Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0891
(619 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse t... 64 3e-12
AJ970247-1|CAI96719.1| 132|Anopheles gambiae putative reverse t... 39 1e-04
AJ970248-1|CAI96720.1| 132|Anopheles gambiae putative reverse t... 38 3e-04
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 38 3e-04
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 36 8e-04
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 36 0.001
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 35 0.002
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 35 0.002
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 35 0.002
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 34 0.004
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 33 0.007
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 33 0.010
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 32 0.013
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 31 0.030
AJ970246-1|CAI96718.1| 132|Anopheles gambiae putative reverse t... 30 0.052
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 30 0.052
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 30 0.069
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 30 0.069
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 30 0.069
AJ970250-1|CAI96722.1| 132|Anopheles gambiae putative reverse t... 29 0.12
AJ970243-1|CAI96715.1| 129|Anopheles gambiae putative reverse t... 28 0.21
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 28 0.21
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 25 2.6
AY745225-1|AAU93492.1| 156|Anopheles gambiae cytochrome P450 pr... 23 6.0
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 23 7.9
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 23 7.9
>AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse
transcriptase protein.
Length = 134
Score = 64.1 bits (149), Expect = 3e-12
Identities = 34/84 (40%), Positives = 42/84 (50%)
Frame = -3
Query: 509 YRPISLLPAIGKXYEXXXXXXXXDFVSANKILIDEQFGFRARHSCVHQVHRLTEHXLLGL 330
YRPISLL +GK +E N I+ QFGFR S HQ+HR+T + +
Sbjct: 2 YRPISLLSCLGKIFEKLLESRMALHTFNNNIIPKSQFGFRPSLSTTHQLHRVTNNIVHNR 61
Query: 329 NRRKPIPTGALFFDIAKAFDKVWH 258
RK TG D KAFD +WH
Sbjct: 62 CNRK--STGLALLDTEKAFDSIWH 83
Score = 32.7 bits (71), Expect = 0.010
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -2
Query: 258 QRLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQ 112
Q L+ KL + P L+ I+ ++SNR + + + S AGVPQ
Sbjct: 84 QGLLSKLIKLNFPSYLINIVNSFISNRQNKVHILNSTSSTYTPKAGVPQ 132
>AJ970247-1|CAI96719.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 38.7 bits (86), Expect = 1e-04
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = -2
Query: 252 LIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQ 112
L+ KL +G+PD LV +R YL R++ R+ SR ++GVPQ
Sbjct: 84 LLAKLDRLGLPDPLVAWLRSYLMGRTYSVRMGPHLSRSLRASSGVPQ 130
>AJ970248-1|CAI96720.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 37.5 bits (83), Expect = 3e-04
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = -2
Query: 252 LIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQ 112
L+ KL +G+PD LV +R YL R++ R+ SR ++GVPQ
Sbjct: 84 LLAKLDRLGLPDPLVAWLRSYLMGRTYSVRMGPHLSRFLRASSGVPQ 130
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 37.5 bits (83), Expect = 3e-04
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = -3
Query: 545 TXAGXTEERNXXYRPISLLPAIGKXYEXXXXXXXXDFVSANKILIDEQFGFRARHSCVHQ 366
T +G YRPI LL +GK E + + L D Q+GFR S V
Sbjct: 478 TKSGKPPGEPSSYRPICLLSVLGKILERLIQRRLTTHLESTGGLSDPQYGFRKGRSTVDA 537
Query: 365 VHRLTEHXLLGLNRRK 318
+ R+ + + L++++
Sbjct: 538 ITRVMNNGKVALDKKR 553
