Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0891
         (619 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK057304-1|BAB71417.1|  141|Homo sapiens protein ( Homo sapiens ...    33   0.81 
AM184023-1|CAJ75511.1|  107|Homo sapiens immunoglobulin kappa li...    30   7.5  
AF151808-1|AAD34045.1|  438|Homo sapiens CGI-50 protein protein.       30   7.5  
X51755-9|CAA36054.1|  458|Homo sapiens protein ( Human lambda-im...    29   9.9  
AL136531-3|CAC16177.1|  538|Homo sapiens syntaphilin protein.          29   9.9  
AF187733-1|AAF29901.1|  538|Homo sapiens syntaphilin protein.          29   9.9  
AB002372-1|BAA20829.2|  584|Homo sapiens KIAA0374 protein.             29   9.9  

>AK057304-1|BAB71417.1|  141|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32742 fis, clone TESTI2001352. ).
          Length = 141

 Score = 33.1 bits (72), Expect = 0.81
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = -2

Query: 150 RSRPRHVTAGVPQAPPSPRYYSVCISMIYPGLRRPIWRSSP 28
           + + RHV+A   Q PP+  +YS  +  +Y GL+ P W SSP
Sbjct: 58  KQKSRHVSA---QNPPAAPFYSEQVK-VYHGLQDPTWFSSP 94


>AM184023-1|CAJ75511.1|  107|Homo sapiens immunoglobulin kappa light
           chain protein.
          Length = 107

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = -2

Query: 384 TLVRPSSAPPHGAHXTRAEQAETHSDRSPLLRYSEGVR*SLAQRLIYKLYN--MGVPDR 214
           TL +P+S P       R+ Q+  HSD +  L + +       +RLIYK+ N   GVPDR
Sbjct: 9   TLGQPASIP------CRSSQSLVHSDGNTYLNWFQQRPGQSPRRLIYKVSNRDSGVPDR 61


>AF151808-1|AAD34045.1|  438|Homo sapiens CGI-50 protein protein.
          Length = 438

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
 Frame = +1

Query: 100 RGRSLRDSGCD--VTGPGTRSLDSISERTVRQVVSYDEHEPVWHSHVIQFVYQTLCQTLS 273
           R ++LR  GC   +T     +L ++   + RQV  ++    +WHSHV  F +        
Sbjct: 7   RIKTLRPPGCPHPMTTCSAGTLSAVPCVSPRQVFVFERRFCLWHSHVEMFTHVL------ 60

Query: 274 NAFAISKKRAPVGMGFRLFSPSXMCSV 354
             F IS     V +  RLFS S +  V
Sbjct: 61  -PFVISADTEDVCIVERLFSSSLVAIV 86


>X51755-9|CAA36054.1|  458|Homo sapiens protein ( Human
           lambda-immunoglobulin constant region complex
           (germline). ).
          Length = 458

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 286 ISKKRAPVGMGFRLFSPSXMCSVRRCT*WTHEC 384
           IS  RA VG GFRLF+ +    +   + W H C
Sbjct: 411 ISSCRAAVGPGFRLFALTGSGFLTHTSPWCHHC 443


>AL136531-3|CAC16177.1|  538|Homo sapiens syntaphilin protein.
          Length = 538

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -2

Query: 156 GTRSRPRHVTAGVPQAPPSPRYYSVCISMIYPGLRRPIWRSSPMT-PPSTTR 4
           G  +RP     G+P  PP  R +S+ ++M  PG RR    S   T PP + R
Sbjct: 20  GPPTRPLSSAPGIPPIPPLTRTHSL-MAMSLPGSRRTSAGSRRRTSPPVSVR 70


>AF187733-1|AAF29901.1|  538|Homo sapiens syntaphilin protein.
          Length = 538

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -2

Query: 156 GTRSRPRHVTAGVPQAPPSPRYYSVCISMIYPGLRRPIWRSSPMT-PPSTTR 4
           G  +RP     G+P  PP  R +S+ ++M  PG RR    S   T PP + R
Sbjct: 20  GPPTRPLSSAPGIPPIPPLTRTHSL-MAMSLPGSRRTSAGSRRRTSPPVSVR 70


>AB002372-1|BAA20829.2|  584|Homo sapiens KIAA0374 protein.
          Length = 584

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -2

Query: 156 GTRSRPRHVTAGVPQAPPSPRYYSVCISMIYPGLRRPIWRSSPMT-PPSTTR 4
           G  +RP     G+P  PP  R +S+ ++M  PG RR    S   T PP + R
Sbjct: 66  GPPTRPLSSAPGIPPIPPLTRTHSL-MAMSLPGSRRTSAGSRRRTSPPVSVR 116


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,100,321
Number of Sequences: 237096
Number of extensions: 2016158
Number of successful extensions: 7648
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7647
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)