Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0889
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016683-8|AAM97998.1| 480|Caenorhabditis elegans Hypothetical ... 33 0.19
U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte grow... 32 0.44
Z81495-11|CAN99657.1| 339|Caenorhabditis elegans Hypothetical p... 30 1.3
Z81495-10|CAD57692.1| 480|Caenorhabditis elegans Hypothetical p... 30 1.3
Z81495-9|CAB04064.1| 389|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z74026-4|CAA98416.5| 774|Caenorhabditis elegans Hypothetical pr... 30 1.3
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 30 1.3
AL032644-11|CAN99705.1| 339|Caenorhabditis elegans Hypothetical... 30 1.3
AL032644-10|CAD57710.1| 480|Caenorhabditis elegans Hypothetical... 30 1.3
AL032644-9|CAA21673.1| 389|Caenorhabditis elegans Hypothetical ... 30 1.3
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 30 1.3
Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z92831-2|CAB07368.2| 861|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z49125-6|CAA88937.2| 776|Caenorhabditis elegans Hypothetical pr... 30 1.8
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 30 1.8
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 30 1.8
AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical ... 30 1.8
Z75547-11|CAA99905.4| 394|Caenorhabditis elegans Hypothetical p... 29 2.4
Z74033-9|CAN99687.1| 228|Caenorhabditis elegans Hypothetical pr... 29 2.4
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 29 2.4
AF068713-12|AAC17802.1| 139|Caenorhabditis elegans Ground-like ... 29 2.4
Z81110-9|CAB03261.2| 353|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81094-8|CAB03155.2| 353|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical pr... 29 4.1
U41271-3|AAP31439.1| 577|Caenorhabditis elegans Hypothetical pr... 29 4.1
U41271-2|AAA82444.3| 713|Caenorhabditis elegans Hypothetical pr... 29 4.1
U13644-5|AAB52681.1| 451|Caenorhabditis elegans Hypothetical pr... 29 4.1
U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab e... 29 4.1
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 29 4.1
Z83228-9|CAB05737.2| 539|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z66498-5|CAA91294.2| 513|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z54327-14|CAA91124.2| 513|Caenorhabditis elegans Hypothetical p... 28 5.4
U67079-1|AAB40716.1| 539|Caenorhabditis elegans C2-HC type zinc... 28 5.4
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 5.4
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 5.4
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 24 6.0
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z37983-5|CAA86059.2| 405|Caenorhabditis elegans Hypothetical pr... 28 7.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 7.2
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical ... 28 7.2
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 28 7.2
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z49125-7|CAN99660.1| 717|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical ... 27 9.5
AC025715-5|AAP13755.1| 281|Caenorhabditis elegans Hypothetical ... 27 9.5
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 25 9.8
>AF016683-8|AAM97998.1| 480|Caenorhabditis elegans Hypothetical
protein K09F6.10 protein.
Length = 480
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 124 CESCAVQFSVFRHKRVCG-ECERYYCSRCLRRGGGSMCAPCRVL 252
C C Q+S RH + CG +C R + C + G G +C C ++
Sbjct: 333 CFKCN-QYSGRRHYQTCGAKCRRCGVTNCEKNGVGKICEKCNIV 375
>U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte growth
factor-regulatedtk substrate (hrs) family protein 1
protein.
Length = 729
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 124 CESCAVQFSVFRHKRVCGECERYYCSRCLRR 216
C C FSVF K C C + +C +C R
Sbjct: 163 CYRCRSVFSVFTRKHHCRACGQIFCDKCSSR 193
>Z81495-11|CAN99657.1| 339|Caenorhabditis elegans Hypothetical
protein Y51H1A.1c protein.
Length = 339
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 124 CESC--AVQFSVFRHKRVCGECERYYCSRCLRRGGGSMCAPCRVL 252
C C + S F C +YYC+ C+ + GG + P RV+
Sbjct: 101 CAMCRKTIGGSTFSKFETCAIDSKYYCTECM-KSGGKVSIPARVV 144
>Z81495-10|CAD57692.1| 480|Caenorhabditis elegans Hypothetical
protein Y51H1A.1b protein.
Length = 480
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 124 CESC--AVQFSVFRHKRVCGECERYYCSRCLRRGGGSMCAPCRVL 252
C C + S F C +YYC+ C+ + GG + P RV+
Sbjct: 242 CAMCRKTIGGSTFSKFETCAIDSKYYCTECM-KSGGKVSIPARVV 285
>Z81495-9|CAB04064.1| 389|Caenorhabditis elegans Hypothetical
protein Y51H1A.1a protein.
