Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0889
(687 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11996| Best HMM Match : FYVE (HMM E-Value=0.004) 40 0.002
SB_27781| Best HMM Match : Ank (HMM E-Value=0) 32 0.38
SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 0.41
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.62
SB_9385| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 27 0.88
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 27 0.90
SB_51535| Best HMM Match : W2 (HMM E-Value=4e-29) 31 1.2
SB_59619| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_2108| Best HMM Match : DUF702 (HMM E-Value=4.7) 31 1.2
SB_52187| Best HMM Match : HNF-1A_C (HMM E-Value=1.8) 30 1.5
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 30 1.5
SB_4008| Best HMM Match : Fer4 (HMM E-Value=0.16) 30 1.5
SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31) 30 1.5
SB_36751| Best HMM Match : Exo_endo_phos (HMM E-Value=2e-12) 30 2.0
SB_28123| Best HMM Match : zf-NF-X1 (HMM E-Value=0.24) 30 2.0
SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_21624| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_27160| Best HMM Match : GtrA (HMM E-Value=9.3) 29 2.7
SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_30900| Best HMM Match : Extensin_2 (HMM E-Value=0.17) 29 3.5
SB_57745| Best HMM Match : Extensin_2 (HMM E-Value=0.69) 29 4.7
SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17) 29 4.7
SB_26370| Best HMM Match : Drf_FH1 (HMM E-Value=5.2) 29 4.7
SB_50357| Best HMM Match : Toxin_8 (HMM E-Value=2.4) 29 4.7
SB_48617| Best HMM Match : Drf_FH1 (HMM E-Value=3.7) 29 4.7
SB_36929| Best HMM Match : rve (HMM E-Value=1.2e-16) 29 4.7
SB_18590| Best HMM Match : FYVE (HMM E-Value=8.8e-29) 29 4.7
SB_2890| Best HMM Match : rve (HMM E-Value=0.044) 29 4.7
SB_33554| Best HMM Match : Sushi (HMM E-Value=0.00055) 28 6.2
SB_23619| Best HMM Match : TPR_1 (HMM E-Value=5.6) 28 6.2
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_12256| Best HMM Match : TP1 (HMM E-Value=8.5) 28 6.2
SB_55248| Best HMM Match : Adeno_E1A (HMM E-Value=7.5) 28 8.1
SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_41022| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_39051| Best HMM Match : Gal_Lectin (HMM E-Value=2.5e-21) 28 8.1
SB_10582| Best HMM Match : DUF1168 (HMM E-Value=1.8) 28 8.1
SB_48173| Best HMM Match : WD40 (HMM E-Value=7.3e-18) 28 8.1
SB_42552| Best HMM Match : RhoGAP (HMM E-Value=0) 28 8.1
SB_33496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_766| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_11996| Best HMM Match : FYVE (HMM E-Value=0.004)
Length = 610
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = +1
Query: 115 KMPCESCAVQFSVFRHKRVCGECERYYCSRCLRRG-----GGSMCAPCRVLS 255
+M C C+V F++F+ K C C++ CS C +G C CR L+
Sbjct: 63 EMVCYLCSVNFTLFKRKSTCRGCKKTLCSNCFTQGLNARDQSPRCITCRALA 114
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 234 CTMPGAVTRPLSRAN-IAHLKVRDLQCFLHRQNVSTRGCVEKEELVGLCVTHVNSPAY 404
C A+ P + + + +LK++DLQ FL +N+ C EK +L+ L + + Y
Sbjct: 107 CITCRALAAPSTHKDFLQYLKIKDLQDFLRLKNIPMSQCKEKRDLIELILQYSQPRRY 164
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 279 IAHLKVRDLQCFLHRQNVSTRGCVEKEELV 368
+ +L V++L+ L V +GCVEKEEL+
Sbjct: 228 VDNLSVKELKHILTANFVDFKGCVEKEELL 257
