Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0888
         (652 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    26   0.90 
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    26   0.90 
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    26   1.2  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   2.7  
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    24   3.6  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   3.6  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   8.4  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   8.4  

>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 26.2 bits (55), Expect = 0.90
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +3

Query: 363 QARRSCFXVARXQQQRWQTCLRRXQGQDE 449
           Q  + C    R +    QT LRR Q QDE
Sbjct: 66  QCEKCCLTAERQRVMALQTALRRAQTQDE 94


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 26.2 bits (55), Expect = 0.90
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +3

Query: 363 QARRSCFXVARXQQQRWQTCLRRXQGQDE 449
           Q  + C    R +    QT LRR Q QDE
Sbjct: 66  QCEKCCLTAERQRVMALQTALRRAQTQDE 94


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 17/68 (25%), Positives = 29/68 (42%)
 Frame = +3

Query: 399 QQQRWQTCLRRXQGQDESXSQLEVRSSXGEQQGLLQDVNTQRNXYLTLSVXTTPAQNHMX 578
           QQQ+ Q   ++ Q Q +   Q +      +QQ   Q +   +    T  V   P+Q H  
Sbjct: 190 QQQQQQQQQQQQQQQQQQRQQQQQCQQQRQQQPQQQQLQQPQQQLWTTVVRGRPSQRHRQ 249

Query: 579 YGGQQRRK 602
              QQ+++
Sbjct: 250 PQQQQQQQ 257



 Score = 23.4 bits (48), Expect = 6.3
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +3

Query: 336 RRKQH*ADVQARRSCFXVARXQQQRWQTCLRRXQGQDESXSQLEVRSSXGEQQ 494
           +++QH    Q ++      + QQQR Q   ++ Q Q +   Q + R    +QQ
Sbjct: 307 QQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQ 359


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = +1

Query: 346 NIKLMXKRDGLAXTLRDXSNNDGRLAYGDXKDKTSPKVSWKFVP 477
           N+K+  K+  +    R  + ND  +  G  K   S K+ W   P
Sbjct: 680 NVKIETKKIDIKAAPRIEAKNDAYIPKGGDKKIISTKLQWNAKP 723


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 372 RSCFXVARXQQQRWQTCLRRXQGQDE 449
           + C    R +    QT LRR Q QDE
Sbjct: 69  KCCLTAERQRVMALQTALRRAQTQDE 94


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 372 RSCFXVARXQQQRWQTCLRRXQGQDE 449
           + C    R +    QT LRR Q QDE
Sbjct: 69  KCCLTAERQRVMALQTALRRAQTQDE 94


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 18/65 (27%), Positives = 23/65 (35%)
 Frame = +3

Query: 399 QQQRWQTCLRRXQGQDESXSQLEVRSSXGEQQGLLQDVNTQRNXYLTLSVXTTPAQNHMX 578
           QQQR Q   ++ Q Q +   Q   +    EQQ L   V  +R           P Q    
Sbjct: 276 QQQRVQQQNQQHQRQQQQQQQQRQQQQQQEQQELWTTVVRRRQNTQQQQQSNQPQQQQQQ 335

Query: 579 YGGQQ 593
            G  Q
Sbjct: 336 TGRYQ 340


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 190 QEERSHHKCRKQTHTKQXD 246
           +EE+ H +C KQ+ T + +
Sbjct: 483 REEKHHERCAKQSETTRIE 501


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 465,677
Number of Sequences: 2352
Number of extensions: 6771
Number of successful extensions: 35
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)