Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0884
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.5  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            23   2.5  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   2.5  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   3.3  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 246 NFQGPQRVSGHRRKC 202
           NF GP R++   R+C
Sbjct: 601 NFHGPHRLAARSRRC 615


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 246 NFQGPQRVSGHRRKC 202
           NF GP R++   R+C
Sbjct: 493 NFHGPHRLAARSRRC 507


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +1

Query: 1   GFLFRNPAAEPFQ*SFPRL*KRVFDGVTQSGLKTPPRG 114
           GF+   P+   F  + P L   +  G + S   TPP G
Sbjct: 59  GFINSQPSMAEFMTALPHLSGDMTHGASISPQNTPPAG 96


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +1

Query: 1   GFLFRNPAAEPFQ*SFPRL*KRVFDGVTQSGLKTPPRG 114
           GF+   P+   F  + P L   +  G + S   TPP G
Sbjct: 59  GFINSQPSMAEFMTALPHLSGDMTHGASISPQNTPPAG 96


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 6/28 (21%), Positives = 17/28 (60%)
 Frame = +3

Query: 393 LXTGACRVXTGSGCCRCRVWSMFVRYVR 476
           +  G   +  G+GC R ++  ++++++R
Sbjct: 741 IIVGTLMMVLGTGCVRIKITGVWLKFLR 768


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,760
Number of Sequences: 336
Number of extensions: 3157
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)