Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0896
(657 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 299 1e-81
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 295 3e-80
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 290 6e-79
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 177 9e-45
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 131 4e-31
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 122 3e-28
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 120 1e-27
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 119 2e-27
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 119 2e-27
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 4e-27
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 6e-27
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 118 6e-27
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 90 1e-18
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 2e-17
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 3e-17
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 75 4e-14
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 5e-14
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 73 3e-13
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 67 1e-11
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 65 4e-11
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 51 1e-06
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 44 1e-04
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 40 0.002
SB_39714| Best HMM Match : Lipin_N (HMM E-Value=0) 31 0.62
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 2.5
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 4.4
SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18) 28 5.8
SB_28870| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_12136| Best HMM Match : ResIII (HMM E-Value=0.24) 28 5.8
SB_4425| Best HMM Match : DNA_ligase_A_M (HMM E-Value=0) 28 7.7
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 28 7.7
SB_29113| Best HMM Match : RVT_1 (HMM E-Value=0.0066) 28 7.7
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 299 bits (734), Expect = 1e-81
Identities = 144/199 (72%), Positives = 151/199 (75%)
Frame = +2
Query: 59 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 238
L+KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG
Sbjct: 211 LFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG 270
Query: 239 QVRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 418
+ +LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL
Sbjct: 271 KYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 330
Query: 419 DVVRKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQT 598
DVVRKE+ESCDCLQGFQLTH + P P PK
Sbjct: 331 DVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSD 390
Query: 599 LSSNHTNATLSVHQLVENT 655
NATLSVHQLVENT
Sbjct: 391 TVVEPYNATLSVHQLVENT 409
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 295 bits (723), Expect = 3e-80
Identities = 143/196 (72%), Positives = 148/196 (75%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG+
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 428 RKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTLSS 607
RKE+ESCDCLQGFQLTH + P P PK
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 608 NHTNATLSVHQLVENT 655
NATLSVHQLVENT
Sbjct: 181 EPYNATLSVHQLVENT 196
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 290 bits (712), Expect = 6e-79
Identities = 139/196 (70%), Positives = 148/196 (75%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MREIV LQAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG+
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
+L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 428 RKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTLSS 607
RKE+ESCDC+QGFQLTH + P P PK
Sbjct: 121 RKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSIVPSPKVSDTVV 180
Query: 608 NHTNATLSVHQLVENT 655
NATLSVHQLVENT
Sbjct: 181 EPYNATLSVHQLVENT 196
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 182 bits (443), Expect = 2e-46
Identities = 82/92 (89%), Positives = 85/92 (92%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG+
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVF 343
ILVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 177 bits (430), Expect = 9e-45
Identities = 88/133 (66%), Positives = 92/133 (69%)
Frame = +2
Query: 257 ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 436
+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE
Sbjct: 9 VLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 68
