Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0895
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    25   0.38 
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   3.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.3  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 458 KIYMLCTTAGSIKPSSLQMLFTR 390
           KIY LC     + PS+L +++ R
Sbjct: 29  KIYALCVVTALVTPSALSIIYYR 51


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +2

Query: 56  HDSIKSQLITDGYAILEDFLH-VAECDEIKAAGLEFTENLPDIEERATFSTTEK 214
           +D+I  + +     +L+ ++  + E       GLE  +N+PD  E      +EK
Sbjct: 30  YDNIDLENVVKNERLLKSYVDCLLEKGRCSPDGLELKKNMPDAIETDCSKCSEK 83


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 341 THCISYIRFSXVTRIVNA*RAFAKSLA 421
           TH +SYI  +   +IVN    F ++ A
Sbjct: 379 THILSYINKASFKKIVNTVATFDETWA 405


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 139 DFITFRNMKKI 107
           DF TFRN KK+
Sbjct: 288 DFDTFRNTKKL 298


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,920
Number of Sequences: 336
Number of extensions: 2769
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)