Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0905
         (776 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y12322-1|CAA72991.1| 1191|Drosophila melanogaster u-shaped protein.    29   9.4  
BT015278-1|AAT94507.1| 1191|Drosophila melanogaster LD12631p pro...    29   9.4  
AE014134-116|AAF51488.2| 1191|Drosophila melanogaster CG2762-PA ...    29   9.4  

>Y12322-1|CAA72991.1| 1191|Drosophila melanogaster u-shaped protein.
          Length = 1191

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
 Frame = -2

Query: 520 QLVPQFGQHATPDDQPPRGTPTSKHAFCGVIRAARVIFNGLIVVSRLL---IKHICFFSG 350
           QL+P+  Q ATP  + P  +P    + C   +  +V  N L+     L    K +     
Sbjct: 121 QLIPKLEQPATPPSE-PEASPCPSPSPCPTPKYPKVRLNALLASDPALKPDAKELTLPDS 179

Query: 349 GQLSDPPTLFPEATA 305
             L+ PP + P+  A
Sbjct: 180 RLLAPPPLVKPDTQA 194


>BT015278-1|AAT94507.1| 1191|Drosophila melanogaster LD12631p
           protein.
          Length = 1191

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
 Frame = -2

Query: 520 QLVPQFGQHATPDDQPPRGTPTSKHAFCGVIRAARVIFNGLIVVSRLL---IKHICFFSG 350
           QL+P+  Q ATP  + P  +P    + C   +  +V  N L+     L    K +     
Sbjct: 121 QLIPKLEQPATPPSE-PEASPCPSPSPCPTPKYPKVRLNALLASDPALKPDAKELTLPDS 179

Query: 349 GQLSDPPTLFPEATA 305
             L+ PP + P+  A
Sbjct: 180 RLLAPPPLVKPDTQA 194


>AE014134-116|AAF51488.2| 1191|Drosophila melanogaster CG2762-PA
           protein.
          Length = 1191

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
 Frame = -2

Query: 520 QLVPQFGQHATPDDQPPRGTPTSKHAFCGVIRAARVIFNGLIVVSRLL---IKHICFFSG 350
           QL+P+  Q ATP  + P  +P    + C   +  +V  N L+     L    K +     
Sbjct: 121 QLIPKLEQPATPPSE-PEASPCPSPSPCPTPKYPKVRLNALLASDPALKPDAKELTLPDS 179

Query: 349 GQLSDPPTLFPEATA 305
             L+ PP + P+  A
Sbjct: 180 RLLAPPPLVKPDTQA 194


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,760,155
Number of Sequences: 53049
Number of extensions: 645951
Number of successful extensions: 1786
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1786
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)