Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0903
         (768 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   2.6  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   4.5  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   4.5  
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         24   5.9  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 16/57 (28%), Positives = 23/57 (40%)
 Frame = -3

Query: 643  GPPTMPPTKAANGIRPPTHVISSFVMSKVIFIVSTAGDVYPDENPHSLNRQKLQTLQ 473
            GP T PP    NG+  PTH  S   +  +   + T    Y  +      +Q+ Q  Q
Sbjct: 1267 GPHTPPPPNTPNGM--PTHQHSQIQLQPIQQPLQTLQHQYQQQLQQQQQQQQQQQQQ 1321


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -1

Query: 135 LVVDAESVGFEGTRAYLGPRVRYNRSSSP 49
           + V    V F  T  YLG R+ YN S  P
Sbjct: 732 ITVGGTEVPFSRTLKYLGVRLHYNLSWVP 760



 Score = 23.4 bits (48), Expect = 7.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 92   RIWDHECGITALHPLVRDGFVRFHP 18
            R WD EC I A   ++ +   R  P
Sbjct: 1019 RCWDDECAILAAQAMLEEPANRLDP 1043


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 105 RNQRSQRQQPALPSQLHVDP 164
           + QRSQ+++PA P  + V P
Sbjct: 484 QQQRSQQRKPAKPELIEVSP 503


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +3

Query: 525 YTSPAVLTMNITLDITKEEI--TWVGGLMPLAALVGGIVGGPLIEYLGR 665
           Y     L  ++ + + K+ I  T   G +PL A+VGG      I Y+GR
Sbjct: 57  YGGQETLVEHVEVLVHKQLIWDTASAGQVPLGAVVGGHTSDGEILYVGR 105


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 822,410
Number of Sequences: 2352
Number of extensions: 16883
Number of successful extensions: 76
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)