Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0882
(479 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 113 2e-26
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 112 2e-26
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 112 2e-26
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 64 8e-12
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 63 2e-11
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 54 8e-09
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 35 0.006
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 32 0.052
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 32 0.052
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 31 0.090
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 31 0.12
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 29 0.28
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.28
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 28 0.84
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 28 0.84
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 1.9
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 2.6
SPAC4D7.09 |tif223||translation initiation factor eIF2B|Schizosa... 26 2.6
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 25 4.5
SPCC1442.02 ||SPCC1450.18|DUF1760 family protein|Schizosaccharom... 25 7.8
SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 7.8
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 113 bits (271), Expect = 2e-26
Identities = 51/57 (89%), Positives = 53/57 (92%)
Frame = +1
Query: 85 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEAG 255
GITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAG
Sbjct: 70 GITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAG 126
Score = 83.4 bits (197), Expect = 2e-17
Identities = 42/64 (65%), Positives = 49/64 (76%)
Frame = +3
Query: 255 ISKNGQTREHALLAFTLGVKQLIVGXNKMDSTEPPYSXPRFEXIKKEVXSYIKKIGXNPA 434
ISK+GQTREHALLA+TLGVKQLIV NKMD+T +S RFE I KE ++IKK+G NP
Sbjct: 127 ISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPK 184
Query: 435 AVAF 446
V F
Sbjct: 185 TVPF 188
Score = 50.0 bits (114), Expect = 2e-07
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +2
Query: 5 EKEAQEMGKXSFKYAWVLDKLKAER 79
EKEA E+GK SFKYAWVLDKLKAER
Sbjct: 43 EKEATELGKGSFKYAWVLDKLKAER 67
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 112 bits (270), Expect = 2e-26
Identities = 50/57 (87%), Positives = 53/57 (92%)
Frame = +1
Query: 85 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEAG 255
GITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAG
Sbjct: 70 GITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAG 126
Score = 83.4 bits (197), Expect = 2e-17
Identities = 42/64 (65%), Positives = 49/64 (76%)
Frame = +3
Query: 255 ISKNGQTREHALLAFTLGVKQLIVGXNKMDSTEPPYSXPRFEXIKKEVXSYIKKIGXNPA 434
ISK+GQTREHALLA+TLGVKQLIV NKMD+T +S RFE I KE ++IKK+G NP
Sbjct: 127 ISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPK 184
Query: 435 AVAF 446
V F
Sbjct: 185 TVPF 188
Score = 50.0 bits (114), Expect = 2e-07
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +2
Query: 5 EKEAQEMGKXSFKYAWVLDKLKAER 79
EKEA E+GK SFKYAWVLDKLKAER
Sbjct: 43 EKEATELGKGSFKYAWVLDKLKAER 67
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 112 bits (270), Expect = 2e-26
Identities = 50/57 (87%), Positives = 53/57 (92%)
Frame = +1
Query: 85 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEAG 255
GITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAG
Sbjct: 70 GITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAG 126
Score = 83.4 bits (197), Expect = 2e-17
Identities = 42/64 (65%), Positives = 49/64 (76%)
Frame = +3
Query: 255 ISKNGQTREHALLAFTLGVKQLIVGXNKMDSTEPPYSXPRFEXIKKEVXSYIKKIGXNPA 434
ISK+GQTREHALLA+TLGVKQLIV NKMD+T +S RFE I KE ++IKK+G NP
Sbjct: 127 ISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPK 184
Query: 435 AVAF 446
V F
Sbjct: 185 TVPF 188
Score = 50.0 bits (114), Expect = 2e-07
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +2
Query: 5 EKEAQEMGKXSFKYAWVLDKLKAER 79
EKEA E+GK SFKYAWVLDKLKAER
Sbjct: 43 EKEATELGKGSFKYAWVLDKLKAER 67
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 64.5 bits (150), Expect = 8e-12
Identities = 31/59 (52%), Positives = 37/59 (62%)
Frame = +1
Query: 85 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEAGSL 261
G+T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V + FE G L
Sbjct: 240 GVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFL 298
Score = 48.0 bits (109), Expect = 7e-07
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +3
Query: 261 KNGQTREHALLAFTLGVKQLIVGXNKMDSTEPPYSXPRFEXIKKEVXSY-IKKIGXNPAA 437
+NGQTREHA L LG+ +++V NK+D +S RF+ IK V + IK +G +
Sbjct: 299 ENGQTREHAYLLRALGISEIVVSVNKLDLMS--WSEDRFQEIKNIVSDFLIKMVGFKTSN 356
Query: 438 VAF 446
V F
Sbjct: 357 VHF 359
Score = 31.9 bits (69), Expect = 0.052
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 2 VEKEAQEMGKXSFKYAWVLDKLKAER 79
+ EA GK SF YAW+LD + ER
Sbjct: 212 LHNEAANSGKGSFSYAWLLDTTEEER 237
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 62.9 bits (146), Expect = 2e-11
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = +1
Query: 85 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEAG 255
G T+++ FET +++DAPGH+ ++ NMI G SQAD VL++ A GEFEAG
