Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0896
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 289 9e-79
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 282 1e-76
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 275 2e-74
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 275 2e-74
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 274 3e-74
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 273 6e-74
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 177 6e-45
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 177 6e-45
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 126 2e-29
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 126 2e-29
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 124 4e-29
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 124 7e-29
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 124 7e-29
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 124 7e-29
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 119 2e-27
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 119 2e-27
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 118 5e-27
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 117 6e-27
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 117 6e-27
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 117 6e-27
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 116 1e-26
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 115 3e-26
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 112 2e-25
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 96 2e-20
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 94 9e-20
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 94 9e-20
Z34799-4|CAD44130.2| 691|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical pr... 28 6.7
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 289 bits (710), Expect = 9e-79
Identities = 139/196 (70%), Positives = 149/196 (76%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MREIVH+QAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGG+
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 428 RKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTLSS 607
RKE+ESCDCLQGFQ+TH + P P PK
Sbjct: 121 RKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVV 180
Query: 608 NHTNATLSVHQLVENT 655
NATLSVHQLVENT
Sbjct: 181 EPYNATLSVHQLVENT 196
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 282 bits (692), Expect = 1e-76
Identities = 135/196 (68%), Positives = 146/196 (74%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GG+
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 428 RKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTLSS 607
RKE+E CDCLQGFQLTH + P + P PK
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVV 180
Query: 608 NHTNATLSVHQLVENT 655
NATLSVHQLVENT
Sbjct: 181 EPYNATLSVHQLVENT 196
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 275 bits (675), Expect = 2e-74
Identities = 133/196 (67%), Positives = 144/196 (73%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MREIVH+QAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA +
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 428 RKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTLSS 607
RKE+ES DCLQGFQLTH + P P PK
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 608 NHTNATLSVHQLVENT 655
NATLSVHQLVENT
Sbjct: 181 EPYNATLSVHQLVENT 196
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 275 bits (675), Expect = 2e-74
Identities = 133/196 (67%), Positives = 144/196 (73%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MREIVH+QAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA +
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 428 RKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTLSS 607
RKE+ES DCLQGFQLTH + P P PK
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 608 NHTNATLSVHQLVENT 655
NATLSVHQLVENT
Sbjct: 181 EPYNATLSVHQLVENT 196
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 274 bits (673), Expect = 3e-74
Identities = 130/196 (66%), Positives = 145/196 (73%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ G+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 428 RKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTLSS 607
RKE+E CDCLQGFQLTH + P + P PK
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTVV 180
Query: 608 NHTNATLSVHQLVENT 655
NATLSVHQLVENT
Sbjct: 181 EPYNATLSVHQLVENT 196
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 273 bits (670), Expect = 6e-74
Identities = 129/196 (65%), Positives = 145/196 (73%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ G+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 428 RKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTLSS 607
RKE+E CDCLQGFQLTH + P + P PK
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVV 180
Query: 608 NHTNATLSVHQLVENT 655
NATLSVHQLVENT
Sbjct: 181 EPYNATLSVHQLVENT 196
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 177 bits (431), Expect = 6e-45
Identities = 77/137 (56%), Positives = 104/137 (75%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G +
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
ILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 428 RKESESCDCLQGFQLTH 478
R+E+E+ D L+GFQL H
Sbjct: 121 RREAEAADSLEGFQLIH 137
Score = 60.9 bits (141), Expect = 8e-10
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = +1
Query: 508 GTLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPYKCDSLSSP 639
G+LLISK+REEY D+ ++T S++PSAKVSDTVVEPY LS P
Sbjct: 148 GSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNA-ILSMP 190
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 177 bits (431), Expect = 6e-45
Identities = 77/137 (56%), Positives = 104/137 (75%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G +
