Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0889
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.3  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   3.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   3.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   3.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   5.4  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   5.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   7.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   7.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   9.5  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = +3

Query: 399 AYRRRSSRNENSPFSSLKGLTVNINEFISSTFNL 500
           +++RR    + SP S L  +  +++ FIS+ + +
Sbjct: 36  SFKRRIFYQDESPISRLVYIGTDLSYFISNVYQI 69


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = +3

Query: 333 STRGCVEKEELVGLCVTHVNSPAYRRRSSRNENSPFSSLKGLTVNIN 473
           S +GC  +    GLC +H   P        N N+P ++      N N
Sbjct: 100 SCQGC--EMPSAGLCGSHDEIPDISSTRGNNNNTPSATNNNTNFNNN 144


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = +3

Query: 333 STRGCVEKEELVGLCVTHVNSPAYRRRSSRNENSPFSSLKGLTVNIN 473
           S +GC  +    GLC +H   P        N N+P ++      N N
Sbjct: 48  SCQGC--EMPSAGLCGSHDEIPDISSTRGNNNNTPSATNNNTNFNNN 92


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = +3

Query: 333 STRGCVEKEELVGLCVTHVNSPAYRRRSSRNENSPFSSLKGLTVNIN 473
           S +GC  +    GLC +H   P        N N+P ++      N N
Sbjct: 231 SCQGC--EMPSAGLCGSHDEIPDISSTRGNNNNTPSATNNNTNFNNN 275


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -3

Query: 439  NGLFSLRELRRRYAGLFTCVTHRPTNSSFSTHPLV 335
            +G   +R++ R  AG ++C           TH L+
Sbjct: 1358 DGSLFIRDVSRNNAGEYSCHVENDYGQDSVTHQLI 1392


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 487 ELMNSLMLTVXPLRELNGLFSLREL 413
           +L N   + V  +RE+NG+F+ + L
Sbjct: 135 KLFNLHKILVKVVREINGIFAFQVL 159


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -3

Query: 271 RDSGRVTAPGMVHTWSLHRDGGICCSSTSHIHHKLFC 161
           ++  R   P ++    L  DG + C   + I   LFC
Sbjct: 100 KNKERKVKPLLITDEPLCPDGSLACGDGNCIERGLFC 136


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 5/18 (27%), Positives = 12/18 (66%)
 Frame = -2

Query: 104 PQTNTYHTDIKRFYRPIF 51
           P+   YH +I+++Y  ++
Sbjct: 317 PEEQVYHLEIEKYYNILY 334


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 247 PGMVHTWSLHRDGG 206
           PG    WSLH D G
Sbjct: 208 PGKGSFWSLHPDSG 221


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +2

Query: 500 ETCSQPYPAPPPP 538
           E C  P   PPPP
Sbjct: 205 EDCDVPSTIPPPP 217


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,512
Number of Sequences: 336
Number of extensions: 3808
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)