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 36.3 bits (80), Expect = 8e-04
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = -3
Query: 506 RPISLLPAIGKXYEXXXXXXXXDFVSANKILIDEQFGFRARHSCVHQVHRLTEHXLLGLN 327
RPI LL GK E + L D+QFGFR+R S V + R+ + + +
Sbjct: 475 RPICLLDGAGKGLERIIVQRLNAHIEEVNGLSDDQFGFRSRRSTVDAIQRVVDIVSVARS 534
Query: 326 RRK 318
R +
Sbjct: 535 RNR 537
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 35.5 bits (78), Expect = 0.001
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -2
Query: 252 LIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQ-APPSPRYYSVCI 76
L+ KL +G D ++ + YLSNRS R + S T+GVPQ SP +S+ I
Sbjct: 628 LLAKLSKLGFGDGIISWLSSYLSNRSCRVKTGSYLSEEFFCTSGVPQGCVLSPLLFSLFI 687
Query: 75 S 73
+
Sbjct: 688 N 688
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 35.1 bits (77), Expect = 0.002
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -3
Query: 509 YRPISLLPAIGKXYEXXXXXXXXDFVS--ANKILIDEQFGFRARHSCVHQVHRLTEHXLL 336
YRP+ +L A+GK E + + ++ L D QFGFR S V + R+ E
Sbjct: 550 YRPLCMLDALGKVLERLILNRLNEHLEEPSSPRLSDRQFGFRRGRSTVSAIQRVVEAGRT 609
Query: 335 GLNRRK 318
++ R+
Sbjct: 610 AMSFRR 615
Score = 30.3 bits (65), Expect = 0.052
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -2
Query: 258 QRLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRP--RHVTAGVPQ 112
Q + +L GVP L ++R Y +R + T P RHVTAGVPQ
Sbjct: 641 QSIASRLQAKGVPVGLQRMLRSYFEDRVLYF---DTSEGPVVRHVTAGVPQ 688
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 34.7 bits (76), Expect = 0.002
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = -3
Query: 509 YRPISLLPAIGKXYEXXXXXXXXDFVSANKILIDEQFGFRAR-HSCVHQVHRLTEHXLLG 333
YRP++ L + K D N ++ +EQ G R C QV + + ++G
Sbjct: 534 YRPLTCLSNLNKVLSSVITQKVKDHCDTNNVMTEEQTGRRKNTQGCKDQV--IIDAVIVG 591
Query: 332 LNRRKPIPTGALFFDIAKAFDKVWHN 255
+K + D KA+D V H+
Sbjct: 592 QAAKKQRNLDMAYIDYKKAYDSVPHS 617
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 34.7 bits (76), Expect = 0.002
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -2
Query: 240 LYNMGVPDRLVLIIRDYLSNRSFRY-RVEGTRSRPRHVTAGVPQ 112
L + GVP +L I+RDY +NR Y +G + R VTAGVPQ
Sbjct: 593 LEDKGVPRQLRNILRDYFANRELVYDTADGPVT--RRVTAGVPQ 634
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 33.9 bits (74), Expect = 0.004
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -2
Query: 258 QRLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQ 112
Q + L N GVP L+ II Y R Y RH++AGVPQ
Sbjct: 595 QSIADALRNKGVPSALLNIIGSYFEERKLIYNTSAGPVE-RHISAGVPQ 642
Score = 29.5 bits (63), Expect = 0.091
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = -3
Query: 509 YRPISLLPAIGKXYEXXXXXXXXDFVS--ANKILIDEQFGFRARHSCVHQVHRLTE 348
YRP+S+L A+GK E + + L D Q+GFR S + R+ +
Sbjct: 504 YRPLSMLDALGKVLEQLILNRLNKHLEDPDSPRLSDAQYGFRRGRSTFSAIQRVVD 559
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 33.1 bits (72), Expect = 0.007
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 509 YRPISLLPAIGKXYEXXXXXXXXDFVS--ANKILIDEQFGFRARHSCVHQVHRLTE 348
YRP+ +L A+GK E +F+ + L D Q+GFR S + + R+ E
Sbjct: 490 YRPLCMLDALGKVLERLILNRLHEFLEDPESPRLSDRQYGFRRGCSTIGLIQRVVE 545
Score = 25.4 bits (53), Expect = 1.5
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -1
Query: 598 MTNCIFPAAXKEAXVXGXXKPGKPKNETAXTAP 500
+ N FPAA K + KPGKP + P
Sbjct: 460 LVNGTFPAAWKRQRLVLIPKPGKPSGVSCSYRP 492
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 32.7 bits (71), Expect = 0.010
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = -2
Query: 252 LIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQ 112
L+ KL +G+P LV ++ YL +R++ +++ S+ ++GVPQ
Sbjct: 699 LLAKLDKLGIPSPLVQWLKSYLIHRTYIVKIDKHMSKEIVSSSGVPQ 745