>SB_27781| Best HMM Match : Ank (HMM E-Value=0)
Length = 485
Score = 32.3 bits (70), Expect = 0.38
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 124 CESCAVQFSVFRHKRVCGECERYYCSRC 207
C C ++FS+ K C C R C++C
Sbjct: 429 CHECGMKFSIKNRKHHCRHCGRLLCAKC 456
>SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 32.3 bits (70), Expect = 0.38
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 103 GRECKMPCESCAVQFSVFRHKRVCGECERYYCSRCL 210
G+EC + C +C + H C +C RY+C CL
Sbjct: 90 GKECDIKC-ACKNRLIAIAH---CFDCSRYFCENCL 121
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 25.8 bits (54), Expect(2) = 0.41
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Frame = +2
Query: 515 PYPAPPPPTRSCHNNSH--SHV 574
P P PPPP + H+ H SHV
Sbjct: 112 PPPPPPPPPITLHHEQHVVSHV 133
Score = 25.0 bits (52), Expect(2) = 0.41
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 497 PETCSQPYPAPPPP 538
P C+ P P PPPP
Sbjct: 97 PACCAPPPPPPPPP 110
Score = 24.6 bits (51), Expect(2) = 5.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 497 PETCSQPYPAPPPP 538
P C P P PPPP
Sbjct: 96 PPACCAPPPPPPPP 109
Score = 22.2 bits (45), Expect(2) = 5.6
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +2
Query: 515 PYPAPPPPTRSCHNNSH 565
P P PPPP C H
Sbjct: 138 PPPPPPPPPAPCMPPCH 154
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 28.7 bits (61), Expect(2) = 0.62
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = +2
Query: 515 PYPA-PPPPTRSCHNNSHSHVPGQPTSDRLTTSGSRXPGXXPPRSERFXTTPG 670
P P+ PPPP S S PG P TS PP + PG
Sbjct: 701 PQPSTPPPPPPSTPPVQQSGAPGSPAGSPSGTSAGNPQQQPPPPGQLPGQQPG 753
Score = 21.4 bits (43), Expect(2) = 0.62
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 485 LDVQPETCSQPYPAPPPP 538
L + +T P P PPPP
Sbjct: 674 LPIPIQTMVPPPPPPPPP 691
>SB_9385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 31.1 bits (67), Expect = 0.87
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 124 CESCAVQFSVFRHKRVCGECERYYCSRC 207
C C+ +F+ R K C +C R C++C
Sbjct: 48 CPLCSQKFTQIRRKHHCRQCGRVLCNKC 75
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 27.1 bits (57), Expect(2) = 0.88
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +2
Query: 515 PYPAPPPPTRSCHNNSHSHVPGQPTSDRLTTSGSRXP 625
P APPPP R N G P S+ TT G P
Sbjct: 266 PKNAPPPPKRGSSNPPPPPTRG-PPSNSFTTQGPPLP 301
Score = 22.6 bits (46), Expect(2) = 0.88
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 497 PETCSQPYPAPPP 535
P S+P PAPPP
Sbjct: 233 PTGSSRPLPAPPP 245
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 27.1 bits (57), Expect(2) = 0.90
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +2
Query: 515 PYPAPPPPTRSCHNNSHSHVPGQPTSDRLTTSGSRXP 625
P APPPP R N G P S+ TT G P
Sbjct: 178 PKNAPPPPKRGSSNPPPPPTRG-PPSNSFTTQGPPLP 213
Score = 22.6 bits (46), Expect(2) = 0.90
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 497 PETCSQPYPAPPP 535
P S+P PAPPP
Sbjct: 145 PTGSSRPLPAPPP 157
>SB_51535| Best HMM Match : W2 (HMM E-Value=4e-29)
Length = 770
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +2
Query: 530 PPPTRSCHNNSHSHVPGQPTSDRLTTSGSRXPGXXPPRSERFXT 661
PP T S ++ H H G P S R GSR P PPR + T
Sbjct: 351 PPLTGSPPSSRHPHYGGSPPSSRNQQYGSRRP---PPRPIQLNT 391
>SB_59619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 448
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +2