Query: 437 SESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTLSSNHT 616
+ESCDC+QGFQLTH + P P PK
Sbjct: 69 AESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIMNTFSVVPSPKVSDTVVEPY 128
Query: 617 NATLSVHQLVENT 655
NATLSVHQLVENT
Sbjct: 129 NATLSVHQLVENT 141
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 131 bits (317), Expect = 4e-31
Identities = 56/81 (69%), Positives = 68/81 (83%)
Frame = +2
Query: 230 SGGQVRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 409
+GG+ ILVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 410 SVLDVVRKESESCDCLQGFQL 472
++ DV+RKE+E+CDC+QG QL
Sbjct: 71 NIFDVLRKEAENCDCMQGVQL 91
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/28 (75%), Positives = 26/28 (92%)
Frame = +1
Query: 508 GTLLISKIREEYPDRIMNTYSVVPSAKV 591
GTL++SKIREEYPDRI++ +SVVPS KV
Sbjct: 104 GTLILSKIREEYPDRILSAFSVVPSPKV 131
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 122 bits (293), Expect = 3e-28
Identities = 58/139 (41%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 241
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 242 VRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+ VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 422 VVRKESESCDCLQGFQLTH 478
+RK ++ C LQGF + H
Sbjct: 121 RIRKLADQCTGLQGFLIFH 139
Score = 122 bits (293), Expect = 3e-28
Identities = 57/141 (40%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Frame = +2
Query: 62 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 235
Y+ RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 432 YEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 491
Query: 236 GQVRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 415
G+ + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 492 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLV 551
Query: 416 LDVVRKESESCDCLQGFQLTH 478
LD +RK ++ C LQGF + H
Sbjct: 552 LDRIRKLADQCTGLQGFLIFH 572
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + +++ P+ +VS VVEPY
Sbjct: 151 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPY 185
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + +++ P+ +VS VVEPY
Sbjct: 584 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPY 618
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 120 bits (289), Expect = 1e-27
Identities = 56/139 (40%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 241
+RE + + GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 242 VRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 422 VVRKESESCDCLQGFQLTH 478
+RK ++ C LQGF + H
Sbjct: 706 RIRKLADQCTGLQGFLIFH 724
Score = 119 bits (286), Expect = 2e-27
Identities = 57/142 (40%), Positives = 81/142 (57%), Gaps = 2/142 (1%)
Frame = +2
Query: 59 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEAS 232
L RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 62 LILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETG 121
Query: 233 GGQVRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS 412
G+ + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 122 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 181
Query: 413 VLDVVRKESESCDCLQGFQLTH 478
VLD +RK ++ C LQGF + H
Sbjct: 182 VLDRIRKLADQCTGLQGFLIFH 203
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 71 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQV 244
RE + + GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 245 RAPPILVDLEPGTMDSV 295
+ VDLEP + +
Sbjct: 574 VPRAVFVDLEPTVRECI 590
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + +++ P+ +VS VVEPY
Sbjct: 736 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPY 770
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + +++ P+ ++S VVEPY
Sbjct: 215 SLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPY 249
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 119 bits (286), Expect = 2e-27
Identities = 55/138 (39%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
Frame = +2
Query: 71 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQV 244
RE + + GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 245 RAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 424
+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 425 VRKESESCDCLQGFQLTH 478
+RK ++ C LQGF + H
Sbjct: 121 IRKLADQCTGLQGFLIFH 138
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + +++ P+ +VS VVEPY
Sbjct: 150 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPY 184
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 119 bits (286), Expect = 2e-27
Identities = 54/141 (38%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Frame = +2
Query: 62 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 235