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
ILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 428 RKESESCDCLQGFQLTH 478
R+E+E+ D L+GFQL H
Sbjct: 121 RREAEAADSLEGFQLIH 137
Score = 60.9 bits (141), Expect = 8e-10
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = +1
Query: 508 GTLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPYKCDSLSSP 639
G+LLISK+REEY D+ ++T S++PSAKVSDTVVEPY LS P
Sbjct: 148 GSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNA-ILSMP 190
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 126 bits (303), Expect = 2e-29
Identities = 54/137 (39%), Positives = 82/137 (59%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MRE++ + GQ G QIG WE+ EHGI P G D E ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 428 RKESESCDCLQGFQLTH 478
R+ +++C LQGF + H
Sbjct: 121 RRLADNCSGLQGFFVFH 137
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + +S+ P+ +VS VVEPY
Sbjct: 149 SLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPY 183
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 126 bits (303), Expect = 2e-29
Identities = 54/137 (39%), Positives = 82/137 (59%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MRE++ + GQ G QIG WE+ EHGI P G D E ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 428 RKESESCDCLQGFQLTH 478
R+ +++C LQGF + H
Sbjct: 121 RRLADNCSGLQGFFVFH 137
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + +S+ P+ +V VVEPY
Sbjct: 149 SLLMERLSVDYGKKSKLEFSIYPAPQVCTAVVEPY 183
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 124 bits (300), Expect = 4e-29
Identities = 60/139 (43%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGQ 241
MREIV + GQ G QIG WE+ EHGI P G D+ +E N +++E G+
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 242 VRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
I VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 422 VVRKESESCDCLQGFQLTH 478
VR+ +E C LQGF + H
Sbjct: 121 RVRRLTERCQSLQGFLIFH 139
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 124 bits (298), Expect = 7e-29
Identities = 54/137 (39%), Positives = 83/137 (60%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MRE++ + GQ G QIG WE+ EHGI P G S + E ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 428 RKESESCDCLQGFQLTH 478
R+ +++C LQGF + H
Sbjct: 121 RRLADNCSGLQGFFVFH 137
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + +S+ P+ +VS VVEPY
Sbjct: 149 SLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPY 183
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 124 bits (298), Expect = 7e-29
Identities = 56/137 (40%), Positives = 85/137 (62%), Gaps = 1/137 (0%)
Frame = +2
Query: 71 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGQVR 247
RE V + GQ G QIG WE+ EHG+D G + + + + + +++E+ G+
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
I VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD +
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRI 125
Query: 428 RKESESCDCLQGFQLTH 478
RK++E+C+ LQGF + H
Sbjct: 126 RKQTENCEGLQGFLVFH 142
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ E+ + +SV P+ +VS +VVEPY
Sbjct: 154 SLLMERLSVEFGKKSKLEFSVYPAPQVSTSVVEPY 188
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 124 bits (298), Expect = 7e-29
Identities = 54/137 (39%), Positives = 83/137 (60%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MRE++ + GQ G QIG WE+ EHGI P G S + E ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 428 RKESESCDCLQGFQLTH 478
R+ +++C LQGF + H
Sbjct: 121 RRLADNCSGLQGFFVFH 137
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + +S+ P+ +VS VVEPY
Sbjct: 149 SLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPY 183
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 119 bits (287), Expect = 2e-27
Identities = 51/137 (37%), Positives = 81/137 (59%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MRE++ + GQ G QIG WE+ EHGI P G + + ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 428 RKESESCDCLQGFQLTH 478
R+ +++C LQGF + H
Sbjct: 121 RRLADNCSGLQGFFVFH 137
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + +S+ P+ +VS VVEPY
Sbjct: 149 SLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPY 183
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 119 bits (287), Expect = 2e-27
Identities = 51/137 (37%), Positives = 81/137 (59%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MRE++ + GQ G QIG WE+ EHGI P G + + ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 428 RKESESCDCLQGFQLTH 478
R+ +++C LQGF + H
Sbjct: 121 RRLADNCSGLQGFFVFH 137
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + +S+ P+ +VS VVEPY
Sbjct: 149 SLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPY 183
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 118 bits (283), Expect = 5e-27
Identities = 56/139 (40%), Positives = 85/139 (61%), Gaps = 3/139 (2%)
Frame = +2
Query: 71 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGQ 241
RE++ + GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GG+
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 242 VRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+ VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D
Sbjct: 67 HVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMD 126
Query: 422 VVRKESESCDCLQGFQLTH 478
V++ +E+C+ LQGF + H
Sbjct: 127 RVKRLAENCNGLQGFVIFH 145
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 117 bits (282), Expect = 6e-27
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQ 241
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 242 VRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 422 VVRKESESCDCLQGFQLTH 478
+R+ +++C LQGF + H
Sbjct: 121 RIRRLADNCTGLQGFLVFH 139
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + +S+ P+ +VS VVEPY
Sbjct: 151 SLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPY 185
