Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0888
(652 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g44050.1 68416.m04718 kinesin motor protein-related KLP2 prot... 33 0.12
At3g30550.1 68416.m03866 hypothetical protein includes At2g05890... 32 0.38
At3g27710.1 68416.m03460 zinc finger protein-related contains si... 29 3.5
At3g18590.1 68416.m02363 plastocyanin-like domain-containing pro... 29 3.5
At4g31110.1 68417.m04415 wall-associated kinase, putative simila... 28 4.7
At4g31100.1 68417.m04414 wall-associated kinase, putative 28 4.7
At4g13040.1 68417.m02035 AP2 domain-containing transcription fac... 28 4.7
At4g26630.1 68417.m03837 expressed protein 28 6.2
At1g19390.1 68414.m02412 wall-associated kinase, putative simila... 28 6.2
>At3g44050.1 68416.m04718 kinesin motor protein-related KLP2
protein, Xenopus laevis, PIR:T30335
Length = 1229
Score = 33.5 bits (73), Expect = 0.12
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +2
Query: 20 DAQKMKT-VQVILCLFVASLYANGTSVSDSKLEDDLYNSI--LVADYDNAVEKSKQIYED 190
D ++KT VQ I C+ A+ T++ SK DDL I L+ D + +E +Q+ E+
Sbjct: 711 DQMEVKTMVQAIACVSQREAEAHETAIKLSKENDDLRQKIKVLIEDNNKLIELYEQVAEE 770
Query: 191 KKSEVITNVVNKLIRNN 241
S + NN
Sbjct: 771 NSSRAWGKIETDSSSNN 787
>At3g30550.1 68416.m03866 hypothetical protein includes At2g05890,
At4g07450, At3g30630, At3g43100, At2g09960, At3g30550,
At1g39430, At2g10460, At4g03640, At5g35250
Length = 509
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 29 KMKTVQVILCLFVASLYANGTSVSDSKL-EDDLYNSILVADYDNAVEKSKQIYEDKKSEV 205
K KT Q +LC+ +++ S + +++ D++ + I+ DYD V+ S I ++ S +
Sbjct: 398 KGKTFQFLLCVQRENIFGGYDSFTVARVYTDNIADEIVQEDYDAYVDPSSLISIEQDSLM 457
Query: 206 ITNVVN 223
+TN V+
Sbjct: 458 LTNGVD 463
>At3g27710.1 68416.m03460 zinc finger protein-related contains
similarity to zinc finger proteins and Pfam domain,
PF01485: IBR domain
Length = 537
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +2
Query: 77 YANGTSVSDSKLEDDLYNSILVADYDNAVEKSKQIYEDKKSEVITNVVNKLIRNNXXNCR 256
Y + KLED L SIL N+ K ++++ K+ +T+ VN+L + +
Sbjct: 353 YRYKAHIDSLKLEDKLRKSILEKAVSNSETKDQKVF--KEYSWVTDAVNRLFISRRILSQ 410
Query: 257 STP 265
S P
Sbjct: 411 SYP 413
>At3g18590.1 68416.m02363 plastocyanin-like domain-containing
protein
Length = 188
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 93 QSPTPNSKTIFTTASSLPITTMPLKKAN 176
+SP P+S + +++SSLP +T KK+N
Sbjct: 134 ESPPPSSSSSSSSSSSLPASTPKAKKSN 161
>At4g31110.1 68417.m04415 wall-associated kinase, putative similar
to wall-associated kinase 1, Arabidopsis thaliana,
gb:AJ009696
Length = 756
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 122 LYNSILVADYDNAVEKSKQIYEDKKSEVITNVV 220
+Y +LV AV+KSK I EDK E I VV
Sbjct: 430 VYKGMLVDGRTVAVKKSKVIDEDKLQEFINEVV 462
>At4g31100.1 68417.m04414 wall-associated kinase, putative
Length = 786
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 122 LYNSILVADYDNAVEKSKQIYEDKKSEVITNVV 220
+Y +LV AV+KSK I EDK E I VV
Sbjct: 458 VYKGMLVDGRTVAVKKSKVIDEDKLQEFINEVV 490
>At4g13040.1 68417.m02035 AP2 domain-containing transcription factor
family protein contains Pfam profile PF00847: AP2 domain
Length = 226
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 99 PTPNSKTIFTTASSLPITTMPLKKANRSTRTRRAKSSQMS*TNSY 233
P PN++ + + +TT+ ++K R+RR +S M + Y
Sbjct: 36 PNPNARAAYNPGPAETVTTVIVEKKAIEERSRRTRSKHMHFRSDY 80
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 95 VSDSKLEDDLYNSILVADYDNAVEKSKQIYEDKKSEVITNVVNKLIRNNXXNCRSTPTSS 274
V +SK+ED+ S + DN +SK ED+K E + ++ + R TSS
Sbjct: 235 VDESKVEDEKEGS--EDENDNEKVESKDAKEDEKEETNDDKEDEKEESKGSKKRGKGTSS 292
Query: 275 GXK 283
G K
Sbjct: 293 GGK 295
>At1g19390.1 68414.m02412 wall-associated kinase, putative similar
to GB:CAB42872 from [Arabidopsis thaliana] (Plant Mol.
Biol. 39 (6), 1189-1196 (1999))
Length = 788
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 122 LYNSILVADYDNAVEKSKQIYEDKKSEVITNVV 220
+Y +LV AV+KSK + EDK E I VV
Sbjct: 465 VYKGMLVDGRTVAVKKSKVVDEDKLEEFINEVV 497
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,594,925
Number of Sequences: 28952
Number of extensions: 143514
Number of successful extensions: 477
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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