Length = 389
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 124 CESC--AVQFSVFRHKRVCGECERYYCSRCLRRGGGSMCAPCRVL 252
C C + S F C +YYC+ C+ + GG + P RV+
Sbjct: 151 CAMCRKTIGGSTFSKFETCAIDSKYYCTECM-KSGGKVSIPARVV 194
>Z74026-4|CAA98416.5| 774|Caenorhabditis elegans Hypothetical
protein B0240.2 protein.
Length = 774
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 94 FVCGRECKMPCESCAVQFSVFRHKRVCGECERYYCSRC 207
FVC +C + CE ++ S + RVC C +YC C
Sbjct: 676 FVCS-DC-VKCEKYDMKVSDQENVRVCVHCSAFYCINC 711
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 509 SQPYPA-PPPPTRSCHNNSHSHVPGQPTSDRLTTSGSRXPGXXPPRSERFXTTPGG 673
S P+P P PP RS + S + + + + T SG+ P PP S F + G
Sbjct: 1608 SSPFPNLPVPPWRSSKSTSPA-IASRLINTTTTVSGTSSPPPPPPSSSTFSSLASG 1662
>AL032644-11|CAN99705.1| 339|Caenorhabditis elegans Hypothetical
protein Y51H1A.1c protein.
Length = 339
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 124 CESC--AVQFSVFRHKRVCGECERYYCSRCLRRGGGSMCAPCRVL 252
C C + S F C +YYC+ C+ + GG + P RV+
Sbjct: 101 CAMCRKTIGGSTFSKFETCAIDSKYYCTECM-KSGGKVSIPARVV 144
>AL032644-10|CAD57710.1| 480|Caenorhabditis elegans Hypothetical
protein Y51H1A.1b protein.
Length = 480
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 124 CESC--AVQFSVFRHKRVCGECERYYCSRCLRRGGGSMCAPCRVL 252
C C + S F C +YYC+ C+ + GG + P RV+
Sbjct: 242 CAMCRKTIGGSTFSKFETCAIDSKYYCTECM-KSGGKVSIPARVV 285
>AL032644-9|CAA21673.1| 389|Caenorhabditis elegans Hypothetical
protein Y51H1A.1a protein.
Length = 389
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 124 CESC--AVQFSVFRHKRVCGECERYYCSRCLRRGGGSMCAPCRVL 252
C C + S F C +YYC+ C+ + GG + P RV+
Sbjct: 151 CAMCRKTIGGSTFSKFETCAIDSKYYCTECM-KSGGKVSIPARVV 194
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 506 CSQPYPAPPPPTRSCHNNSHSHVPGQPTSDRLTTSG 613
C P P PPPP C S +P +PT ++ SG
Sbjct: 63 CGIPPPPPPPPQCGCGRKKRS-LPEKPTFFGISASG 97
>Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical
protein VT23B5.2 protein.
Length = 931
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 124 CESCAVQFSVFRHKRVCGECERYYCSRCLR 213
C+ C +F++ K C C + +CS C R
Sbjct: 869 CDDCEHKFTLADRKHHCRNCGQIFCSTCSR 898
>Z92831-2|CAB07368.2| 861|Caenorhabditis elegans Hypothetical
protein F22G12.4 protein.
Length = 861
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 133 CAVQFSVFRHKRVCGECERYYCSRC 207
C +FS+ K C C R+ CS+C
Sbjct: 803 CGARFSLTSRKHHCRHCGRHVCSKC 827
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +2
Query: 506 CSQPYPAPPPPTRSCHNNSHSHVPGQPTSDRLTTSGSRXPGXXP-PRSERFXTTPGGE 676
C Q P PP P + + + PG+P +D GS P P P E P GE
Sbjct: 150 CPQGPPGPPGPPGAPGDPGEAGTPGRPGTD--AAPGSPGPRGPPGPAGEAGAPGPAGE 205
>Z49125-6|CAA88937.2| 776|Caenorhabditis elegans Hypothetical
protein C47G2.5a protein.