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 117 bits (282), Expect = 6e-27
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQ 241
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 242 VRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 422 VVRKESESCDCLQGFQLTH 478
+R+ +++C LQGF + H
Sbjct: 121 RIRRLADNCTGLQGFLVFH 139
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + +S+ P+ +VS VVEPY
Sbjct: 151 SLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPY 185
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 117 bits (282), Expect = 6e-27
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQ 241
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 242 VRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 422 VVRKESESCDCLQGFQLTH 478
+R+ +++C LQGF + H
Sbjct: 121 RIRRLADNCTGLQGFLVFH 139
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + +S+ P+ +VS VVEPY
Sbjct: 151 SLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPY 185
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 116 bits (279), Expect = 1e-26
Identities = 53/140 (37%), Positives = 84/140 (60%), Gaps = 2/140 (1%)
Frame = +2
Query: 65 KMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGG 238
+ RE++ + GQ G Q+G WE+ EHGI P G + + L ++ N +++E G
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 239 QVRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 418
+ I+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 419 DVVRKESESCDCLQGFQLTH 478
D VR+ E+C LQGF + H
Sbjct: 125 DRVRRLVENCRGLQGFLVFH 144
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 115 bits (277), Expect = 3e-26
Identities = 51/138 (36%), Positives = 81/138 (58%), Gaps = 2/138 (1%)
Frame = +2
Query: 71 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQV 244
RE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 245 RAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 424
++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 425 VRKESESCDCLQGFQLTH 478
+R+ +++C LQGF + H
Sbjct: 121 IRRLADNCTGLQGFLVFH 138
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
+LL+ ++ +Y + +S+ P+ +VS VVEPY
Sbjct: 150 SLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPY 184
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 112 bits (269), Expect = 2e-25
Identities = 51/137 (37%), Positives = 82/137 (59%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MRE++ + GQ G QIG WE+ EHGI P G + D + ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHV 59
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD +
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 428 RKESESCDCLQGFQLTH 478
R+ + +C+ LQGF + H
Sbjct: 120 RRLANNCEGLQGFFVFH 136
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +1
Query: 511 TLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
++L+ ++ EY + +S+ P+ ++S +VVEPY
Sbjct: 148 SMLMERLSAEYGKKSKLEFSIYPAPQISTSVVEPY 182
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/114 (40%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
Frame = +2
Query: 146 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGQVRAPPILVDLEPGTMDSVRSGPFGQ 316
EHGI P G YH + D + E IN ++ E +GG+ + VDLEP +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 317 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTH 478
+F P+ + G+ A N +A+G YT G E++D V+D V++ +E+C+ LQGF + H
Sbjct: 64 LFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFH 117
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 93.9 bits (223), Expect = 9e-20
Identities = 46/137 (33%), Positives = 76/137 (55%), Gaps = 3/137 (2%)
Frame = +2
Query: 77 IVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRAPP 256
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 257 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 427
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 428 RKESESCDCLQGFQLTH 478
+E+E+ + L G TH
Sbjct: 125 IREAENTNNLDGILFTH 141
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +1
Query: 508 GTLLISKIREEYPDRIMNTYSVVPSAKVS-DTVVEPY 615
G+LL+ ++RE +P +++ TYSV ++ S D VV PY
Sbjct: 152 GSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPY 188
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 93.9 bits (223), Expect = 9e-20
Identities = 46/137 (33%), Positives = 76/137 (55%), Gaps = 3/137 (2%)
Frame = +2
Query: 77 IVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRAPP 256
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 257 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 427
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 428 RKESESCDCLQGFQLTH 478
+E+E+ + L G TH
Sbjct: 125 IREAENTNNLDGILFTH 141
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +1
Query: 508 GTLLISKIREEYPDRIMNTYSVVPSAKVS-DTVVEPY 615
G+LL+ ++RE +P +++ TYSV ++ S D VV PY
Sbjct: 152 GSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPY 188
>Z34799-4|CAD44130.2| 691|Caenorhabditis elegans Hypothetical
protein F34D10.7 protein.
Length = 691
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 137 ISDEHGIDPTG-AYHGDS-DLQLERINVYYNEASGGQVRAPPILVDLEPGTMDSVRSGPF 310
I D+HG P HG +++ + N N+ GQ+ + P+L DLE D + +G
Sbjct: 166 IEDKHGHTPFYYRTHGQRLNVRSMKDNAVMNQLISGQL-SRPLLQDLEEDIYDWIHTGNI 224
Query: 311 GQI 319
G++
Sbjct: 225 GKL 227
>Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical
protein R09E10.9 protein.
Length = 443
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 162 PPVPTMGTLTCSWSASMYTTMKPPAXKYVPRPFSSTWSPAPWTLSAP 302
P P +T + SM T+ PP +P P S + +P P T AP
Sbjct: 360 PNPPQKSLITPTVPPSMIQTVNPPTVSALPSP-SVSPAPVPTTSCAP 405
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,685,843
Number of Sequences: 27780
Number of extensions: 345702
Number of successful extensions: 954
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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