Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0903
         (768 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    24   1.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   2.4  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           23   2.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   2.4  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   4.1  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   5.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   5.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   5.5  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   7.2  
M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee preprosec...    21   9.5  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   9.5  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   9.5  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    21   9.5  
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      21   9.5  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 17/70 (24%), Positives = 31/70 (44%)
 Frame = +3

Query: 417 GWNTVQIYNSETVSMDAASCSVCSFCRFNECGFSSGYTSPAVLTMNITLDITKEEITWVG 596
           G +++  YN + +    ASC  C+    N C  S+ YT+  V  +  T+ +       V 
Sbjct: 147 GVHSLSDYNDKPIP---ASC--CNSPENNTCSISNSYTNGCVEALKDTVKLAGTVFGSVA 201

Query: 597 GLMPLAALVG 626
             + +  L+G
Sbjct: 202 IAIAIVELIG 211


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +3

Query: 552 NITLDITKEEITWVGGLMPLAALVGGIVGGPLIEY 656
           ++ L    E I W GG      L+G   GG  + Y
Sbjct: 183 SMALRWVSENIEWFGGNPKRITLIGLSAGGASVHY 217


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +3

Query: 552 NITLDITKEEITWVGGLMPLAALVGGIVGGPLIEY 656
           ++ L    E I W GG      L+G   GG  + Y
Sbjct: 54  SMALRWVSENIEWFGGNPKRITLIGLSAGGASVHY 88


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +3

Query: 552 NITLDITKEEITWVGGLMPLAALVGGIVGGPLIEY 656
           ++ L    E I W GG      L+G   GG  + Y
Sbjct: 183 SMALRWVSENIEWFGGNPKRITLIGLSAGGASVHY 217


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 545 NNEYNFGHNKGRNN 586
           NN YN  HN+ R++
Sbjct: 422 NNHYNHNHNQARHS 435


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 406 YDNEDGTPYKSTTQKLFLWTQLLAAFAVS 492
           Y+N++G+    T +    WT +  AF +S
Sbjct: 197 YENKNGSVILDTARCSMKWTLIEHAFEIS 225


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +3

Query: 495 RFNECGFSSGYTSPAVLTMNITLDITKEEITWVGGL--MPLAA 617
           R +E   ++GY    V     +LDI  EE+ W  G   +P++A
Sbjct: 406 RKSEHNGTNGYQYQVVGKWFNSLDIRTEELIWARGTKDIPISA 448


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +3

Query: 495 RFNECGFSSGYTSPAVLTMNITLDITKEEITWVGGL--MPLAA 617
           R +E   ++GY    V     +LDI  EE+ W  G   +P++A
Sbjct: 496 RKSEHNGTNGYQYQVVGKWFNSLDIRTEELIWARGTKDIPISA 538


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 207 CSGIGS*LVGTRVPWDPHEV 148
           CSG+G   +  R+P D  EV
Sbjct: 780 CSGLGVEEIPRRIPMDATEV 799


>M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee
           preprosecapin mRNA, complete cds. ).
          Length = 77

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 661 PRYSIKGPPTMPP 623
           PRY I  PP  PP
Sbjct: 51  PRYIIDVPPRCPP 63


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 80  HECGITALHPLVRDGFVRFHPGIK 9
           H CG     P +  G +R H G K
Sbjct: 46  HLCGKAFSRPWLLQGHIRTHTGEK 69


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = +2

Query: 545 NNEYNFGHNKGRNNMGWGSYAVS 613
           NN+YN+ +N     + + +Y ++
Sbjct: 101 NNKYNYNNNNYNKKLYYKNYIIN 123


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 13/62 (20%), Positives = 26/62 (41%)
 Frame = +1

Query: 271 QQLRQISLGNEFKYKMEMEIKDENLRNSVPFVRQLSTDSVKTKTEYDNEDGTPYKSTTQK 450
           ++  Q S  NE +Y+   E   E  R+     R   +  + + +     +   YK+  +K
Sbjct: 276 REREQKSYKNEREYRKYRETSKERFRDRRERERSKESKIISSLSNKTIHNNNNYKNYNKK 335

Query: 451 LF 456
           L+
Sbjct: 336 LY 337


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 661 PRYSIKGPPTMPP 623
           PRY I  PP  PP
Sbjct: 51  PRYIIDVPPRCPP 63


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,016
Number of Sequences: 438
Number of extensions: 4760
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)