Length = 776
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 205 CLRRGGGSMCAPCRV-LSPVHYPEQTSLTSKFATFSASYIVKTYPPE 342
C R S CA SP+ +P + TS+ A+ S + TYP +
Sbjct: 595 CSERANSSSCAGISFETSPIKWPGEAEKTSEKASEPPSVVASTYPQQ 641
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +2
Query: 506 CSQPYPAPPPPTRSCHNNSHSHVPGQPTSDRLTTSGSRXPGXXP-PRSERFXTTPGGE 676
C Q P PP P + + + PG+P +D GS P P P E P GE
Sbjct: 145 CPQGPPGPPGPPGAPGDPGEAGTPGRPGTD--AAPGSPGPRGPPGPAGEAGAPGPAGE 200
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +2
Query: 506 CSQPYPAPPPPTRSCHNNSHSHVPGQPTSDRLTTSGSRXPGXXP-PRSERFXTTPGGE 676
C Q P PP P + + + PG+P +D GS P P P E P GE
Sbjct: 145 CPQGPPGPPGPPGAPGDPGEAGTPGRPGTD--AAPGSPGPRGPPGPAGEAGAPGPAGE 200
>AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical
protein VT23B5.2 protein.
Length = 931
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 124 CESCAVQFSVFRHKRVCGECERYYCSRCLR 213
C+ C +F++ K C C + +CS C R
Sbjct: 869 CDDCEHKFTLADRKHHCRNCGQIFCSTCSR 898
>Z75547-11|CAA99905.4| 394|Caenorhabditis elegans Hypothetical
protein R11D1.10a protein.
Length = 394
Score = 29.5 bits (63), Expect = 2.4
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = +1
Query: 124 CESCAVQFSVFRHKRVCGECERYYCSRCL 210
C +C ++S+ + C C +C +CL
Sbjct: 7 CTNCRTKYSLLNREAGCSNCALSFCKKCL 35
>Z74033-9|CAN99687.1| 228|Caenorhabditis elegans Hypothetical
protein F38B7.2b protein.
Length = 228
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 122 GILHSRPQTNTYHTDIKRFYRPIF 51
GI+ RP+T TYH DI + P F
Sbjct: 18 GIVRERPRTVTYHADISTNFYPRF 41
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 512 QPYPAPPPPTRSCHNNSHSHVP-GQPTSDR 598
Q P PPPP++ H +S +H P G+P R
Sbjct: 744 QQQPPPPPPSQFQHTDSIAHRPRGRPKGTR 773
>AF068713-12|AAC17802.1| 139|Caenorhabditis elegans Ground-like
(grd related) protein28 protein.
Length = 139
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 524 APPPPTRSCHNNSHSHVPGQPTSDRLTTSG 613
APPPP+ C +P +PT +++ SG
Sbjct: 35 APPPPSCGCGGRKKRSLPEKPTFYKISASG 64
>Z81110-9|CAB03261.2| 353|Caenorhabditis elegans Hypothetical
protein T01D3.1 protein.
Length = 353
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 485 LDVQPETCSQPYPAPPPPT-RSCHNNSHSH 571
+D Q ++CS P PAPP R+ N++H H
Sbjct: 119 IDAQVQSCSYP-PAPPSECHRAARNHNHRH 147
>Z81094-8|CAB03155.2| 353|Caenorhabditis elegans Hypothetical
protein T01D3.1 protein.
Length = 353
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 485 LDVQPETCSQPYPAPPPPT-RSCHNNSHSH 571
+D Q ++CS P PAPP R+ N++H H
Sbjct: 119 IDAQVQSCSYP-PAPPSECHRAARNHNHRH 147
>Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical
protein T13F2.3b protein.
Length = 1076
Score = 28.7 bits (61), Expect = 4.1
Identities = 25/96 (26%), Positives = 36/96 (37%), Gaps = 6/96 (6%)
Frame = +2
Query: 404 PASELSQ*EQSI---QFS*RXNSQHQ*VHKLDVQPETCSQPYPAPPPPTRSCHNNSHSHV 574
P + +Q +Q + Q + + +Q Q + Q +Q P P PP
Sbjct: 221 PQQQAAQWQQQMYARQAAAQAQAQAQAQAQAQAQQRAAAQRVPVPYPPGAYPPGMPGPMT 280
Query: 575 PGQPTSDRL---TTSGSRXPGXXPPRSERFXTTPGG 673
PG P TT GS PG PP + + P G
Sbjct: 281 PGYPAQAPAAPRTTPGSAGPGTGPPGTPQRPQYPQG 316
>Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical
protein T13F2.3a protein.