Query: 407 ASELSQ*EQSIQFS*RXNSQHQ*VHKLDVQPETCSQPYPAPPPPTR--SCHNNSHSHVPG 580
AS S+ EQ + S S H + K+ P+ CS P P PP R H + S G
Sbjct: 213 ASTDSEPEQGRRISQTTRSAHLSLRKMTSMPDGCSGPKPRPPLKKRFSEIHRRTSSDSLG 272
Query: 581 QPTSD 595
T++
Sbjct: 273 VSTAN 277
>SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1457
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 124 CESCAVQFSVFRHKRVCGECERYYCSRC 207
C SC +FS K C C R +C C
Sbjct: 947 CTSCKAEFSFLLRKHHCRMCGRIFCHSC 974
>SB_2108| Best HMM Match : DUF702 (HMM E-Value=4.7)
Length = 297
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = +2
Query: 503 TCSQPYPAPPPP--TRSCHNNSH 565
+C Q APPPP +SCH+N+H
Sbjct: 271 SCPQRIAAPPPPYALQSCHSNAH 293
>SB_52187| Best HMM Match : HNF-1A_C (HMM E-Value=1.8)
Length = 193
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Frame = +2
Query: 512 QPYPAPPPPTRSCHNNSHSHVPGQPTSDRLTTSG------SRXPGXXPPRSERFXTT 664
QP+ P P + H S++H+P Q S ++T+ ++ P PP R +T
Sbjct: 91 QPFTKPSAPLQYVHRESNTHLPSQRISLPVSTNAYLHYHQTKKPSTKPPHHTRKHST 147
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +1
Query: 109 ECKMPCESCAVQFSVFRHKR-VCGECERYYC---SRCLRRGGGSMC 234
EC M +C+ + SV + K C C+ C S+C RR GG+ C
Sbjct: 908 ECVMRALACSRKESVNKTKDGACDPCQLVSCRFYSKCQRRRGGAQC 953
>SB_4008| Best HMM Match : Fer4 (HMM E-Value=0.16)
Length = 444
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 312 FLHRQNVSTRGCVEKEELVGLCVTHVNSPAYRRR 413
F H N + +GC+ + VG C VN P +R R
Sbjct: 84 FSHEVNHAMQGCLACKSCVGQCPIKVNVPEFRSR 117
>SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31)
Length = 892
Score = 30.3 bits (65), Expect = 1.5
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 124 CESCAVQFSVFRHKRVCGECERYYCSRC 207
C C V+F F + C C + +C +C
Sbjct: 233 CHMCRVKFGTFIRQHHCRNCGQVFCKKC 260
>SB_36751| Best HMM Match : Exo_endo_phos (HMM E-Value=2e-12)
Length = 906
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 586 WLPRNVRVTIVVTATCRRWWCWIWL 512
WL V +VVT+ C +W+C WL
Sbjct: 585 WLSPVVLSPVVVTSGCHQWFCHQWL 609
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 586 WLPRNVRVTIVVTATCRRWWCWIWL 512
WL R V + VT+ C W+C WL
Sbjct: 669 WLSRVVVTSGFVTSGCHEWFCHQWL 693
>SB_28123| Best HMM Match : zf-NF-X1 (HMM E-Value=0.24)
Length = 453
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +1
Query: 100 CGRECKMPC-ESCAVQFSVFRHKRVCGE-CERYYCSRCLRRGGGSMCAPCRVLSPVHYPE 273
CG C +PC E CA + ++ ++CGE C+R C + PC L PE
Sbjct: 68 CGEPC-VPCAEPCAWKCRHYKCSKLCGEICDRPRCDKPCPYKIEKCKHPCIGLCGEKCPE 126
Query: 274 QTSLTSK 294
+ + K
Sbjct: 127 KCRICDK 133
>SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2077
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 100 CGRECKMPC-ESCAVQFSVFRHKRVCGE-CERYYCSR 204
CG C +PC E CA + ++ ++CGE C+R C +
Sbjct: 1963 CGEPC-VPCAEPCAWECRHYKCNKLCGEMCDRPRCDK 1998
>SB_21624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 29.5 bits (63), Expect = 2.7
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 568 RVTIVVTATCRRWWCW 521
++T++VT CR WW W
Sbjct: 129 KLTLIVTNLCRYWWTW 144
>SB_27160| Best HMM Match : GtrA (HMM E-Value=9.3)
Length = 398
Score = 29.5 bits (63), Expect = 2.7
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 568 RVTIVVTATCRRWWCW 521
++T++VT CR WW W
Sbjct: 376 KLTLIVTNLCRYWWTW 391
>SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Frame = +1
Query: 124 CESCAVQFSV----FRHKRVCGECERYYCSRC 207
CE+C QF V RHKR+ C+ + C C
