Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0896
(657 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 271 3e-73
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 268 3e-72
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 268 3e-72
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 267 4e-72
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 267 4e-72
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 265 2e-71
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 265 2e-71
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 264 5e-71
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 263 6e-71
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 125 2e-29
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 124 5e-29
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 124 5e-29
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 120 6e-28
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 120 6e-28
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 118 3e-27
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 118 3e-27
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 103 1e-22
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 102 2e-22
At4g37190.1 68417.m05265 expressed protein 30 1.6
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 29 2.1
At2g45050.1 68415.m05608 zinc finger (GATA type) family protein ... 29 2.7
At2g24200.1 68415.m02891 cytosol aminopeptidase identical to cyt... 28 6.3
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 8.3
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 271 bits (664), Expect = 3e-73
Identities = 128/196 (65%), Positives = 145/196 (73%), Gaps = 1/196 (0%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGQV 244
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 245 RAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 424
+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 425 VRKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTLS 604
VRKE+E+CDCLQGFQ+ H + P P PK
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 605 SNHTNATLSVHQLVEN 652
NATLSVHQLVEN
Sbjct: 181 VEPYNATLSVHQLVEN 196
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 268 bits (656), Expect = 3e-72
Identities = 126/195 (64%), Positives = 143/195 (73%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MREI+H+Q GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
IL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 428 RKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTLSS 607
RKE+E+CDCLQGFQ+ H + P P PK
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 608 NHTNATLSVHQLVEN 652
NATLSVHQLVEN
Sbjct: 181 EPYNATLSVHQLVEN 195
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 268 bits (656), Expect = 3e-72
Identities = 128/196 (65%), Positives = 143/196 (72%), Gaps = 1/196 (0%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGQV 244
MREI+H+Q GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 245 RAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 424
+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 425 VRKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTLS 604
VRKE+E+CDCLQGFQ+ H + P P PK
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 605 SNHTNATLSVHQLVEN 652
NATLSVHQLVEN
Sbjct: 181 VEPYNATLSVHQLVEN 196
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 267 bits (655), Expect = 4e-72
Identities = 127/195 (65%), Positives = 141/195 (72%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 428 RKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTLSS 607
RKE+E+CDCLQGFQ+ H + P P PK
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 608 NHTNATLSVHQLVEN 652
NATLSVHQLVEN
Sbjct: 181 EPYNATLSVHQLVEN 195
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 267 bits (655), Expect = 4e-72
Identities = 127/195 (65%), Positives = 141/195 (72%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 428 RKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTLSS 607
RKE+E+CDCLQGFQ+ H + P P PK
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 608 NHTNATLSVHQLVEN 652
NATLSVHQLVEN
Sbjct: 181 EPYNATLSVHQLVEN 195
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 265 bits (649), Expect = 2e-71
Identities = 125/195 (64%), Positives = 141/195 (72%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MREI+H+Q GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 428 RKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTLSS 607
RKE+E+CDCLQGFQ+ H + P P PK
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 608 NHTNATLSVHQLVEN 652
NATLSVHQLVEN
Sbjct: 181 EPYNATLSVHQLVEN 195
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 265 bits (649), Expect = 2e-71
Identities = 127/195 (65%), Positives = 141/195 (72%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MREI+H+Q GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 428 RKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTLSS 607
RKE+E+CDCLQGFQ+ H + P P PK
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 608 NHTNATLSVHQLVEN 652
NATLSVHQLVEN
Sbjct: 181 EPYNATLSVHQLVEN 195
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 264 bits (646), Expect = 5e-71
Identities = 125/195 (64%), Positives = 142/195 (72%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MREI+H+Q GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 428 RKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTLSS 607
RKE+E+CDCLQGFQ+ H + P P PK
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 608 NHTNATLSVHQLVEN 652
NATLSVHQLVEN
Sbjct: 181 EPYNATLSVHQLVEN 195
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 263 bits (645), Expect = 6e-71
Identities = 127/195 (65%), Positives = 141/195 (72%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 247
MREI+H+Q GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 248 APPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 427
+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 428 RKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTLSS 607
RKE+E+ DCLQGFQ+ H + P P PK
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 608 NHTNATLSVHQLVEN 652
NATLSVHQLVEN
Sbjct: 181 EPYNATLSVHQLVEN 195
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 125 bits (302), Expect = 2e-29
Identities = 67/198 (33%), Positives = 101/198 (51%), Gaps = 2/198 (1%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 241
MREI+ + GQ G Q+G WE+ EHGI P G DS + + N +++E S GQ
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 242 VRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 422 VVRKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTL 601
+RK +++C LQGF + + +S P P+ T
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTA 180
Query: 602 SSNHTNATLSVHQLVENT 655
N+ LS H L+E+T
Sbjct: 181 VVEPYNSVLSTHSLLEHT 198
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 508 GTLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
G+LL+ ++ ++ + +++ PS +VS VVEPY
Sbjct: 150 GSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPY 185
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 124 bits (299), Expect = 5e-29
Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 2/198 (1%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 241
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 242 VRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 422 VVRKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTL 601
VRK +++C LQGF + + +S P P+ T
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 602 SSNHTNATLSVHQLVENT 655
N+ LS H L+E+T
Sbjct: 181 VVEPYNSVLSTHSLLEHT 198
Score = 31.9 bits (69), Expect = 0.39
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 508 GTLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
G+LL+ ++ +Y + +++ PS +VS VVEPY
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPY 185
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 124 bits (299), Expect = 5e-29
Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 2/198 (1%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 241
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 242 VRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 422 VVRKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTL 601
VRK +++C LQGF + + +S P P+ T
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 602 SSNHTNATLSVHQLVENT 655
N+ LS H L+E+T
Sbjct: 181 VVEPYNSVLSTHSLLEHT 198
Score = 31.9 bits (69), Expect = 0.39
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 508 GTLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
G+LL+ ++ +Y + +++ PS +VS VVEPY
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPY 185
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 120 bits (290), Expect = 6e-28
Identities = 66/198 (33%), Positives = 98/198 (49%), Gaps = 2/198 (1%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 241
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 242 VRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 422 VVRKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTL 601
+RK +++C LQGF + + +S P P+ T
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 602 SSNHTNATLSVHQLVENT 655
N+ LS H L+E+T
Sbjct: 181 VVEPYNSVLSTHSLLEHT 198
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 508 GTLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
G+LL+ ++ +Y + ++V PS +VS +VVEPY
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPY 185
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 120 bits (290), Expect = 6e-28
Identities = 66/198 (33%), Positives = 98/198 (49%), Gaps = 2/198 (1%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 241
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 242 VRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 422 VVRKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTL 601
+RK +++C LQGF + + +S P P+ T
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 602 SSNHTNATLSVHQLVENT 655
N+ LS H L+E+T
Sbjct: 181 VVEPYNSVLSTHSLLEHT 198
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 508 GTLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
G+LL+ ++ +Y + ++V PS +VS +VVEPY
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPY 185
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 118 bits (284), Expect = 3e-27
Identities = 65/198 (32%), Positives = 97/198 (48%), Gaps = 2/198 (1%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 241
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 242 VRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 422 VVRKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTL 601
+RK +++C LQGF + + +S P P+ T
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 602 SSNHTNATLSVHQLVENT 655
N+ LS H L+E+T
Sbjct: 181 VVEPYNSVLSTHSLLEHT 198
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 508 GTLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
G+LL+ ++ +Y + ++V PS +VS +VVEPY
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPY 185
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 118 bits (284), Expect = 3e-27
Identities = 65/198 (32%), Positives = 97/198 (48%), Gaps = 2/198 (1%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 241
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 242 VRAPPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 421
+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 422 VVRKESESCDCLQGFQLTHXXXXXXXXXXXXXXXXXXVKSTPTES*THTQ*SPRPKYQTL 601
+RK +++C LQGF + + +S P P+ T
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 602 SSNHTNATLSVHQLVENT 655
N+ LS H L+E+T
Sbjct: 181 VVEPYNSVLSTHSLLEHT 198
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 508 GTLLISKIREEYPDRIMNTYSVVPSAKVSDTVVEPY 615
G+LL+ ++ +Y + ++V PS +VS +VVEPY
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPY 185
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 103 bits (246), Expect = 1e-22
Identities = 48/138 (34%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
Frame = +2
Query: 71 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRA 250
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 251 PPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 424
+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 425 VRKESESCDCLQGFQLTH 478
+ +E++ D L+GF L H
Sbjct: 122 IDREADGSDSLEGFVLCH 139
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 102 bits (245), Expect = 2e-22
Identities = 48/138 (34%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
Frame = +2
Query: 71 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRA 250
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 251 PPILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 424
+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 425 VRKESESCDCLQGFQLTH 478
+ +E++ D L+GF L H
Sbjct: 122 IDREADGSDSLEGFVLCH 139
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 68 MREIVHLQAGQCGNQIGAKFWEIISDEHGI 157
MREIV +Q G+ N +G+ FW + G+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGL 30
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +2
Query: 401 LVDSVLDVVRKESESCDCLQGF 466
+++SV VVRKE+E+C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At2g45050.1 68415.m05608 zinc finger (GATA type) family protein
identical to cDNA GATA transcription factor 2 GI:2959731
Length = 264
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +3
Query: 162 PPVPTMGTLTCSWSASMYTTMKPPAXKYVPRPFSSTWSPAP 284
P P GT+T + + + P PF+ TWSP P
Sbjct: 94 PANPLGGTMTSVKTETSFPGKPRSKRSRAPAPFAGTWSPMP 134
>At2g24200.1 68415.m02891 cytosol aminopeptidase identical to
cytosol aminopeptidase SP:P30184 from [Arabidopsis
thaliana]; contains Pfam profiles: PF00883 cytosol
aminopeptidase family catalytic domain, PF02789: cytosol
aminopeptidase family N-terminal domain
Length = 520
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = -3
Query: 415 DRVNELSTL---CVVSLGPVVAGAGLSEDEVVR-TEDLSERSG 299
D++ +L+TL CV++LG +AG DE+ + SERSG
Sbjct: 393 DKIVDLATLTGACVIALGTSMAGIYTPSDELAKEVIAASERSG 435
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 74 EIVHLQAGQCGNQIGAKFWEIISD 145
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,866,213
Number of Sequences: 28952
Number of extensions: 329996
Number of successful extensions: 981
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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