Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0891
(619 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 25 0.45
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 25 0.78
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.4
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 23 1.8
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 23 1.8
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 23 1.8
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 5.5
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 9.6
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 25.4 bits (53), Expect = 0.45
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -2
Query: 120 VPQA-PPSPRYYSVCISMIYPGLRRPIWRSSPMTP 19
+PQ PP PR S PG RP++ P P
Sbjct: 78 IPQPRPPHPRLRREAESEAEPGNNRPVYIPQPRPP 112
Score = 24.2 bits (50), Expect = 1.0
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -2
Query: 120 VPQA-PPSPRYYSVCISMIYPGLRRPIWRSSPMTP 19
+PQ PP PR PG RPI+ P P
Sbjct: 50 IPQPRPPHPRLRREAEPKAEPGNNRPIYIPQPRPP 84
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 24.6 bits (51), Expect = 0.78
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 196 SYDEHEPVWHSHV 234
SYD EP W +HV
Sbjct: 414 SYDAQEPAWKTHV 426
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 1.4
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -2
Query: 153 TRSRPRHVTAGVPQAPPSPRYYSVCISMIYPGLRRPIWRSSPMT 22
+ R +H GVP+ PP + + C ++ +R W S P++
Sbjct: 1069 SEERRQHTAEGVPEQPP---HDTTCTTLTSQTIRIS-WMSPPLS 1108
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 23.4 bits (48), Expect = 1.8
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -2
Query: 120 VPQA-PPSPRYYSVCISMIYPGLRRPIWRSSPMTP 19
+PQ PP PR PG RP++ P P
Sbjct: 49 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 83
Score = 23.4 bits (48), Expect = 1.8
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -2
Query: 120 VPQA-PPSPRYYSVCISMIYPGLRRPIWRSSPMTP 19
+PQ PP PR PG RP++ P P
Sbjct: 189 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 223
Score = 23.4 bits (48), Expect = 1.8
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -2
Query: 120 VPQA-PPSPRYYSVCISMIYPGLRRPIWRSSPMTP 19
+PQ PP PR PG RP++ P P
Sbjct: 217 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 251
Score = 23.4 bits (48), Expect = 1.8
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -2
Query: 120 VPQA-PPSPRYYSVCISMIYPGLRRPIWRSSPMTP 19
+PQ PP PR PG RP++ P P
Sbjct: 245 IPQPRPPHPRLRREAKPEAKPGNNRPVYIPQPRPP 279
Score = 23.0 bits (47), Expect = 2.4
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = -2
Query: 180 RSFRYRVEGTRSRPRHVTAGVPQAPPSPRYYSVCISMIYPGLRRPIWRSSPMTP 19
R E +RP +++ P+ PP PR PG RP++ P P
Sbjct: 89 REAELEAEPGNNRPVYISQ--PR-PPHPRLRREAEPEAEPGNNRPVYIPQPRPP 139
Score = 23.0 bits (47), Expect = 2.4
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = -2
Query: 180 RSFRYRVEGTRSRPRHVTAGVPQAPPSPRYYSVCISMIYPGLRRPIWRSSPMTP 19
R E +RP +++ P+ PP PR PG RP++ P P
Sbjct: 145 REAELEAEPGNNRPVYISQ--PR-PPHPRLRREAEPEAEPGNNRPVYIPQPRPP 195
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 23.4 bits (48), Expect = 1.8
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -2
Query: 120 VPQA-PPSPRYYSVCISMIYPGLRRPIWRSSPMTP 19
+PQ PP PR PG RP++ P P
Sbjct: 50 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 84
Score = 23.4 bits (48), Expect = 1.8
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -2
Query: 120 VPQA-PPSPRYYSVCISMIYPGLRRPIWRSSPMTP 19
+PQ PP PR PG RP++ P P
Sbjct: 78 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 112
Score = 23.4 bits (48), Expect = 1.8
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -2
Query: 120 VPQA-PPSPRYYSVCISMIYPGLRRPIWRSSPMTP 19
+PQ PP PR PG RP++ P P
Sbjct: 106 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 140
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 23.4 bits (48), Expect = 1.8
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -2
Query: 120 VPQA-PPSPRYYSVCISMIYPGLRRPIWRSSPMTP 19
+PQ PP PR PG RP++ P P
Sbjct: 21 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 55
Score = 23.4 bits (48), Expect = 1.8
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -2
Query: 120 VPQA-PPSPRYYSVCISMIYPGLRRPIWRSSPMTP 19
+PQ PP PR PG RP++ P P
Sbjct: 49 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 83
Score = 23.4 bits (48), Expect = 1.8
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -2
Query: 120 VPQA-PPSPRYYSVCISMIYPGLRRPIWRSSPMTP 19
+PQ PP PR PG RP++ P P
Sbjct: 77 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 111
Score = 23.4 bits (48), Expect = 1.8
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -2
Query: 120 VPQA-PPSPRYYSVCISMIYPGLRRPIWRSSPMTP 19
+PQ PP PR PG RP++ P P
Sbjct: 105 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 139
Score = 23.4 bits (48), Expect = 1.8
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -2
Query: 120 VPQA-PPSPRYYSVCISMIYPGLRRPIWRSSPMTP 19
+PQ PP PR PG RP++ P P
Sbjct: 133 IPQPRPPHPRLRREAKPEAEPGNNRPVYIPQPRPP 167
Score = 23.4 bits (48), Expect = 1.8
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -2
Query: 120 VPQA-PPSPRYYSVCISMIYPGLRRPIWRSSPMTP 19
+PQ PP PR PG RP++ P P
Sbjct: 161 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 195
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = -2
Query: 117 PQAPPSPRYYSVCISMIYPGLR 52
P PP P S C+ Y L+
Sbjct: 180 PPEPPVPTVTSACVGSAYTPLK 201
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.0 bits (42), Expect = 9.6
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 5/30 (16%)
Frame = +2
Query: 263 RLYRTPSLYRRRG-----LLSEWVSACSAL 337
+LYR SL +RRG LLS ++ +AL
Sbjct: 34 KLYRASSLQQRRGGLEYFLLSAFLFGANAL 63
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,344
Number of Sequences: 438
Number of extensions: 4050
Number of successful extensions: 23
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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