Sbjct: 188 CETCGKQFRVTSDLIRHKRIHTGCKPFLCEVC 219
>SB_30900| Best HMM Match : Extensin_2 (HMM E-Value=0.17)
Length = 473
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 8/59 (13%)
Frame = +2
Query: 488 DVQPETCSQPYPAPPPPTRSCHNNSHSH----VPGQPTSDRLTTS----GSRXPGXXPP 640
D + C P P PP P + + H H P PT+ +T R P PP
Sbjct: 332 DTRHHHCRHPAPPPPTPGTTTADTRHHHRRHPAPSPPTTGTITADTRHHHRRHPAPSPP 390
>SB_57745| Best HMM Match : Extensin_2 (HMM E-Value=0.69)
Length = 472
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Frame = +2
Query: 497 PETCSQPYPAPPPPTRSCHNNS---HSHVPGQPTS 592
P TC YP PP P C HS VP P++
Sbjct: 256 PSTCIPLYPVPPVPAFHCTQYPQYLHSIVPSTPST 290
>SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17)
Length = 1590
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = +2
Query: 500 ETCSQPYPAPPPPTRSCHNNSH----SHVPGQPTSDRLTTS 610
+T S AP PP+++CH+ + + PG PT D T +
Sbjct: 1494 KTPSMAPDAPSPPSQTCHHTNRTATPATTPGVPTPDLATAA 1534
>SB_26370| Best HMM Match : Drf_FH1 (HMM E-Value=5.2)
Length = 190
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Frame = +2
Query: 497 PETCSQPYPAPPPPTRSCHNNS---HSHVPGQPTS 592
P TC YP PP P C HS VP P++
Sbjct: 86 PSTCIPLYPVPPVPAFHCTQYPQYLHSIVPSAPST 120
>SB_50357| Best HMM Match : Toxin_8 (HMM E-Value=2.4)
Length = 304
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +2
Query: 458 NSQHQ*VHKLDVQPETCSQPYPAPPPPTRSCHNNSHSHVPGQPTSDRLTTSGSR 619
N+ + + +L ++ E+C++ + P PP+ HS P +PT + +TS +R
Sbjct: 99 NNNSKILQQLSLEKESCNKSF-TPRPPSTPPSPRKHSR-PCRPTRSQSSTSRAR 150
>SB_48617| Best HMM Match : Drf_FH1 (HMM E-Value=3.7)
Length = 477
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = +2
Query: 500 ETCSQPYPAPPPPTRSCHNNSH----SHVPGQPTSDRLTTS 610
+T S AP PP+++CH+ + + PG PT D T +
Sbjct: 204 KTPSMAPAAPSPPSQTCHHTNRTATPATTPGVPTPDLATAA 244
>SB_36929| Best HMM Match : rve (HMM E-Value=1.2e-16)
Length = 913
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = +2
Query: 500 ETCSQPYPAPPPPTRSCHNNSH----SHVPGQPTSDRLTTS 610
+T S AP PP+++CH+ + + PG PT D T +
Sbjct: 828 KTPSMAPAAPSPPSQTCHHTNRTATPATTPGVPTPDLATAA 868
>SB_18590| Best HMM Match : FYVE (HMM E-Value=8.8e-29)
Length = 551
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 124 CESCAVQFSVFRHKRVCGECERYYCSRC 207
C SC FS+ K C C +CS C
Sbjct: 361 CNSCDKVFSITLRKHHCRNCGLIFCSDC 388
>SB_2890| Best HMM Match : rve (HMM E-Value=0.044)
Length = 336
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = +2
Query: 500 ETCSQPYPAPPPPTRSCHNNSH----SHVPGQPTSDRLTTS 610
+T S AP PP+++CH+ + + PG PT D T +
Sbjct: 240 KTPSMAPAAPSPPSQTCHHTNRTATPATTPGVPTPDLATAA 280
>SB_33554| Best HMM Match : Sushi (HMM E-Value=0.00055)
Length = 685
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +2
Query: 89 KCLFVDVNARCRAKAVRYSSACLDTKEFVVNVRGTTAADASVAVEAPCVHHAGC-CHPST 265
KC + N R R + +Y+ +DT+++ T D + V AP HA P
Sbjct: 451 KCTYRQANTRSRTQTYKYTCTQIDTRKYTY-----THPDTHMHVHAP--RHANTRGAPRH 503
Query: 266 IPSKHRSPQSSRPSVLPTSSKRIHQRMC 349
++ R+ P + +H R C
Sbjct: 504 AYARTRTQTHKYMYTHPDTQMHVHTRKC 531
>SB_23619| Best HMM Match : TPR_1 (HMM E-Value=5.6)
Length = 71
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 438 MDCSHCESSDAGMQDYLHVLHTDPPTLPFR 349
MD H + + G +DYL LH DP L R
Sbjct: 34 MDFGHEQGNVLGRRDYLKALHLDPLCLSAR 63
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 521 PAPPPPTRSCHNNSHSHVPGQPTSDRLTTSGS 616