Sbjct: 301 GKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAG 357
Score = 45.6 bits (103), Expect = 4e-06
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +3
Query: 261 KNGQTREHALLAFTLGVKQLIVGXNKMDSTEPPYSXPRFEXIKKEVXSYIKKI 419
+ GQTREHA+LA T G+ L+V NKMD +S R++ ++ +++++
Sbjct: 360 RGGQTREHAVLARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRV 412
Score = 30.7 bits (66), Expect = 0.12
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 2 VEKEAQEMGKXSFKYAWVLDKLKAER 79
+E+EA+E GK S+ +W LD ER
Sbjct: 273 IEREAKEAGKESWYLSWALDSTSEER 298
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 54.4 bits (125), Expect = 8e-09
Identities = 24/53 (45%), Positives = 35/53 (66%)
Frame = +1
Query: 85 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGE 243
GITI A ++ET+ + +D PGH D+IKNMITG + D A+++V A G+
Sbjct: 101 GITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQ 153
Score = 40.3 bits (90), Expect = 1e-04
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +3
Query: 270 QTREHALLAFTLGVKQLIVGXNKMDSTEP 356
QTREH LLA +GVKQ++V NK+D EP
Sbjct: 156 QTREHLLLARQVGVKQIVVYINKVDMVEP 184
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 35.1 bits (77), Expect = 0.006
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 85 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 240
GITI+ A F + +ID PGH DF + + D AV I+ G
Sbjct: 78 GITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAG 129
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 31.9 bits (69), Expect = 0.052
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 115 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 240
FE S Y + IID PGH DF + D AVL++ A +G
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSG 181
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 31.9 bits (69), Expect = 0.052
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 85 GITIDIALWK--FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 240
GIT I + F+ ++T +D PGH F G + AD VL+V G
Sbjct: 203 GITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 31.1 bits (67), Expect = 0.090
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 106 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 240
++ + Y + +ID PGH DF ++ + + +L+V A G
Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.7 bits (66), Expect = 0.12
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 130 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 240
Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 29.5 bits (63), Expect = 0.28
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 133 YVTIIDAPGHRDFIKNMITGTSQADCAVLIV 225
+V+ +D PGH + M+ G + D A+L++
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLI 139
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.28
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 142 IIDAPGHRDFIKNMITGTSQADCAVLIV 225
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 0.84
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 130 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 225
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 0.84
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 130 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 225
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 26.6 bits (56), Expect = 1.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 145 IDAPGHRDFIKNMITGTSQADCAVLIV 225
ID PGH DF+ + + +D VL+V
Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 26.2 bits (55), Expect = 2.6
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 88 ITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 180
+ I+I + E +++ T+ID PG DFI N
Sbjct: 71 VEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPAC4D7.09 |tif223||translation initiation factor
eIF2B|Schizosaccharomyces pombe|chr 1|||Manual
Length = 468
Score = 26.2 bits (55), Expect = 2.6
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = -3
Query: 219 EHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDCDTTSRSAFSLSNTQAYL 40
EH+A+ L S +L IS R N GNI L S + + S + L+ + A
Sbjct: 5 EHAALPLASS-PSILGPISGGR--NRGNIQLQSIPIEFQAVVFAGFGNSLYPLTGSDALP 61
Query: 39 KDXLPI 22
K LPI
Sbjct: 62 KALLPI 67
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.4 bits (53), Expect = 4.5
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +2
Query: 134 MLPSLMLLDTEISSRT*SQEPLRLIALCSSXLPVPVNSKLDL*ERSNP 277
+L L +L E+S R E LR I L S +P P N+ + E NP
Sbjct: 1196 LLQCLKML-LEVSDRKLIVEKLRPILLPSFEIPEPCNTATSVQELINP 1242
>SPCC1442.02 ||SPCC1450.18|DUF1760 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 562
Score = 24.6 bits (51), Expect = 7.8
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -3
Query: 117 ELPESNIDCDTTSRSAFSLSNTQAYLKDXLPISWA 13
EL + +CD + S+ N YL LP SW+
Sbjct: 228 ELSGATTNCDKLDTLSKSIINIFDYLLSHLPESWS 262
>SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 96
Score = 24.6 bits (51), Expect = 7.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 189 CDHVLDEISVSRSINDGNIVLASFEL 112
CDH+L IS SR G + FEL
Sbjct: 23 CDHLLQYISNSRDSKAGLKIFLVFEL 48
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,738,892
Number of Sequences: 5004
Number of extensions: 29505
Number of successful extensions: 116
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 184020746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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