Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0903
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical ... 52 6e-07
Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 31 1.2
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 31 1.2
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 31 1.2
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 31 1.2
Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical p... 28 8.4
>AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical
protein Y51A2D.4 protein.
Length = 606
Score = 51.6 bits (118), Expect = 6e-07
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +3
Query: 510 GFSSGYTSPAVLTMNITLDITKEEITW---VGGLMPLAALVGGIVGGPLIEYLGRXKTIM 680
G+ + S A+L M + + W + + P A VG ++ G +Y+GR K I+
Sbjct: 40 GYDTSVVSAAMLYMPDAPGLKPMDTVWQEVLVSISPGMAAVGSLMSGTSSDYIGRRKVIL 99
Query: 681 GTAVPFTIGWMLIANAINVVMVFAGRV 761
G + FTIG ++ A ++N +M+ GRV
Sbjct: 100 GASAIFTIGALVCAASVNKIMLLVGRV 126
>Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical
protein M01F1.5 protein.
Length = 604
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +3
Query: 510 GFSSGYTSPAVLTMNITLDITKEEITW---VGGLMPLAALVGGIVGGPLIEYLGRXKTIM 680
G+ +G S A+L + I + W + + P A +G + GP ++LGR K I+
Sbjct: 43 GYDTGIVSAAMLYVPNASGIKPLDSVWQEIIVSITPGVAAIGSLCSGPGSDFLGRKKIII 102
Query: 681 GTAVPFTIGWMLIANAINVVMVFAGRV 761
G +V FTIG ++ A A +++ GR+
Sbjct: 103 GASVTFTIGAIICAAAWTKIILLIGRI 129
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 563 GHNKGRNNMGWGSYAVSSFGRRHCWRTFDRIP 658
G N G ++ WG+Y+ + G+RH R +R P
Sbjct: 3543 GTNSGYGHILWGTYSTLAPGQRHILRLLNRTP 3574
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 563 GHNKGRNNMGWGSYAVSSFGRRHCWRTFDRIP 658
G N G ++ WG+Y+ + G+RH R +R P
Sbjct: 3543 GTNSGYGHILWGTYSTLAPGQRHILRLLNRTP 3574
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 563 GHNKGRNNMGWGSYAVSSFGRRHCWRTFDRIP 658
G N G ++ WG+Y+ + G+RH R +R P
Sbjct: 3543 GTNSGYGHILWGTYSTLAPGQRHILRLLNRTP 3574
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 563 GHNKGRNNMGWGSYAVSSFGRRHCWRTFDRIP 658
G N G ++ WG+Y+ + G+RH R +R P
Sbjct: 3543 GTNSGYGHILWGTYSTLAPGQRHILRLLNRTP 3574
>Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical
protein K09E9.1 protein.
Length = 508
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 591 VGGLMPLAALVGGIVGGPLIEYLGRXKTIMGTAVPFTIGWMLI 719
+ L+ AL+G V G L + LGR +G + TIG +L+
Sbjct: 118 MSSLLMWGALIGSFVCGFLSDRLGRKPVYLGCLLMITIGHILL 160
>Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 564 DITKEEITWVGGLMPLAALVGGIVGGPLIEYLGRXKTIM 680
++ E W M LA + G I GG +IE +GR K ++
Sbjct: 301 NVESEIAEWSTTAMGLAYVSGTITGGIVIEKVGRRKLLL 339
>Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 564 DITKEEITWVGGLMPLAALVGGIVGGPLIEYLGRXKTIM 680
++ E W M LA + G I GG +IE +GR K ++
Sbjct: 301 NVESEIAEWSTTAMGLAYVSGTITGGIVIEKVGRRKLLL 339
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,740,706
Number of Sequences: 27780
Number of extensions: 368999
Number of successful extensions: 1173
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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