Y+ RE V + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 417 YEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 476
Query: 236 GQVRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 415
G+ + VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+V
Sbjct: 477 GKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNV 536
Query: 416 LDVVRKESESCDCLQGFQLTH 478
LD +RK ++ C LQGF + H
Sbjct: 537 LDRIRKLADQCSGLQGFLVFH 557
Score = 100 bits (239), Expect = 1e-21
Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Frame = +2
Query: 113 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQVRAPPILVDLEPGTM 286
+G WE+ EHGI P G D + + N +++E G+ + DLEP +
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 287 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 466
D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK ++ C LQGF
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
Query: 467 QLTH 478
+ H
Sbjct: 121 LIFH 124
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + +++ P+ ++S VVEPY
Sbjct: 136 SLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPY 170
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +1
Query: 514 LLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
LL+ ++ +Y + +++ P+ ++S VVEPY
Sbjct: 570 LLLERLSVDYGKKSKLEFAIYPAPQISTAVVEPY 603
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 118 bits (284), Expect = 4e-27
Identities = 54/141 (38%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Frame = +2
Query: 62 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 235
Y+ RE + + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 803 YEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 862
Query: 236 GQVRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 415
G+ + DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 863 GKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLV 922
Query: 416 LDVVRKESESCDCLQGFQLTH 478
LD +RK ++ C LQGF + H
Sbjct: 923 LDRIRKLADQCTGLQGFLIFH 943
Score = 115 bits (277), Expect = 3e-26
Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 2/138 (1%)
Frame = +2
Query: 71 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQV 244
RE + + GQ G QIG WE+ EHGI P G D + + N ++ E G+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 245 RAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 424
+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 425 VRKESESCDCLQGFQLTH 478
+RK ++ C LQGF + H
Sbjct: 493 LRKLADGCTGLQGFLIFH 510
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + +++ P+ ++S VVEPY
Sbjct: 955 SLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPY 989
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 118 bits (283), Expect = 6e-27
Identities = 54/139 (38%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 241
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 242 VRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 422 VVRKESESCDCLQGFQLTH 478
+RK ++ C LQGF + H
Sbjct: 121 RLRKLADGCTGLQGFLIFH 139
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + +++ P+ ++S VVEPY
Sbjct: 151 SLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPY 185
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 118 bits (283), Expect = 6e-27
Identities = 55/139 (39%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 241
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 242 VRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 422 VVRKESESCDCLQGFQLTH 478
RK ++ C LQGF + H
Sbjct: 121 RCRKLADQCTGLQGFLIFH 139
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + +++ P+ ++S VVEPY
Sbjct: 151 SLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPY 185
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 90.2 bits (214), Expect = 1e-18
Identities = 50/139 (35%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 241
MRE + + GQ G QIG WE+ EHGI P G D + N +++E G+
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 242 VRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+ VDLEP + P+ + G+ A NN+A+GHYT G + VD VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 422 VVRKESESCDCLQGFQLTH 478
+RK ++ C LQGF + H
Sbjct: 111 RLRKLADQCSGLQGFFIFH 129
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 86.2 bits (204), Expect = 2e-17
Identities = 45/152 (29%), Positives = 71/152 (46%)
Frame = +2
Query: 200 ERINVYYNEASGGQVRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 379
+ N ++ E G+ + VDLEP +D +R+G + Q+F P+ + G+ A NN+A+G
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
Query: 380 HYTEGAELVDSVLDVVRKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES* 559
HYT G E +D LD +RK ++ C LQGF + H +S
Sbjct: 72 HYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSK 131
