 RKSTWYPDRFLLRVLLPFCIFNQSCYL 36
RKS PDRF + C SCYL
Sbjct: 101 RKSFELPDRFTFPFMFKSCASLGSCYL 127
>At1g65200.1 68414.m07392 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1101
Score = 25.0 bits (52), Expect = 7.2
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -2
Query: 156 LAMISTFPCWKTPTQEYVVPR 94
+A++ + CWK+P +E +V R
Sbjct: 887 IAILEFWQCWKSPQRESLVTR 907
>At1g05750.1 68414.m00599 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 439
Score = 25.0 bits (52), Expect = 7.2
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = -1
Query: 244 RHLVLGGISDEXLGVCERNIRRSGPVALVVGDDLHLPVLED---TNARVRGTQIDSYCGC 74
R + + G+ + + + + AL G +H VL N RV + ID YC C
Sbjct: 134 REMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRC 193
Query: 73 FC 68
C
Sbjct: 194 GC 195
>At5g61950.1 68418.m07776 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1132
Score = 24.6 bits (51), Expect = 9.5
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -2
Query: 156 LAMISTFPCWKTPTQEYVVPR 94
+A+++ + CWK P +E +V R
Sbjct: 916 VAVLNLWRCWKNPERESLVTR 936
>At5g50820.1 68418.m06296 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
similar to unknown protein (pir||T07182)
Length = 184
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 96 WVPRTLALVSSSTGRWRSSPTTR 164
W+ L+SS RW SSP R
Sbjct: 122 WIMYEFRLLSSRATRWSSSPLPR 144
>At3g57430.1 68416.m06394 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 890
Score = 24.6 bits (51), Expect = 9.5
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Frame = -1
Query: 244 RHLVLGGISDEXLGVCERNIRRSGPVALVVGDDLHLPVLE----DTNARVRGTQIDSYCG 77
R +VL G+ + + S L G +LH L+ D N+ V +D YC
Sbjct: 291 REMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCN 350
Query: 76 C 74
C
Sbjct: 351 C 351
>At1g60560.2 68414.m06818 SWIM zinc finger family protein contains
Pfam domain PF04434: SWIM zinc finger
Length = 500
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 118 NARVRGTQIDSYCGCFCHFV 59
N R R + S GC CHFV
Sbjct: 115 NTRNRAARPQSMRGCTCHFV 134
>At1g60560.1 68414.m06817 SWIM zinc finger family protein contains
Pfam domain PF04434: SWIM zinc finger
Length = 703
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 118 NARVRGTQIDSYCGCFCHFV 59
N R R + S GC CHFV
Sbjct: 115 NTRNRAARPQSMRGCTCHFV 134
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,663,319
Number of Sequences: 28952
Number of extensions: 128180
Number of successful extensions: 396
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 392
length of database: 12,070,560
effective HSP length: 68
effective length of database: 10,101,824
effective search space used: 222240128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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