Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0890
         (829 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    49   5e-08
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    44   1e-06
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.2  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   9.0  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 48.8 bits (111), Expect = 5e-08
 Identities = 42/176 (23%), Positives = 72/176 (40%)
 Frame = +3

Query: 285 LPRGETFVHTNELQMEEAVKVFRVLYYAKDFDVFMRTACWMRERINGGMFVYAFTAACFH 464
           L R E F        + A K+ R+   A+  D  +  A + R+R+N  +F YAF+ A  H
Sbjct: 74  LGRHENFSLFIPKHRKVAGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLH 133

Query: 465 RTDCKGLYLPAPYEIIPTSSLTAMSSVKPL**R*LKPPRTRSSGNTTASRLLTTIW**LT 644
           R D + L LP+   + P   + +               R R   +       T I     
Sbjct: 134 RPDTQNLDLPSFIHVFPDKYVDSQVFA-----------RAREEAHIVPEGSRTPI---EI 179

Query: 645 GVRESAALLSQNDVMSYFMEDVDLNTYMY*LHMNYPFXMTTTLTA*NKGASLARFM 812
               +A+ L +   ++Y+ ED+ LN + +  H+ YPF     +   N+   +  +M
Sbjct: 180 PQDFTASDLDEEHRVAYWREDIGLNLHHWHWHLVYPFEGAREIVDKNRRGEIFYYM 235


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 44.0 bits (99), Expect = 1e-06
 Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
 Frame = +3

Query: 369 KDFDVFMRTACWMRERINGGMFVYAFTAACFHRTDCKGLYLPAPYEIIPTSSLTAMSSVK 548
           ++ D  +  A + R+R+N  +F YA + A  HR D + + LP+  E  P   + +    K
Sbjct: 102 RNVDDLLSVAVYARDRVNPYLFSYALSVAILHRQDTQDIDLPSFIESFPDKYVDSKVFAK 161

Query: 549 PL**R*LKPPRTRSSGNTTASRLLTTIW**LTGVRE-SAALLSQNDVMSYFMEDVDLNTY 725
                     R  ++     SR    I       R+ +A+ L +   ++YF ED+ +N +
Sbjct: 162 ---------AREEATVVPEGSRTPIEI------PRDYTASDLEEEHRLAYFREDLGINLH 206

Query: 726 MY*LHMNYPFXMTTTLTA*NKGASLARFM 812
            +  H+ YPF     + A N+   L  +M
Sbjct: 207 HWHWHLVYPFEAAREVVAKNRRGELFYYM 235



 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 595 PEDRVLGGFSHLHHKGFTDDMAVNEE 518
           P   V   F+HL H+ FT  + VN +
Sbjct: 466 PRGSVFVRFTHLQHQPFTYKITVNNQ 491


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 437 DEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFF 330
           D   ++ P + P R P +N + L  +E S +  G F
Sbjct: 125 DMETTLTPCASPNRKPDDNQDHLRRLEMSLEKSGLF 160


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 112 DMKMKELCIMKLLDHI 159
           D K+  LC+  L+DH+
Sbjct: 442 DEKLNALCMTWLMDHV 457


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,140
Number of Sequences: 336
Number of extensions: 3430
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)