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 32.3 bits (70), Expect = 0.013
Identities = 16/64 (25%), Positives = 27/64 (42%)
Frame = -3
Query: 509 YRPISLLPAIGKXYEXXXXXXXXDFVSANKILIDEQFGFRARHSCVHQVHRLTEHXLLGL 330
+RP+ L+ + K E + L D QFGFR + S V + + E +
Sbjct: 531 FRPLGLVDNLAKVQEMVILDRLTKYTEGPHGLSDRQFGFRKKRSTVDAILAVLEKGIAAF 590
Query: 329 NRRK 318
R++
Sbjct: 591 QRKR 594
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 31.1 bits (67), Expect = 0.030
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -2
Query: 240 LYNMGVPDRLVLIIRDYLSNRSFRYRV-EGTRSRPRHVTAGVPQ 112
L + +P L II +Y NR Y EG R R VTAGVPQ
Sbjct: 571 LQRINIPKYLYDIIGNYFRNRVLLYETNEGNRERV--VTAGVPQ 612
Score = 23.8 bits (49), Expect = 4.5
Identities = 11/51 (21%), Positives = 22/51 (43%)
Frame = -3
Query: 506 RPISLLPAIGKXYEXXXXXXXXDFVSANKILIDEQFGFRARHSCVHQVHRL 354
RPI L+ + K E + + + L + Q+GFR + + ++
Sbjct: 480 RPICLIDGVAKGLERVILHRLNNHIERVQGLSENQYGFRKGRATTDAIEKV 530
>AJ970246-1|CAI96718.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 30.3 bits (65), Expect = 0.052
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -2
Query: 252 LIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSR 142
L+ KL +G+PD LV +R YL R++ R+ SR
Sbjct: 84 LLAKLDRLGLPDPLVAWLRSYLMGRTYSVRMGPHLSR 120
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 30.3 bits (65), Expect = 0.052
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = -3
Query: 536 GXTEERNXXYRPISLLPAIGKXYEXXXXXXXXDFVSANKILIDEQFGFRARHSCVHQVHR 357
G + YRP+ +L A+GK E + + + L D Q+GFR S + +
Sbjct: 503 GKAPGESSSYRPLCMLDALGKVLERLILNRHLEDPDSPQ-LSDAQYGFRRGRSTISAIQS 561
Query: 356 LTE 348
L +
Sbjct: 562 LVD 564
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 29.9 bits (64), Expect = 0.069
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -2
Query: 258 QRLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQ 112
Q + L GVP L I+R Y NR + R +TAGVPQ
Sbjct: 648 QAIATALQMKGVPAGLQRIVRSYFENRELVFET-SDGPVTRSITAGVPQ 695
Score = 29.1 bits (62), Expect = 0.12
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = -3
Query: 518 NXXYRPISLLPAIGKXYEXXXXXXXXDFVS--ANKILIDEQFGFRARHSCVHQVHRLTE 348
N YRP+ +L A+GK E + + A L D Q GFR S + + + E
Sbjct: 554 NGSYRPLCMLDALGKVLEKLILNRLHNHLEDPAAVRLSDRQHGFRRGRSTIGAIRTVIE 612
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 29.9 bits (64), Expect = 0.069
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -2
Query: 240 LYNMGVPDRLVLIIRDYLSNRSFRY-RVEGTRSRPRHVTAGVPQAPP-SPRYYSV 82
L + GVP +L I++DY ++R Y +G + R V+AG PQ PR ++V
Sbjct: 591 LRDKGVPLQLCNILQDYFTDRELTYDTTDGPVT--RRVSAGCPQGSMLGPRLWNV 643
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 29.9 bits (64), Expect = 0.069
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = -3
Query: 509 YRPISLLPAIGKXYEXXXXXXXXDFVSA--NKILIDEQFGFRARHSCVHQVHRLTE 348
YRP+ +L A+GK E + + L D Q+GFR S + + R+ +
Sbjct: 565 YRPLCMLDALGKVLERLILNRLNRHIEQQDSPQLSDAQYGFRRGRSTISAIQRVVD 620
Score = 27.1 bits (57), Expect = 0.48
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -2
Query: 258 QRLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRV-EGTRSRPRHVTAGVPQ 112
Q + L + VP L+ II Y R + EG R H++AGVPQ
Sbjct: 656 QAIADALQSKNVPSYLMKIIGAYFEGRKLLFDTSEGPVER--HISAGVPQ 703
>AJ970250-1|CAI96722.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 29.1 bits (62), Expect = 0.12
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -2
Query: 252 LIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQ 112
L+ KL + P LV ++ YL NR++ +++ S+ ++GVPQ
Sbjct: 84 LLAKLNKVRFPCSLVQWLKSYLINRTYIVKIDKHMSKKIVSSSGVPQ 130
>AJ970243-1|CAI96715.1| 129|Anopheles gambiae putative reverse
transcriptase protein.
