Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0888
         (652 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA...    36   0.048
AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA...    31   1.8  
AB190179-1|BAD44692.1|  841|Drosophila melanogaster transcriptio...    30   2.4  
AY051412-1|AAK92836.1|  555|Drosophila melanogaster GH09241p pro...    29   5.5  
AE014297-2164|AAF55286.3|  555|Drosophila melanogaster CG6126-PA...    29   5.5  
BT022576-1|AAY54992.1|  657|Drosophila melanogaster IP11918p pro...    29   7.2  
BT022512-1|AAY54928.1|  420|Drosophila melanogaster IP11818p pro...    29   7.2  
AE014135-125|AAF59320.2|  628|Drosophila melanogaster CG11360-PA...    29   7.2  

>AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA
            protein.
          Length = 3146

 Score = 35.9 bits (79), Expect = 0.048
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
 Frame = +2

Query: 17   PDAQKMKTVQVILCLFVASLYANGTSVSDSKLEDDLYNSILVADYDN--AVEKSKQIYED 190
            P  Q+ +  Q +  +  A+  A   S S+SK EDD+  S          A +K KQ  ED
Sbjct: 1752 PQQQQQQQQQPVTPVSAATAPAATPSSSESK-EDDVSASSTTTPTTRTPAKDKPKQSRED 1810

Query: 191  KKSEVITNVVNKLIRNNXXNCRSTPTSSGXK 283
            +K E I   + K+ +      + T  SSG K
Sbjct: 1811 RKLEAILRAIEKMEKQEARGKKDTRQSSGGK 1841


>AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA
           protein.
          Length = 1976

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +3

Query: 81  PTEPQSPTPNSKTIFTTASSLPITTMPLKKANRSTRTRRAKSS 209
           P   + P P +    TT +  P +T P KK  + TRT    SS
Sbjct: 298 PPTQEEPVPATTESTTTTTQAPASTTPKKKKRKPTRTPGTGSS 340


>AB190179-1|BAD44692.1|  841|Drosophila melanogaster transcription
           factor dRFX2 protein.
          Length = 841

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
 Frame = +2

Query: 41  VQVILCLFVASLYANGTS--VSDSKLEDDLYNSILVADYDNAVEKSKQIYEDKKSEVI 208
           ++VI  +     +++G+S  +S+   +D  YN     D++N +E+S  I ++KK ++I
Sbjct: 666 IRVITAIRKVIFFSSGSSKLLSNFSNKDVFYNEWHSLDFENIIEESFLIPDEKKPQII 723


>AY051412-1|AAK92836.1|  555|Drosophila melanogaster GH09241p
           protein.
          Length = 555

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 29  KMKTVQVILCLFVASLYANGTSVSDSKLEDDLY 127
           +MKT+ V LC F  SL   G S+S  KL  + Y
Sbjct: 333 RMKTLNVCLCWFANSLVYYGLSLSAGKLYGNPY 365


>AE014297-2164|AAF55286.3|  555|Drosophila melanogaster CG6126-PA
           protein.
          Length = 555

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 29  KMKTVQVILCLFVASLYANGTSVSDSKLEDDLY 127
           +MKT+ V LC F  SL   G S+S  KL  + Y
Sbjct: 333 RMKTLNVCLCWFANSLVYYGLSLSAGKLYGNPY 365


>BT022576-1|AAY54992.1|  657|Drosophila melanogaster IP11918p
           protein.
          Length = 657

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +2

Query: 110 LEDDLYNSILVADYDNAVEKSKQIYEDKKSEVITNVVN--KLIR-NNXXNC 253
           L DDL + IL + Y N+V  S Q Y +   + + NV N  KL++ ++  NC
Sbjct: 364 LNDDLNSEILSSIYKNSV-PSTQEYANNSMKTVVNVSNSVKLVQGHHTGNC 413


>BT022512-1|AAY54928.1|  420|Drosophila melanogaster IP11818p
           protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +2

Query: 110 LEDDLYNSILVADYDNAVEKSKQIYEDKKSEVITNVVN--KLIR-NNXXNC 253
           L DDL + IL + Y N+V  S Q Y +   + + NV N  KL++ ++  NC
Sbjct: 127 LNDDLNSEILSSIYKNSV-PSTQEYANNSMKTVVNVSNSVKLVQGHHTGNC 176


>AE014135-125|AAF59320.2|  628|Drosophila melanogaster CG11360-PA
           protein.
          Length = 628

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +2

Query: 110 LEDDLYNSILVADYDNAVEKSKQIYEDKKSEVITNVVN--KLIR-NNXXNC 253
           L DDL + IL + Y N+V  S Q Y +   + + NV N  KL++ ++  NC
Sbjct: 335 LNDDLNSEILSSIYKNSV-PSTQEYANNSMKTVVNVSNSVKLVQGHHTGNC 384


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,493,865
Number of Sequences: 53049
Number of extensions: 321426
Number of successful extensions: 1253
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)