Query: 560 THTQ*SPRPKYQTLSSNHTNATLSVHQLVENT 655
P P+ T N+ LS H +E++
Sbjct: 132 LEFAVYPAPQISTAVVEPYNSILSTHTTLEHS 163
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 85.8 bits (203), Expect = 3e-17
Identities = 36/86 (41%), Positives = 57/86 (66%)
Frame = +2
Query: 221 NEASGGQVRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 400
+EA+ G+ +LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 401 LVDSVLDVVRKESESCDCLQGFQLTH 478
+V+ V+D +RK ++ C LQGF + H
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGFLIFH 1050
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 75.4 bits (177), Expect = 4e-14
Identities = 40/101 (39%), Positives = 52/101 (51%)
Frame = +2
Query: 347 QSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHXXXXXXXXXXXXXXXX 526
Q+ A NNWAKG YTEGAEL+DS +D +RK +E+CD +QGFQ+ H
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLS 61
Query: 527 XXVKSTPTES*THTQ*SPRPKYQTLSSNHTNATLSVHQLVE 649
+ P + P P + NATLS HQLV+
Sbjct: 62 KIREEYPDRLVSSFCVLPSPLVSETVTEPYNATLSFHQLVD 102
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 74.9 bits (176), Expect = 5e-14
Identities = 31/64 (48%), Positives = 44/64 (68%)
Frame = +2
Query: 287 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 466
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 467 QLTH 478
+ H
Sbjct: 73 LIFH 76
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + +++ P+ ++S VVEPY
Sbjct: 88 SLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPY 122
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 72.5 bits (170), Expect = 3e-13
Identities = 30/62 (48%), Positives = 43/62 (69%)
Frame = +2
Query: 293 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQL 472
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C LQGF +
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 473 TH 478
H
Sbjct: 63 FH 64
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + +++ P+ ++S VVEPY
Sbjct: 76 SLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPY 110
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/62 (43%), Positives = 41/62 (66%)
Frame = +2
Query: 293 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQL 472
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK ++ C LQGF +
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 473 TH 478
H
Sbjct: 63 FH 64
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + ++V P+ ++S VVEPY
Sbjct: 76 SLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPY 110
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 65.3 bits (152), Expect = 4e-11
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Frame = +2
Query: 77 IVHLQAGQCGNQIGAKFWEIISDE------HGIDPTGAYHGDSDLQLERINVYYNEASGG 238
IV LQ GQCGNQIG + +++I ++ + ++ + E + ++ +
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 239 QVRAPPILVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVD 409
+ A + +D+E + S G P F Q G+GNNWA G G + +D
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSID 122
Query: 410 SVLDVVRKESESCDCLQGF 466
VLD+V++E E CD L GF
Sbjct: 123 KVLDLVQREVEKCDRLDGF 141
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +2
Query: 293 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 433
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGQ 241
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GG+
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 242 VRAPPILVDLEPGTMDSVR 298
+ VDLEP + ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 293 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 433
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/36 (58%), Positives = 30/36 (83%)
Frame = +1
Query: 508 GTLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
GTL++ ++EEYPDRI+++ SV PS +VS+ VVEPY
Sbjct: 29 GTLILYHLQEEYPDRILSSVSVFPSPRVSEIVVEPY 64
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/77 (32%), Positives = 33/77 (42%)
Frame = +2
Query: 425 VRKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTLS 604
+RKE+E CD +QGFQL H + P + P P+ +
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSGLGTLILYHLQEEYPDRILSSVSVFPSPRVSEIV 60
Query: 605 SNHTNATLSVHQLVENT 655
NA LSVHQL+E T
Sbjct: 61 VEPYNAALSVHQLLETT 77
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 125 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 226
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 43.6 bits (98), Expect = 1e-04
Identities = 42/138 (30%), Positives = 59/138 (42%), Gaps = 7/138 (5%)
Frame = +2
Query: 86 LQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRAPPILV 265
L GQCGNQIG + ++ + P H D G++R + V
Sbjct: 6 LPVGQCGNQIGHELMTLVEKQCEGKPLS--HRD-----------------GKLRC--VCV 44