P+P P + ++S S P PTS L T GS
Sbjct: 3049 PSPESPNQESEDDSVSPAPPWPTSHSLNTMGS 3080
>SB_12256| Best HMM Match : TP1 (HMM E-Value=8.5)
Length = 156
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 375 CVTHVNSPAYRRRS-SRNENSPFSSLKGLTVNINEFI 482
C + P RR S SRN NSP +++ L ++ + FI
Sbjct: 117 CSKQLGRPRIRRESASRNYNSPLQAMEILNLSCSRFI 153
>SB_55248| Best HMM Match : Adeno_E1A (HMM E-Value=7.5)
Length = 198
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 375 TDPPTLPFRHILWWIRFDDVG 313
T PP P RH L W RF G
Sbjct: 160 TPPPLRPLRHNLLWSRFSSYG 180
>SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1222
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Frame = +2
Query: 524 APPPPTRSCHNNSH----SHVPGQPTSDRLTTS 610
AP PP+++CH+ + + PG PT D T +
Sbjct: 1134 APSPPSQTCHHTNRTATPATTPGVPTPDLATAA 1166
>SB_41022| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 580
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +2
Query: 506 CSQPYPAPPP-PTRSCHNNSHSHVPGQPTSDRLT---TSGSRXPGXXPPRSERFXT 661
C P P PPP TR C+ N + P +D T T+G+R PR+ T
Sbjct: 308 CEPPVPDPPPSETRECNRNP-CNPPTTLGTDHTTPSNTTGNRTKVPTTPRTSEGET 362
>SB_39051| Best HMM Match : Gal_Lectin (HMM E-Value=2.5e-21)
Length = 1405
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = +2
Query: 503 TCSQPYPAPPPPT-RSCHNNSHSHVPGQPTSDRLTTSGSRXPGXXPP 640
+C Q APPP +S H+N+H P P PP
Sbjct: 487 SCPQRIAAPPPHALQSYHSNAHQRTTRDPRGPYRNPESMPHPRQYPP 533
>SB_10582| Best HMM Match : DUF1168 (HMM E-Value=1.8)
Length = 454
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +2
Query: 515 PYPAPPPPTRSCHNNSHSHVPGQPTSDRLT--TSGSRXPGXXPPRSERFXTTPG 670
P PA PP S++ +P +P S + T G P PPR +R +PG
Sbjct: 112 PPPADVPPV-CLPVVSNTSLPNEPQSTEVVKNTVGDPPPPVAPPRRKRKKKSPG 164
>SB_48173| Best HMM Match : WD40 (HMM E-Value=7.3e-18)
Length = 659
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +2
Query: 494 QPETCSQPYPAPPPPTRSCHNNSHSHVPGQPTSDRLTTSGSRXP-GXXPPRSERFXTTPG 670
QP++ P P P R + + S +P S ++ T P PP++E F G
Sbjct: 295 QPQSTPAPATTGPSPVRLVGSRAMSEIPPPIGSVKIPTKTEAAPAASSPPKNEPFEDALG 354
>SB_42552| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 945
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 191 TTAADASVAVEAPCVHHAGCCHPSTIPSKHRSPQSSRPSVLPTSS 325
TTA+ +++ V H+G HPS S S+ V+PT++
Sbjct: 712 TTASPSAIGVVHSSAMHSGVTHPSVTHSGVTPTGSTTIGVIPTAT 756
>SB_33496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1082
Score = 27.9 bits (59), Expect = 8.1
Identities = 24/83 (28%), Positives = 36/83 (43%)
Frame = +2
Query: 404 PASELSQ*EQSIQFS*RXNSQHQ*VHKLDVQPETCSQPYPAPPPPTRSCHNNSHSHVPGQ 583
P E S+ +QS S NS K+ V S P+ +S HN+SH + PG+
Sbjct: 881 PFVEASRCDQSQHNSSHGNSPG----KVQVNTSGQSSPFVEASRGDQSQHNSSHGNSPGK 936
Query: 584 PTSDRLTTSGSRXPGXXPPRSER 652
++ TSG P R ++
Sbjct: 937 A---QVNTSGQSSPFVEASRGDQ 956
>SB_766| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1704
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 467 HQ*VHKLDVQPETCSQPYPAPPPPTRSCHNNSHSHV 574
H+ H+L +P C PYP P + N+ +H+
Sbjct: 1008 HERKHELQDKPYKCECPYPRRPETRENYFNSLLAHI 1043
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,464,983
Number of Sequences: 59808
Number of extensions: 505376
Number of successful extensions: 2297
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2262
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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