Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0897
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   5.5  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   5.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   5.5  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   5.5  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    21   7.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.6  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 560 LLWIGFFPNF 589
           LLWI FF NF
Sbjct: 143 LLWISFFLNF 152


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 396 HICLLVTRRSTLLYTLAHSSLFTIGTRTXS 307
           H+  LVT  +TL  T+   + +  GT+T S
Sbjct: 147 HLSGLVTIVATLTVTIIFFASYQYGTKTYS 176


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 396 HICLLVTRRSTLLYTLAHSSLFTIGTRTXS 307
           H+  LVT  +TL  T+   + +  GT+T S
Sbjct: 147 HLSGLVTIVATLTVTIIFFASYQYGTKTYS 176


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 219 WGXTXTQNYNIYSKKGSTILGHQ 287
           +  T TQ    YS+ GS  L HQ
Sbjct: 218 YSPTFTQQQTQYSQYGSWFLPHQ 240


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 639 HSLLIPKYLGIYRHY 595
           +S LIP YL ++ HY
Sbjct: 2   YSYLIPLYLFLFVHY 16


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 663 TTVFFTEXHSLLIPKYLGIYRHYCSKFGK 577
           +TV+ T    +L+   LG+Y  Y    GK
Sbjct: 4   STVYDTVSWLILLSLLLGLYPSYLQTVGK 32


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 267 STILGHQDPNL 299
           +T+LGHQ+P L
Sbjct: 389 NTVLGHQNPYL 399


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 267 STILGHQDPNL 299
           +T+LGHQ+P L
Sbjct: 281 NTVLGHQNPYL 291


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,667
Number of Sequences: 336
Number of extensions: 3094
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)