Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0893
         (848 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0611 - 4567839-4568144,4568280-4569209,4569301-4569566,456...    30   2.7  
10_06_0119 - 10956190-10956754,10956984-10957139,10958402-10958622     29   4.7  
06_02_0148 - 12280794-12280962,12281102-12281210,12281283-122813...    29   4.7  
06_01_0024 + 233101-233189,233259-233340,233430-233493,233636-23...    28   8.2  
04_04_0498 - 25654988-25655168,25658149-25658257,25658376-256584...    28   8.2  

>02_01_0611 -
           4567839-4568144,4568280-4569209,4569301-4569566,
           4569662-4569970,4570497-4570647,4570958-4571012,
           4571137-4571512,4571560-4571797,4571878-4572096,
           4572629-4572910
          Length = 1043

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +2

Query: 299 SENKYWEFSPSFRLMRRGSLTDYSIPDNVTELTTVFISN 415
           +ENK  EF  S + M R  +TD  I + V++ T + +SN
Sbjct: 670 AENKLMEFQQSGKSMLREEVTDVDIAEIVSKWTGIPVSN 708


>10_06_0119 - 10956190-10956754,10956984-10957139,10958402-10958622
          Length = 313

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 20/72 (27%), Positives = 32/72 (44%)
 Frame = +1

Query: 382 RYRVDHSVHIQLQQQDISDRGGKVLAVRRTNRYDG*RLPKGYATWRDVPYPVDAAIVWKE 561
           R+ +D  +   L Q+  +D     L VR T+  DG RL    AT    P   +  + W+ 
Sbjct: 192 RHHLDEGLETSLAQRGAADGSRGRLGVRGTSGEDGDRLGGRGATDGGRPDWRERPVRWRR 251

Query: 562 DTFFFQGPRFWR 597
             +  +  R+WR
Sbjct: 252 PAWRERRGRWWR 263


>06_02_0148 -
           12280794-12280962,12281102-12281210,12281283-12281385,
           12281587-12281618,12281709-12281926,12282035-12282150,
           12282428-12282683,12282912-12282999,12283393-12283468,
           12283562-12283620,12285236-12285305,12285399-12285539
          Length = 478

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 21  RTVGSSQAPRFTKTDSEEFDDAPDLCMTNYDTLQVIHG 134
           RT+  ++ PRFTK  S+  + + D    NY T + I G
Sbjct: 284 RTLVGNRLPRFTKEQSKAINGSFDFIGLNYYTARYIQG 321


>06_01_0024 +
           233101-233189,233259-233340,233430-233493,233636-233826,
           233901-233978,234133-234207,234436-234506,234710-234826,
           234915-235016,235196-235316,235451-235537,235708-235794,
           236237-236338,236629-236692,237554-237580,237581-237636,
           238185-238256,238540-238622,238953-239001,239335-239397,
           239633-239722,239823-239909,240072-240146,240222-240280,
           240511-240604,240681-240899,240998-241092,241504-241594,
           241663-241767,241847-241885,242263-242352,242538-242639,
           242837-242918,243075-243160,243264-243362
          Length = 1030

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -3

Query: 345 LIRRNDGLNSQYLFSEKT 292
           L RR DGLN +Y FS KT
Sbjct: 438 LYRRTDGLNCEYTFSGKT 455


>04_04_0498 -
           25654988-25655168,25658149-25658257,25658376-25658478,
           25658634-25658883,25659011-25659126,25659332-25659587,
           25659713-25659800,25659951-25660025,25660143-25660218,
           25660308-25660366,25660972-25661038,25668502-25668810
          Length = 562

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 359 TDYSIPDNVTELTTVFISNYNNRTYLIEEERY 454
           T Y +PD + ++   F+  YNN    I E  Y
Sbjct: 437 TFYVVPDGIEKMVKYFMRRYNNLPMFITENGY 468


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,391,452
Number of Sequences: 37544
Number of extensions: 563796
Number of successful extensions: 1436
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1436
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)