Length = 129
Score = 28.3 bits (60), Expect = 0.21
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 252 LIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRS 145
L+ KL +G+ LV R Y+S RS+ +++G S
Sbjct: 82 LLAKLARIGLSTPLVKWFRSYISERSYYVQIDGVSS 117
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 28.3 bits (60), Expect = 0.21
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -3
Query: 509 YRPISLLPAIGKXYEXXXXXXXXDFVS--ANKILIDEQFGFRARHSCVHQVHRLTE 348
+RPI LL GK E +++ + L ++QFGFR S + + ++ +
Sbjct: 499 FRPICLLDNTGKALERLLLNRLNEYIEDPESPQLSEQQFGFRRGRSTLQAIQQVVD 554
Score = 28.3 bits (60), Expect = 0.21
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -2
Query: 258 QRLIYKLYNMGVPDRLVLIIRDYLSNRSFRY-RVEGTRSRPRHVTAGVPQ 112
Q + L GVP +L I++DY ++R Y +G + R V+AGV Q
Sbjct: 590 QSIAEALQAKGVPVQLCRILQDYFADRELEYDTADGPVT--RRVSAGVTQ 637
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 24.6 bits (51), Expect = 2.6
Identities = 18/75 (24%), Positives = 24/75 (32%)
Frame = -3
Query: 602 CYDELHFSRGVXRSGXXRXTXAGXTEERNXXYRPISLLPAIGKXYEXXXXXXXXDFVSAN 423
C+D F R G + RP++L+ K E +
Sbjct: 439 CFDTGFFPIPWKRQKLVLLPKPGKPPDDASALRPLALIDNFAKILEILILNRLVVYTEGE 498
Query: 422 KILIDEQFGFRARHS 378
L D QFGFR S
Sbjct: 499 HGLSDRQFGFRKGRS 513
>AY745225-1|AAU93492.1| 156|Anopheles gambiae cytochrome P450
protein.
Length = 156
Score = 23.4 bits (48), Expect = 6.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 171 RYRVEGTRSRPRHVTAGVPQAP 106
R+ E +SRPRH G + P
Sbjct: 133 RFLEENRKSRPRHAFLGFGEGP 154
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 23.0 bits (47), Expect = 7.9
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 5 RVVDGGVIGEERQMGLRRPGYIIDIQTE**RGEGGACGTPA 127
R+ + G++GE+ MGL P + + + RG G+ G PA
Sbjct: 431 RIGERGLMGEKGDMGLTGPVGLSGRKGD--RGVPGSPGLPA 469
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 23.0 bits (47), Expect = 7.9
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 583 FPAAXKEAXVXGXXKPGKPKNETAXTAP 500
FPA K + KPGKP E++ P
Sbjct: 485 FPAHWKIQRLVLLQKPGKPPGESSSFRP 512
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,715
Number of Sequences: 2352
Number of extensions: 13758
Number of successful extensions: 70
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -