Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0888
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.71 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   0.94 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   0.94 
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   2.9  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.9  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   2.9  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.9  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   3.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   6.7  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +3

Query: 84  TEPQSPTPNSKTIFTTASSLPIT 152
           T   +PT +S+++ T+ SS+P T
Sbjct: 89  TSTSNPTYSSRSVMTSCSSVPTT 111


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 10/50 (20%), Positives = 25/50 (50%)
 Frame = +1

Query: 208 HKCRKQTHTKQXDXLQEYAYQLWXQGSXXIVRXCFPVEFTLIFAXNNIKL 357
           HK     H +  D ++ ++ Q+  + +       FP++++L+F+   + L
Sbjct: 668 HKIETNDH-EIIDKIEMFSLQILNERAGFSAAGFFPIDYSLVFSETKLLL 716



 Score = 24.2 bits (50), Expect = 0.94
 Identities = 10/44 (22%), Positives = 23/44 (52%)
 Frame = +1

Query: 208  HKCRKQTHTKQXDXLQEYAYQLWXQGSXXIVRXCFPVEFTLIFA 339
            HK     H +  D ++ ++ Q+  + +       FP+++TL+F+
Sbjct: 1046 HKIETNEH-EIIDKIEMFSLQILNERAEFNAAGFFPIDYTLVFS 1088


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 10/44 (22%), Positives = 23/44 (52%)
 Frame = +1

Query: 208 HKCRKQTHTKQXDXLQEYAYQLWXQGSXXIVRXCFPVEFTLIFA 339
           HK     H +  D ++ ++ Q+  + +       FP+++TL+F+
Sbjct: 327 HKIETNEH-EIIDKIEMFSLQILNERAEFNAAGFFPIDYTLVFS 369


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 564 QNHMXYGGQQ 593
           Q HM YGGQQ
Sbjct: 185 QQHMMYGGQQ 194


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 229 HTKQXDXLQEYAYQLWXQGSXXIVRXCFPVEFTLIFA 339
           H    + +Q Y+ QL  Q     V   F V++TL+++
Sbjct: 333 HMDLENNVQSYSLQLLHQKVQFSVLGFFVVDYTLLYS 369


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/50 (18%), Positives = 26/50 (52%)
 Frame = +1

Query: 208 HKCRKQTHTKQXDXLQEYAYQLWXQGSXXIVRXCFPVEFTLIFAXNNIKL 357
           H+ + + H    D ++ ++ Q+  +         FP+ +TL+F+  ++++
Sbjct: 347 HQIQTEDHDI-IDEIEMFSLQIANEQVEFNAAGFFPINYTLVFSVRSVQV 395


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 564 QNHMXYGGQQ 593
           Q HM YGGQQ
Sbjct: 187 QQHMMYGGQQ 196


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +1

Query: 349 IKLMXKRDGLAXTLRDXSNNDGRLAYGDXKDKTSPKV 459
           IKL+ +++       D +  + +   G+ KDK  PK+
Sbjct: 211 IKLVVEKEREKELSDDEAEEEKKEEEGEDKDKDKPKI 247


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 381 FXVARXQQQRWQTCLR 428
           F   R  QQRWQ  +R
Sbjct: 174 FPFYRQNQQRWQNSIR 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,447
Number of Sequences: 336
Number of extensions: 1679
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)