Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0898
         (875 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...   116   3e-26
AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical ...    33   0.27 
U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical pr...    33   0.35 
Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical pr...    32   0.47 
Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AF038612-1|AAB92043.1|  348|Caenorhabditis elegans Hypothetical ...    29   4.4  
Z81066-5|CAB02969.1|  777|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z68134-4|CAA92224.1|  567|Caenorhabditis elegans Hypothetical pr...    29   5.8  
AF016416-8|AAB65271.1|  388|Caenorhabditis elegans Hypothetical ...    28   7.6  

>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score =  116 bits (278), Expect = 3e-26
 Identities = 50/71 (70%), Positives = 59/71 (83%)
 Frame = +2

Query: 509 KYAMVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNT 688
           K+ +VI+S ILERDE+  D++WNTAVVIS TG VIG+ RKNHIPRVGDFNES YYME   
Sbjct: 159 KHDIVIISPILERDEEKDDVIWNTAVVISHTGRVIGRSRKNHIPRVGDFNESTYYMESTL 218

Query: 689 GHPVFATRYGQ 721
           GHPVF T+YG+
Sbjct: 219 GHPVFETKYGR 229



 Score = 96.7 bits (230), Expect = 2e-20
 Identities = 45/88 (51%), Positives = 56/88 (63%)
 Frame = +3

Query: 246 PENVKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAFC 425
           P  V+V  +Q+ I  PT   V EQ+ AI  +V  +I+ A   G N+I  QE W MPFAFC
Sbjct: 71  PRLVRVAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPFAFC 130

Query: 426 TREKQPWCEFAESAEDGPTTTFLRELAI 509
           TRE+ PW EFAES   GPTT FL +LA+
Sbjct: 131 TRERLPWTEFAESVYTGPTTQFLSKLAV 158


>AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical
           protein C36C9.4 protein.
          Length = 671

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +2

Query: 485 DLPSGTRHKYAMVIVSSILERDEKHSDILWNTAV--VISDTGNVIGKHR 625
           DLP+G   K   +++  I+E  E  +  LWN  +  ++SD  +  GK R
Sbjct: 211 DLPTGLMQKSTNIVLGGIVECSENPTTTLWNALIPFILSDVESHTGKVR 259


>U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical
           protein T25D1.2 protein.
          Length = 438

 Score = 32.7 bits (71), Expect = 0.35
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +2

Query: 485 DLPSGTRHKYAMVIVSSILERDEKHSDILWNTAV--VISDTGNVIGKHR 625
           DLP+G   K   +++  I+E  E  +  LWN  +  ++SD  +  GK R
Sbjct: 283 DLPTGLMQKSTNIVLGGIVECSENPTTTLWNALIPFILSDVESHSGKVR 331


>Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical
           protein C37A5.1 protein.
          Length = 512

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -3

Query: 624 RCFPITFPVSLITTAVFQSMSECFSSLSNIEDT-ITIAYLWRVPEGRSWSARLQLIR 457
           +C P+TF ++   T +       F+++  IE+T I IA L +  EG    A+  +IR
Sbjct: 75  KCVPLTFMLAFFVTIIVDRWKNMFANIGFIENTAIAIATLVKGTEGDVLLAKRTIIR 131


>Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical
           protein C34E7.3 protein.
          Length = 256

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = -2

Query: 499 SRRKVVVGPSSADSANSHHGCFSLVQNAKGMFHNSWKQMMLTPSWPATS 353
           SR K+    +S+   +  HG + +V+ AK  F + +++  +TPS P T+
Sbjct: 197 SRMKIRKDSNSSKKEDMEHGDWWIVRVAKMGFESCFQRRRITPSPPPTN 245


>AF038612-1|AAB92043.1|  348|Caenorhabditis elegans Hypothetical
           protein F13B6.1 protein.
          Length = 348

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -2

Query: 673 VVVGFVKIADSRNVVLAMFPDHVSGVTNYNR 581
           V+ GFV + DS+++V     D + G+TNY++
Sbjct: 156 VLNGFVGLPDSKDMVQFFDSDSIEGLTNYDQ 186


>Z81066-5|CAB02969.1|  777|Caenorhabditis elegans Hypothetical
           protein F17B5.1a protein.
          Length = 777

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -1

Query: 755 WCRPKQMFTANLARIWSQIQD 693
           WC P + FT  LA+ +SQ++D
Sbjct: 670 WCPPSRDFTPVLAQFYSQVED 690


>Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical
           protein T21C9.3b protein.
          Length = 565

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 321 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 455
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical
           protein T21C9.3a protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 321 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 455
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>Z68134-4|CAA92224.1|  567|Caenorhabditis elegans Hypothetical
           protein T27A8.5 protein.
          Length = 567

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +2

Query: 485 DLPSGTRHKYAMVIVSSILERDEKHSDILWNTAV--VISDTGNVIGK 619
           DLP G   K   VI+  I+E  +  S  LWN  +   ++D  + IG+
Sbjct: 129 DLPIGLMQKSTHVILEGIVECSDTPSTALWNALIPMFMTDIEHHIGR 175


>AF016416-8|AAB65271.1|  388|Caenorhabditis elegans Hypothetical
           protein F29A7.1 protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +2

Query: 572 WNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYM 676
           WN  + + D   ++   +  H+ R GD+   NY++
Sbjct: 266 WNKKIAMKDVPFIVYSPQFEHVIRGGDWENENYFL 300


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,888,965
Number of Sequences: 27780
Number of extensions: 463657
Number of successful extensions: 1503
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1503
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)