Length = 1074
Score = 28.7 bits (61), Expect = 4.1
Identities = 25/96 (26%), Positives = 36/96 (37%), Gaps = 6/96 (6%)
Frame = +2
Query: 404 PASELSQ*EQSI---QFS*RXNSQHQ*VHKLDVQPETCSQPYPAPPPPTRSCHNNSHSHV 574
P + +Q +Q + Q + + +Q Q + Q +Q P P PP
Sbjct: 219 PQQQAAQWQQQMYARQAAAQAQAQAQAQAQAQAQQRAAAQRVPVPYPPGAYPPGMPGPMT 278
Query: 575 PGQPTSDRL---TTSGSRXPGXXPPRSERFXTTPGG 673
PG P TT GS PG PP + + P G
Sbjct: 279 PGYPAQAPAAPRTTPGSAGPGTGPPGTPQRPQYPQG 314
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 494 QPETCSQPYPAPPPPTRSCHNNSHSHVPGQPTSDRLTTSGS 616
QP++ P P PPPP S +N S + S + +S S
Sbjct: 354 QPQSLVPPPPPPPPPPPSAASNGRSGYLPRSVSAAVISSAS 394
>Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical
protein F59A2.2 protein.
Length = 520
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +3
Query: 348 VEKEELVGLCVTHVNSPAYRRRSSRNENSPF---SSLKGLTVNINEFISSTFNLRPA 509
+ + +L+GL ++ SP+ RRR S +E+S S+L L +I ISS P+
Sbjct: 82 IPEADLLGLGLSSTESPSNRRRRSPSEDSIHSNESTLAALLQSIPNAISSALETIPS 138
>U41271-3|AAP31439.1| 577|Caenorhabditis elegans Hypothetical
protein C46H3.2b protein.
Length = 577
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +2
Query: 503 TCSQPYPAPPPPTRSC----HNNSHSHVPGQPTSDRLTTS 610
T S+P PAP P RSC +++ + + P Q +S TTS
Sbjct: 15 TFSKPVPAPAVPRRSCSIVQYHDINRNTPSQMSSFGRTTS 54
>U41271-2|AAA82444.3| 713|Caenorhabditis elegans Hypothetical
protein C46H3.2a protein.
Length = 713
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +2
Query: 503 TCSQPYPAPPPPTRSC----HNNSHSHVPGQPTSDRLTTS 610
T S+P PAP P RSC +++ + + P Q +S TTS
Sbjct: 151 TFSKPVPAPAVPRRSCSIVQYHDINRNTPSQMSSFGRTTS 190
>U13644-5|AAB52681.1| 451|Caenorhabditis elegans Hypothetical
protein F56D2.2 protein.
Length = 451
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +1
Query: 121 PCESCAVQFSVFR--HKRVCGECERYYCSRC 207
PC C+V HK C +C+ Y+C C
Sbjct: 338 PCPKCSVSIEKNEGCHKMHCTKCDTYFCWLC 368
>U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab
effector) protein 5 protein.
Length = 414
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 124 CESCAVQFSVFRHKRVCGECERYYCSRCLR 213
C +C F+ + K C C R +C CL+
Sbjct: 350 CSNCDTSFARVKVKPHCLHCGRIFCMNCLK 379
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 503 TCSQPYP-APPPPTRSCHNNSHSHVPGQPTSDRLTTSGSR-XPGXXPPRSER 652
T S P P PP P CH + + + G P T G + PG R ER
Sbjct: 256 TASSPGPPGPPGPPGVCHASQCTGIQGPPGEPGRTIIGPQGPPGEKGERGER 307
>Z83228-9|CAB05737.2| 539|Caenorhabditis elegans Hypothetical
protein F52F12.6 protein.
Length = 539
Score = 28.3 bits (60), Expect = 5.4
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -3
Query: 265 SGRVTAPGMVHTWSLHRDGGICC 197
+G + +PG ++WS+ R+G + C
Sbjct: 243 NGSIPSPGTGYSWSIRREGKLAC 265
>Z66498-5|CAA91294.2| 513|Caenorhabditis elegans Hypothetical
protein C26D10.6a protein.
Length = 513
Score = 28.3 bits (60), Expect = 5.4
Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 6/128 (4%)
Frame = -3
Query: 541 CRRWWCWIWL*AGLRLNV--ELMNSLMLTVXPLRELNGLFSLRELRRRYAGLFTCVTHRP 368
CR W +WL G LN+ + +L V R+L L Y L T H
Sbjct: 22 CRLPWTGVWLENGNELNITHNSIGNLGNCVHKSRDLYLLTIDTSRGDCYRCLITFPVHEN 81
Query: 367 TNSSFSTHPLVD---TF*RCRKH*RSRTLR*AMFARDSGRVTAP-GMVHTWSLHRDGGIC 200
+T + D + +C + + T +F +++ V P ++ + GIC
Sbjct: 82 VLHYKTTQCIFDPEMSLEKCSQLMSADTTMHTLFRKEAIPVPCPIEAPMNFTYQTNQGIC 141
Query: 199 CSSTSHIH 176
S TSH+H
Sbjct: 142 NSRTSHLH 149
>Z54327-14|CAA91124.2| 513|Caenorhabditis elegans Hypothetical
protein C26D10.6a protein.
Length = 513
Score = 28.3 bits (60), Expect = 5.4
Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 6/128 (4%)
Frame = -3
Query: 541 CRRWWCWIWL*AGLRLNV--ELMNSLMLTVXPLRELNGLFSLRELRRRYAGLFTCVTHRP 368
CR W +WL G LN+ + +L V R+L L Y L T H
Sbjct: 22 CRLPWTGVWLENGNELNITHNSIGNLGNCVHKSRDLYLLTIDTSRGDCYRCLITFPVHEN 81
Query: 367 TNSSFSTHPLVD---TF*RCRKH*RSRTLR*AMFARDSGRVTAP-GMVHTWSLHRDGGIC 200
+T + D + +C + + T +F +++ V P ++ + GIC
Sbjct: 82 VLHYKTTQCIFDPEMSLEKCSQLMSADTTMHTLFRKEAIPVPCPIEAPMNFTYQTNQGIC 141
Query: 199 CSSTSHIH 176
S TSH+H
Sbjct: 142 NSRTSHLH 149
>U67079-1|AAB40716.1| 539|Caenorhabditis elegans C2-HC type zinc
finger proteinC.e-MyT1 protein.
Length = 539
Score = 28.3 bits (60), Expect = 5.4
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -3
Query: 265 SGRVTAPGMVHTWSLHRDGGICC 197
+G + +PG ++WS+ R+G + C
Sbjct: 243 NGSIPSPGTGYSWSIRREGKLAC 265
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +2
Query: 497 PETCSQPYPAPPPPTRSC--HNNSHSHVPGQPTSDRLTTSGSR 619
P QPY AP PP S H Q SD T+ G+R
Sbjct: 597 PNQYQQPYGAPAPPGGSAYGHQQQQQQQQQQDYSDFYTSPGAR 639
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +2
Query: 497 PETCSQPYPAPPPPTRSC--HNNSHSHVPGQPTSDRLTTSGSR 619
P QPY AP PP S H Q SD T+ G+R
Sbjct: 597 PNQYQQPYGAPAPPGGSAYGHQQQQQQQQQQDYSDFYTSPGAR 639
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 23.8 bits (49), Expect(2) = 6.0
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = +2
Query: 515 PYPAPPPPTRSCHNNSHSHVP---GQPTSD 595
P PAP PT+ C + + P G P D
Sbjct: 148 PPPAPEAPTQCCGSQPYGRTPCRSGCPNGD 177
Score = 22.6 bits (46), Expect(2) = 6.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 497 PETCSQPYPAPPPP 538
P T + P P PPPP
Sbjct: 135 PPTPAAPPPPPPPP 148
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +2
Query: 497 PETCSQPYP---APPPPTRSCHNNSHSHVPGQPTSDRLTTSGSRXPGXXP 637
P T + P P APPPPT + P PT+++ T+ + P P
Sbjct: 178 PTTKAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTNKEVTTVAPVPKPAP 227
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/59 (30%), Positives = 22/59 (37%)
Frame = +2
Query: 497 PETCSQPYPAPPPPTRSCHNNSHSHVPGQPTSDRLTTSGSRXPGXXPPRSERFXTTPGG 673
P + P P PPPP R+ +P P R G PP R+ PGG
Sbjct: 291 PSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRY---PGG 346
>Z37983-5|CAA86059.2| 405|Caenorhabditis elegans Hypothetical
protein B0393.6 protein.
