Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0897
         (693 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    51   9e-09
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   2.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.8  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   4.8  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 51.2 bits (117), Expect = 9e-09
 Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
 Frame = +3

Query: 36  VQQIIAHENYDPNDKD--QQNDIALLRLSRNAQFNDFVSPICLPTSNELRQNEFESDYME 209
           + ++I H  YD  +KD  Q NDIALL+  ++ +F D V P CLP  + L  + F    + 
Sbjct: 236 INKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPACLPFQHFL--DSFAGSDVT 293

Query: 210 VAGWGXT 230
           V GWG T
Sbjct: 294 VLGWGHT 300



 Score = 37.1 bits (82), Expect = 2e-04
 Identities = 21/74 (28%), Positives = 38/74 (51%)
 Frame = +2

Query: 287 GSESDVKLXVRVPIVNREECANVYSNVDRRVTNKQICAGGXAGXDSCRGDSGGALMGQSP 466
           G  S +     + ++ + EC   Y N+   + N  +CA    G D+C+ DSGG ++ Q+P
Sbjct: 304 GMLSHILQKTTLNMLTQVECYKYYGNI---MVNA-MCAYAK-GKDACQMDSGGPVLWQNP 358

Query: 467 KANNWYVFGVVSYG 508
           +       G++S+G
Sbjct: 359 RTKRLVNIGIISWG 372



 Score = 25.0 bits (52), Expect = 0.68
 Identities = 8/13 (61%), Positives = 13/13 (100%)
 Frame = +1

Query: 547 TRVGSFMDWILSK 585
           T+VGS++DWI+S+
Sbjct: 383 TKVGSYIDWIVSQ 395


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +3

Query: 243 YNIYSKKGSTILGH 284
           +NIYS+KG  ILG+
Sbjct: 351 HNIYSEKGLNILGN 364


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +3

Query: 243 YNIYSKKGSTILGH 284
           +NIYS+KG  ILG+
Sbjct: 351 HNIYSEKGLNILGN 364


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -1

Query: 468  LGDWPISAPPESPRQESXPAKPPAHI-CLLVTRRS 367
            +G  P+S P  +   E  P+ PP  + C  +T +S
Sbjct: 1093 VGSGPLSEPLLTQTMEDVPSIPPEDVRCAALTSQS 1127


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -1

Query: 468  LGDWPISAPPESPRQESXPAKPPAHI-CLLVTRRS 367
            +G  P+S P  +   E  P+ PP  + C  +T +S
Sbjct: 1089 VGSGPLSEPLLTQTMEDVPSIPPEDVRCAALTSQS 1123


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 679 TDSHHYDRFLHRXS 638
           TDS HYDR+    S
Sbjct: 171 TDSRHYDRYKEEES 184


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,465
Number of Sequences: 438
Number of extensions: 3701
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)