Query: 266 DLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLDV 424
D E + S R G GQ R N + G+ G GNN+A G++ G L+ +D
Sbjct: 45 DSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDA 103
Query: 425 VRKESESCDCLQGFQLTH 478
+RKE E CD G + H
Sbjct: 104 MRKEVERCDSFAGTIVMH 121
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +2
Query: 56 NLYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYN 223
++ MRE + + GQ G QIG WE+ EHGI P G H SD +R + +++
Sbjct: 192 SIQTMRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFS 249
Query: 224 EASGGQ 241
E + G+
Sbjct: 250 ETASGK 255
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y R ++V P+ ++S VVEPY
Sbjct: 282 SLLMERLSVDYGKRSKLEFAVYPAPQISTAVVEPY 316
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +2
Query: 194 QLERINVYYNEASGGQVRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 370
+L+ I V ++ ++A +L+D+E G ++++ GP +F + SG GNNW
Sbjct: 57 RLKDIPVGNSKGKIKSLKARAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 508 GTLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
GT +++ + ++YPD T +V PSA D + PY
Sbjct: 162 GTYVLNLLHDDYPDVYRFTTAVYPSAD-DDVITSPY 196
>SB_39714| Best HMM Match : Lipin_N (HMM E-Value=0)
Length = 1311
Score = 31.5 bits (68), Expect = 0.62
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = -3
Query: 406 NELSTLCVVSLGPVVAGAGL-SEDEVVRTEDLSERSGADRVHGAGLQVDENGRGTYLXAG 230
+E + CVV +G V G+G+ +D+ V +D S D G+G V ++G G
Sbjct: 1056 SENDSCCVVDVGGDVNGSGVDGDDDDVDGDDGS--GSVDGDDGSGGGVGDDGSGVGDDDD 1113
Query: 229 GFIVVYIDALQLQVRVPMVGTGGV---DAVLVRDDLPELSSN 113
IVV + + L V V M+ G+ D V D++ L N
Sbjct: 1114 DCIVVLV--MMLDVAVVMIKEEGIYLDDLTSVDDEIARLYLN 1153
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 381 CPLAQLLPAPDCPKTKLSGRKICP 310
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 381 CPLAQLLPAPDCPKTKLSGRKICP 310
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 7.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 381 CPLAQLLPAPDCPKTKLSGRKICP 310
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +1
Query: 520 ISKIREEYPDRIMNTYSVVPSAKVS 594
+ K++E+YPD I++++ + P K S
Sbjct: 484 LKKLQEQYPDHILSSFELFPCEKAS 508
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -1
Query: 357 APDCPKTKLSGRKICPKGPERTESMVPGSKST 262
A DCP ++ +GR +CP P +S + +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 525 KDP*RVPRQNHEHILSSPLGQSIR 596
+D RV R+N HI+S+PL Q IR
Sbjct: 245 EDRGRVYRRNRRHIISTPLDQPIR 268
>SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18)
Length = 1052
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 537 RVPRQNHEHILSSPLGQSIR 596
RV R+N HI+S+PL Q IR
Sbjct: 971 RVYRRNRRHIISTPLDQPIR 990
>SB_28870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 537 RVPRQNHEHILSSPLGQSIR 596
RV R+N HI+S+PL Q IR
Sbjct: 78 RVYRRNRRHIISTPLDQPIR 97
>SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1052
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 537 RVPRQNHEHILSSPLGQSIR 596
RV R+N HI+S+PL Q IR
Sbjct: 971 RVYRRNRRHIISTPLDQPIR 990
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 223 IVVYIDALQLQVRVPM-VGTGGVDAVLVRDDLPELSSN 113
I VY DA++LQV P+ G+D + V D EL +
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVELQGS 85
>SB_12136| Best HMM Match : ResIII (HMM E-Value=0.24)
Length = 1118
Score = 28.3 bits (60), Expect = 5.8
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = -3
Query: 364 VAGAGLSED-EVVRTEDLSERSGADRVHGAGLQVDENGRGTYLXAGGFIVVYIDALQLQV 188
VAG LSE ++ L+E ++ H D G A V+Y + +
Sbjct: 624 VAGRPLSEVLQLTGAIQLTEWGFSEACHPYTSGRDLLDSGDLAMAAAREVLYRVGKKDSI 683
Query: 187 RVPMVGTGGVDAVLVRDDLPELSSNLVTTLAG 92
+ P G GG D+++VRD E ++ L LAG
Sbjct: 684 KFPHSGPGGEDSIVVRDH--EEAAYLTNLLAG 713
>SB_4425| Best HMM Match : DNA_ligase_A_M (HMM E-Value=0)
Length = 575
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -2
Query: 203 APTASQSPHG--RHRWGRCRARQR*SPRT*LQSGYHIGRPVDERFPSFCISY 54
A AS S +G HRW R ARQR T ++G GR +D F F + +
Sbjct: 468 AQGASPSAYGASHHRWPRELARQRMGLLTSAETGSIPGRDMDGIFLFFGLEF 519
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + +++ P+ ++S VVEPY
Sbjct: 26 SLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPY 60
>SB_29113| Best HMM Match : RVT_1 (HMM E-Value=0.0066)
Length = 444
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 248 HVLXRRRLHCSIH*CAPTASQSPHGRHRWGR 156
H + +RR S+H C T + P GR+RW R
Sbjct: 221 HDVVKRRPVPSLHACRSTL-EDPRGRYRWTR 250
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,626,812
Number of Sequences: 59808
Number of extensions: 473724
Number of successful extensions: 1400
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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