Length = 405
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = +1
Query: 106 RECKMPCESCAVQFSVFRHKRVCGECERYYCSRCLRR 216
R+ PC C Q+ V H C +C CL +
Sbjct: 9 RDIVRPCPGCETQYDVRLHAPHVLPCSHTFCLMCLSK 45
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/59 (30%), Positives = 22/59 (37%)
Frame = +2
Query: 497 PETCSQPYPAPPPPTRSCHNNSHSHVPGQPTSDRLTTSGSRXPGXXPPRSERFXTTPGG 673
P + P P PPPP R+ +P P R G PP R+ PGG
Sbjct: 301 PSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRY---PGG 356
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 7/52 (13%)
Frame = +2
Query: 230 CVHHAGCCHPSTI-PSKHRSPQSSR------PSVLPTSSKRIHQRMCRKGRV 364
CVH G CHP+ + S+ R Q S S P S R + +C K +
Sbjct: 2183 CVHFTGICHPNAVCNSESRQCQCSSGFSGNGVSCFPQKSCRTDKSVCAKNAI 2234
>AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical
protein H05C05.1b protein.
Length = 219
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 503 TCSQPYPAPPPPTRSCHNNSHSHVPGQPTSDRLTTSGSRXPG 628
T S + P PP + H+NS G+P+ T+ G R G
Sbjct: 14 TSSIDHLPPHPPHPTSHHNSRGGRGGRPSMKPYTSGGGRGGG 55
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 503 TCSQPYPAPPPPTRSCHNNSHSHVPGQPTSDRLTTSGSRXPG 628
T S + P PP + H+NS G+P+ T+ G R G
Sbjct: 518 TSSIDHLPPHPPHPTSHHNSRGGRGGRPSMKPYTSGGGRGGG 559
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +2
Query: 494 QPETCSQPYPAPPPPTRSCHNNSHSHVP----GQPTSDRLTTSGSRXPGXXPPRSER 652
+P+ C P P PPPP + P G P+ + +GS PG +S+R
Sbjct: 32 RPQQCCCPPPPPPPPCGGGYEAPPPPPPPSYAGGPSYAGPSYAGSYGPGPYRAKSKR 88
>Z49125-7|CAN99660.1| 717|Caenorhabditis elegans Hypothetical
protein C47G2.5b protein.
Length = 717
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 205 CLRRGGGSMCAPCRV-LSPVHYPEQTSLTSKFATFSASYIVKTYPPED 345
C R S CA SP+ +P + TS+ A+ S + PP++
Sbjct: 595 CSERANSSSCAGISFETSPIKWPGEAEKTSEKASEPPSVVANMAPPKE 642
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 27.5 bits (58), Expect = 9.5
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = +2
Query: 491 VQPETCSQPYPAPPPPTRSCHNNSHSHVPGQPTSDRLTTSGSRXPGXXPPRS 646
+Q + S P P PPPP C + HV P S T+S P PP S
Sbjct: 757 IQQQQSSIPPPPPPPPPPHC-EPTMVHVEFTPPS---TSSVPPPPPPLPPIS 804
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 27.5 bits (58), Expect = 9.5
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = +2
Query: 491 VQPETCSQPYPAPPPPTRSCHNNSHSHVPGQPTSDRLTTSGSRXPGXXPPRS 646
+Q + S P P PPPP C + HV P S T+S P PP S
Sbjct: 757 IQQQQSSIPPPPPPPPPPHC-EPTMVHVEFTPPS---TSSVPPPPPPLPPIS 804
>AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical
protein F39G3.3 protein.
Length = 520
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +3
Query: 264 LSRANIAHLKVRDLQCFLHRQNVSTRGCVEKEELV 368
LS IA KVR+LQ LH++N+ G VE+ +L+
Sbjct: 86 LSNYEIAQQKVRELQEELHQKNI---GLVEEAKLL 117
>AC025715-5|AAP13755.1| 281|Caenorhabditis elegans Hypothetical
protein Y38F2AR.3 protein.
Length = 281
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 257 PSTIPSKHRSPQSSRPSVLPTSS 325
PS+IP + P + PS +PT+S
Sbjct: 23 PSSIPGRQAPPPHTEPSTVPTTS 45
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 25.0 bits (52), Expect(2) = 9.8
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 8/59 (13%)
Frame = +2
Query: 515 PYPAPPPPTRSCHNN--------SHSHVPGQPTSDRLTTSGSRXPGXXPPRSERFXTTP 667
P PAPPPP+R + + S S P P T S P PP E+ + P
Sbjct: 463 PKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPALEQEISGP 521
Score = 20.6 bits (41), Expect(2) = 9.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 491 VQPETCSQPYPAPPP 535
V+P+T ++ P PPP
Sbjct: 424 VEPKTPTRVAPPPPP 438
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,019,863
Number of Sequences: 27780
Number of extensions: 366919
Number of successful extensions: 1831
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1792
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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